RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 MCTP2Q6DN12 878 aa4.52□□□□□ -1.69
R3HDM1-220ENST00000628915 ZCCHC8Q6NZY4 707 aaKnown RBP4.52□□□□□ -1.69
R3HDM1-220ENST00000628915 PROSER2Q86WR7 435 aaPredicted RBP4.52□□□□□ -1.69
R3HDM1-220ENST00000628915 TRIM42Q8IWZ5 723 aa4.52□□□□□ -1.69
R3HDM1-220ENST00000628915 MS4A3Q96HJ5 214 aa4.52□□□□□ -1.69
R3HDM1-220ENST00000628915 TCHPQ9BT92 498 aa4.52□□□□□ -1.69
R3HDM1-220ENST00000628915 CCDC39Q9UFE4 941 aa4.52□□□□□ -1.69
R3HDM1-220ENST00000628915 SYNRGQ9UMZ2 1314 aa4.52□□□□□ -1.69
R3HDM1-220ENST00000628915 INO80Q9ULG1 1556 aaPredicted RBP4.52□□□□□ -1.69
R3HDM1-220ENST00000628915 CROCC2H7BZ55 1655 aa4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 FYB1O15117 783 aa4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 GALR2O43603 387 aaPredicted RBP4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 TIE1P35590 1138 aa4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 LARP1BQ659C4 914 aaKnown RBP4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 CCDC80Q76M96 950 aa4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 MYRIPQ8NFW9 859 aa4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 USP33Q8TEY7 942 aa4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 WHAMMQ8TF30 809 aa4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 FEZ1Q99689 392 aa4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 POLR3CQ9BUI4 534 aaPredicted RBP4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 AS3MTQ9HBK9 375 aa4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 KIAA1522Q9P206 1035 aaPredicted RBP4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 PCDHB13Q9Y5F0 798 aa4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 IBTKQ9P2D0 1353 aaPredicted RBP4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 RNF17Q9BXT8 1623 aaKnown RBP4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 PLIN1O60240 522 aa4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 SASH1O94885 1247 aa4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 LDHCP07864 332 aa4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 LRPPRCP42704 1394 aaKnown RBP4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 MAGEA8P43361 318 aa4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 ZC3H6P61129 1189 aaKnown RBP4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 TMED1Q13445 227 aa4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 ZMYM3Q14202 1370 aa4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 KCTD2Q14681 263 aa4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 SYCP1Q15431 976 aa4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 C10orf62Q5T681 223 aaPredicted RBP4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 XIRP1Q702N8 1843 aaKnown RBP4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 CDC37L1Q7L3B6 337 aa4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 ZNF467Q7Z7K2 595 aaPredicted RBP4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 PREX1Q8TCU6 1659 aa4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 CTNNBL1Q8WYA6 563 aaPredicted RBP4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 NACA2Q9H009 215 aa4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 SEL1LQ9UBV2 794 aa4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 CFAP45Q9UL16 551 aa4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 SMTNL1A8MU46 457 aa4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 IL4RP24394 825 aa4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 GJA8P48165 433 aa4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 NFE2L2Q16236 605 aa4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 RNF187Q5TA31 235 aaPredicted RBP4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 DUSP27Q5VZP5 1158 aa4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 FAAH2Q6GMR7 532 aa4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 ZKSCAN5Q9Y2L8 839 aa4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.51□□□□□ -1.69
R3HDM1-220ENST00000628915 EIF3AQ14152 1382 aaKnown RBP4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 KIF7Q2M1P5 1343 aa4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 TPPPO94811 219 aa4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 PPM1FP49593 454 aaPredicted RBP4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 GRM1Q13255 1194 aa4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 NBPF8Q3BBV2 869 aa4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 AMOTQ4VCS5 1084 aa4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 ARHGEF25Q86VW2 580 aa4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.5□□□□□ -1.696e-8■■■■■ 40
R3HDM1-220ENST00000628915 IFT122Q9HBG6 1241 aa4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 DIAPH3Q9NSV4 1193 aa4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 TRIM17Q9Y577 477 aa4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 ARHGEF12Q9NZN5 1544 aa4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 INSRP06213 1382 aa4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 GIGYF1O75420 1035 aaPredicted RBP4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 TPP2P29144 1249 aaPredicted RBP4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 SART3Q15020 963 aaKnown RBP4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 SKIV2LQ15477 1246 aaKnown RBP4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 ZRSR1Q15695 479 aaKnown RBP4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 TSNAXIP1Q2TAA8 658 aa4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 FILIP1LQ4L180 1135 aa4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 C4orf46Q504U0 113 aa4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 SLF2Q8IX21 1173 aa4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 GBP7Q8N8V2 638 aaPredicted RBP4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 SLC39A7Q92504 469 aa4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 TBC1D2Q9BYX2 928 aa4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 ZSWIM4Q9H7M6 989 aa4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 MYOM3Q5VTT5 1437 aa4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 MAP3K13O43283 966 aa4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 LDHAP00338 332 aaKnown RBP4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 FKBP15Q5T1M5 1219 aa4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 SND1Q7KZF4 910 aaKnown RBP eCLIP4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 CLASRPQ8N2M8 674 aaKnown RBP4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 SAMD3Q8N6K7 520 aa4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 TMEM165Q9HC07 324 aa4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 PHF8Q9UPP1 1060 aa4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 CCDC18Q5T9S5 1454 aa4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 PLEKHH2Q8IVE3 1493 aa4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 DEPDC5O75140 1603 aa4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 CFAP69A5D8W1 941 aa4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 CEP104O60308 925 aa4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 SMC2O95347 1197 aa4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 MATR3P43243 847 aaKnown RBP eCLIP4.5□□□□□ -1.694e-9■■■□□ 17.9
R3HDM1-220ENST00000628915 WDR43Q15061 677 aaKnown RBP eCLIP4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 KIF4BQ2VIQ3 1234 aa4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 TBC1D10BQ4KMP7 808 aaPredicted RBP4.5□□□□□ -1.69
R3HDM1-220ENST00000628915 MICALCLQ6ZW33 695 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms