RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 CICQ96RK0 1608 aaPredicted RBP8.64□□□□□ -1.03
BRCC3-209ENST00000620502 KCPQ6ZWJ8 1503 aa8.64□□□□□ -1.03
BRCC3-209ENST00000620502 UBR3Q6ZT12 1888 aa8.64□□□□□ -1.03
BRCC3-209ENST00000620502 COL24A1Q17RW2 1714 aa8.63□□□□□ -1.03
BRCC3-209ENST00000620502 PTCD1O75127 700 aaKnown RBP8.63□□□□□ -1.03
BRCC3-209ENST00000620502 COPS2P61201 443 aa8.63□□□□□ -1.03
BRCC3-209ENST00000620502 FUT2Q10981 343 aa8.63□□□□□ -1.03
BRCC3-209ENST00000620502 DCTN1Q14203 1278 aa8.63□□□□□ -1.03
BRCC3-209ENST00000620502 NFE2L2Q16236 605 aa8.63□□□□□ -1.03
BRCC3-209ENST00000620502 MCM10Q7L590 875 aa8.63□□□□□ -1.03
BRCC3-209ENST00000620502 AMIGO3Q86WK7 504 aa8.63□□□□□ -1.03
BRCC3-209ENST00000620502 COL23A1Q86Y22 540 aaPredicted RBP8.63□□□□□ -1.03
BRCC3-209ENST00000620502 ZNF516Q92618 1163 aa8.63□□□□□ -1.03
BRCC3-209ENST00000620502 TFCP2L1Q9NZI6 479 aa8.63□□□□□ -1.03
BRCC3-209ENST00000620502 ANP32CO43423 234 aa8.62□□□□□ -1.03
BRCC3-209ENST00000620502 ZBTB7AO95365 584 aa8.62□□□□□ -1.03
BRCC3-209ENST00000620502 MS4A1P11836 297 aa8.62□□□□□ -1.03
BRCC3-209ENST00000620502 HMGB2P26583 209 aaKnown RBP8.62□□□□□ -1.03
BRCC3-209ENST00000620502 TEFQ10587 303 aa8.62□□□□□ -1.03
BRCC3-209ENST00000620502 SMIM5Q71RC9 77 aa8.62□□□□□ -1.03
BRCC3-209ENST00000620502 MAPK8IP3Q9UPT6 1336 aa8.61□□□□□ -1.03
BRCC3-209ENST00000620502 MYH14Q7Z406 1995 aaKnown RBP8.61□□□□□ -1.03
BRCC3-209ENST00000620502 KCNQ3O43525 872 aa8.61□□□□□ -1.03
BRCC3-209ENST00000620502 KDM4AO75164 1064 aa8.61□□□□□ -1.03
BRCC3-209ENST00000620502 ZPR1O75312 459 aa8.61□□□□□ -1.03
BRCC3-209ENST00000620502 NEFMP07197 916 aa8.61□□□□□ -1.03
BRCC3-209ENST00000620502 WDR43Q15061 677 aaKnown RBP eCLIP8.61□□□□□ -1.03
BRCC3-209ENST00000620502 PUS10Q3MIT2 529 aaKnown RBP8.61□□□□□ -1.03
BRCC3-209ENST00000620502 MORN1Q5T089 497 aa8.61□□□□□ -1.03
BRCC3-209ENST00000620502 RC3H1Q5TC82 1133 aaKnown RBP8.61□□□□□ -1.03
BRCC3-209ENST00000620502 ZNF790Q6PG37 636 aa8.61□□□□□ -1.03
BRCC3-209ENST00000620502 CCDC146Q8IYE0 955 aa8.61□□□□□ -1.03
BRCC3-209ENST00000620502 RTF1Q92541 710 aaKnown RBP8.61□□□□□ -1.03
BRCC3-209ENST00000620502 RUNDC1Q96C34 613 aa8.61□□□□□ -1.03
BRCC3-209ENST00000620502 MTFR1LQ9H019 292 aa8.61□□□□□ -1.03
BRCC3-209ENST00000620502 SPON1Q9HCB6 807 aa8.61□□□□□ -1.03
BRCC3-209ENST00000620502 BTBD11A6QL63 1104 aa8.6□□□□□ -1.03
BRCC3-209ENST00000620502 TMPOP42166 694 aaKnown RBP8.6□□□□□ -1.03
BRCC3-209ENST00000620502 RIPK4P57078 832 aa8.6□□□□□ -1.03
BRCC3-209ENST00000620502 INTS5Q6P9B9 1019 aaKnown RBP8.6□□□□□ -1.03
BRCC3-209ENST00000620502 DNAJC10Q8IXB1 793 aa8.6□□□□□ -1.03
BRCC3-209ENST00000620502 PNISRQ8TF01 805 aaKnown RBP8.6□□□□□ -1.03
BRCC3-209ENST00000620502 SLC16A10Q8TF71 515 aa8.6□□□□□ -1.03
BRCC3-209ENST00000620502 ZNF496Q96IT1 587 aaPredicted RBP8.6□□□□□ -1.03
BRCC3-209ENST00000620502 CNTNAP4Q9C0A0 1308 aa8.59□□□□□ -1.03
BRCC3-209ENST00000620502 KDM3BQ7LBC6 1761 aa8.59□□□□□ -1.03
BRCC3-209ENST00000620502 NR1I2O75469 434 aa8.59□□□□□ -1.03
BRCC3-209ENST00000620502 RPS6KA4O75676 772 aa8.59□□□□□ -1.03
BRCC3-209ENST00000620502 CYP19A1P11511 503 aaPredicted RBP8.59□□□□□ -1.03
BRCC3-209ENST00000620502 SSFA2P28290 1259 aa8.59□□□□□ -1.03
BRCC3-209ENST00000620502 USP46P62068 366 aa8.59□□□□□ -1.03
BRCC3-209ENST00000620502 TAF7Q15545 349 aaPredicted RBP8.59□□□□□ -1.03
BRCC3-209ENST00000620502 SCUBE3Q8IX30 993 aa8.59□□□□□ -1.03
BRCC3-209ENST00000620502 TTC5Q8N0Z6 440 aa8.59□□□□□ -1.03
BRCC3-209ENST00000620502 FLAD1Q8NFF5 587 aa8.59□□□□□ -1.03
BRCC3-209ENST00000620502 THUMPD2Q9BTF0 503 aaKnown RBP8.59□□□□□ -1.03
BRCC3-209ENST00000620502 MIS18AQ9NYP9 233 aa8.59□□□□□ -1.03
BRCC3-209ENST00000620502 RRP7AQ9Y3A4 280 aaKnown RBP8.59□□□□□ -1.03
BRCC3-209ENST00000620502 HEG1Q9ULI3 1381 aa8.59□□□□□ -1.03
BRCC3-209ENST00000620502 CRKLP46109 303 aaKnown RBP8.58□□□□□ -1.04
BRCC3-209ENST00000620502 NKX2-3Q8TAU0 364 aa8.58□□□□□ -1.04
BRCC3-209ENST00000620502 BEGAINQ9BUH8 593 aa8.58□□□□□ -1.04
BRCC3-209ENST00000620502 C4AP0C0L4 1744 aa8.57□□□□□ -1.04
BRCC3-209ENST00000620502 HOXA2O43364 376 aa8.57□□□□□ -1.04
BRCC3-209ENST00000620502 PRKCSHP14314 528 aaPredicted RBP8.57□□□□□ -1.04
BRCC3-209ENST00000620502 NEUROD2Q15784 382 aa8.57□□□□□ -1.04
BRCC3-209ENST00000620502 GRIPAP1Q4V328 841 aa8.57□□□□□ -1.04
BRCC3-209ENST00000620502 TRAPPC3LQ5T215 181 aa8.57□□□□□ -1.04
BRCC3-209ENST00000620502 SPIRE2Q8WWL2 714 aa8.57□□□□□ -1.04
BRCC3-209ENST00000620502 FMNL2Q96PY5 1086 aa8.57□□□□□ -1.04
BRCC3-209ENST00000620502 GPBP1L1Q9HC44 474 aaPredicted RBP8.57□□□□□ -1.04
BRCC3-209ENST00000620502 MRS2Q9HD23 443 aa8.57□□□□□ -1.04
BRCC3-209ENST00000620502 CCDC87Q9NVE4 849 aa8.57□□□□□ -1.04
BRCC3-209ENST00000620502 SLC27A5Q9Y2P5 690 aa8.57□□□□□ -1.04
BRCC3-209ENST00000620502 RTCBQ9Y3I0 505 aaKnown RBP8.57□□□□□ -1.04
BRCC3-209ENST00000620502 PRAMEF22A3QJZ6 481 aa8.56□□□□□ -1.04
BRCC3-209ENST00000620502 APAF1O14727 1248 aa8.56□□□□□ -1.04
BRCC3-209ENST00000620502 NUTM1Q86Y26 1132 aa8.56□□□□□ -1.04
BRCC3-209ENST00000620502 TEX13AQ9BXU3 409 aaPredicted RBP8.56□□□□□ -1.04
BRCC3-209ENST00000620502 USP16Q9Y5T5 823 aa8.56□□□□□ -1.04
BRCC3-209ENST00000620502 TLL1O43897 1013 aa8.55□□□□□ -1.04
BRCC3-209ENST00000620502 SNRPA1P09661 255 aaKnown RBP8.55□□□□□ -1.04
BRCC3-209ENST00000620502 EIF4A1P60842 406 aaKnown RBP8.55□□□□□ -1.04
BRCC3-209ENST00000620502 LMOD3Q0VAK6 560 aa8.55□□□□□ -1.04
BRCC3-209ENST00000620502 MSL1Q68DK7 614 aa8.55□□□□□ -1.04
BRCC3-209ENST00000620502 HLA-CQ95604 372 aa8.55□□□□□ -1.04
BRCC3-209ENST00000620502 THAP11Q96EK4 314 aa8.55□□□□□ -1.04
BRCC3-209ENST00000620502 ARXQ96QS3 562 aa8.55□□□□□ -1.04
BRCC3-209ENST00000620502 KDM4CQ9H3R0 1056 aa8.55□□□□□ -1.04
BRCC3-209ENST00000620502 ZBTB1Q9Y2K1 713 aa8.55□□□□□ -1.04
BRCC3-209ENST00000620502 SOS1Q07889 1333 aaPredicted RBP8.54□□□□□ -1.04
BRCC3-209ENST00000620502 CHL1O00533 1208 aa8.54□□□□□ -1.04
BRCC3-209ENST00000620502 STARD3NLO95772 234 aa8.54□□□□□ -1.04
BRCC3-209ENST00000620502 A1BGP04217 495 aa8.54□□□□□ -1.04
BRCC3-209ENST00000620502 GYS1P13807 737 aa8.54□□□□□ -1.04
BRCC3-209ENST00000620502 CANXP27824 592 aaKnown RBP8.54□□□□□ -1.04
BRCC3-209ENST00000620502 RFC4P35249 363 aa8.54□□□□□ -1.04
BRCC3-209ENST00000620502 EIF5P55010 431 aaKnown RBP8.54□□□□□ -1.04
BRCC3-209ENST00000620502 BABAM1Q9NWV8 329 aa8.54□□□□□ -1.04
BRCC3-209ENST00000620502 PPP1R1BQ9UD71 204 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms