RNA–Protein interactions for RNA: ENST00000619890.1

SSX4B-202, Transcript of SSX family member 4B, humanhuman

TSL 5 BASIC

Gene SSX4B, Length 1,092 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-202ENST00000619890 A0A087WZG4 1122 aa7.93□□□□□ -1.14
SSX4B-202ENST00000619890 ANP32CO43423 234 aa7.93□□□□□ -1.14
SSX4B-202ENST00000619890 ZPR1O75312 459 aa7.93□□□□□ -1.14
SSX4B-202ENST00000619890 TAF7Q15545 349 aaPredicted RBP7.93□□□□□ -1.14
SSX4B-202ENST00000619890 INTS5Q6P9B9 1019 aaKnown RBP7.93□□□□□ -1.14
SSX4B-202ENST00000619890 SAPCD2Q86UD0 394 aa7.93□□□□□ -1.14
SSX4B-202ENST00000619890 ZNF622Q969S3 477 aaKnown RBP eCLIP7.93□□□□□ -1.14
SSX4B-202ENST00000619890 BABAM1Q9NWV8 329 aa7.93□□□□□ -1.14
SSX4B-202ENST00000619890 ZBTB1Q9Y2K1 713 aa7.93□□□□□ -1.14
SSX4B-202ENST00000619890 SCN4AP35499 1836 aa7.93□□□□□ -1.14
SSX4B-202ENST00000619890 ADAMTSL1Q8N6G6 1762 aa7.92□□□□□ -1.14
SSX4B-202ENST00000619890 DLEC1Q9Y238 1755 aa7.92□□□□□ -1.14
SSX4B-202ENST00000619890 MKI67P46013 3256 aaKnown RBP7.92□□□□□ -1.14
SSX4B-202ENST00000619890 TRAF5O00463 557 aa7.92□□□□□ -1.14
SSX4B-202ENST00000619890 SNRPA1P09661 255 aaKnown RBP7.92□□□□□ -1.14
SSX4B-202ENST00000619890 IL6STP40189 918 aaPredicted RBP7.92□□□□□ -1.14
SSX4B-202ENST00000619890 TMPOP42166 694 aaKnown RBP7.92□□□□□ -1.14
SSX4B-202ENST00000619890 DCTN1Q14203 1278 aa7.92□□□□□ -1.14
SSX4B-202ENST00000619890 NPM2Q86SE8 214 aaKnown RBP7.92□□□□□ -1.14
SSX4B-202ENST00000619890 SLC17A8Q8NDX2 589 aa7.92□□□□□ -1.14
SSX4B-202ENST00000619890 ZIC5Q96T25 663 aa7.92□□□□□ -1.14
SSX4B-202ENST00000619890 RNF123Q5XPI4 1314 aa7.92□□□□□ -1.14
SSX4B-202ENST00000619890 ZNF541Q9H0D2 1346 aa7.92□□□□□ -1.14
SSX4B-202ENST00000619890 AFDNP55196 1824 aaKnown RBP7.92□□□□□ -1.14
SSX4B-202ENST00000619890 DICER1Q9UPY3 1922 aaKnown RBP7.91□□□□□ -1.14
SSX4B-202ENST00000619890 G3V3G9 751 aa7.91□□□□□ -1.14
SSX4B-202ENST00000619890 RIPK4P57078 832 aa7.91□□□□□ -1.14
SSX4B-202ENST00000619890 HHIPL1Q96JK4 782 aa7.91□□□□□ -1.14
SSX4B-202ENST00000619890 NARFQ9UHQ1 456 aa7.91□□□□□ -1.14
SSX4B-202ENST00000619890 CARMIL3Q8ND23 1372 aa7.91□□□□□ -1.14
SSX4B-202ENST00000619890 ERBB4Q15303 1308 aa7.9□□□□□ -1.14
SSX4B-202ENST00000619890 EIF5P55010 431 aaKnown RBP7.9□□□□□ -1.14
SSX4B-202ENST00000619890 CALD1Q05682 793 aaKnown RBP7.9□□□□□ -1.14
SSX4B-202ENST00000619890 CCDC146Q8IYE0 955 aa7.9□□□□□ -1.14
SSX4B-202ENST00000619890 BRIP1Q9BX63 1249 aa7.9□□□□□ -1.14
SSX4B-202ENST00000619890 BCL2L12Q9HB09 334 aa7.9□□□□□ -1.14
SSX4B-202ENST00000619890 ADAMTS8Q9UP79 889 aa7.9□□□□□ -1.14
SSX4B-202ENST00000619890 PDZRN3Q9UPQ7 1066 aa7.9□□□□□ -1.14
SSX4B-202ENST00000619890 HPS5Q9UPZ3 1129 aa7.9□□□□□ -1.14
SSX4B-202ENST00000619890 BOLA1Q9Y3E2 137 aa7.9□□□□□ -1.14
SSX4B-202ENST00000619890 ANKRD36CQ5JPF3 1778 aa7.89□□□□□ -1.15
SSX4B-202ENST00000619890 FZD9O00144 591 aa7.89□□□□□ -1.15
SSX4B-202ENST00000619890 TULP1O00294 542 aaPredicted RBP7.89□□□□□ -1.15
SSX4B-202ENST00000619890 CANXP27824 592 aaKnown RBP7.89□□□□□ -1.15
SSX4B-202ENST00000619890 PDE6BP35913 854 aa7.89□□□□□ -1.15
SSX4B-202ENST00000619890 CTU1Q7Z7A3 348 aaKnown RBP7.89□□□□□ -1.15
SSX4B-202ENST00000619890 GPC2Q8N158 579 aa7.89□□□□□ -1.15
SSX4B-202ENST00000619890 C7orf43Q8WVR3 580 aa7.89□□□□□ -1.15
SSX4B-202ENST00000619890 TSPYL4Q9UJ04 414 aa7.89□□□□□ -1.15
SSX4B-202ENST00000619890 FER1L6Q2WGJ9 1857 aa7.89□□□□□ -1.15
SSX4B-202ENST00000619890 COL6A3P12111 3177 aa7.88□□□□□ -1.15
SSX4B-202ENST00000619890 KCNQ3O43525 872 aa7.88□□□□□ -1.15
SSX4B-202ENST00000619890 EIF4A1P60842 406 aaKnown RBP7.88□□□□□ -1.15
SSX4B-202ENST00000619890 NOGQ13253 232 aa7.88□□□□□ -1.15
SSX4B-202ENST00000619890 SOGA3Q5TF21 947 aa7.88□□□□□ -1.15
SSX4B-202ENST00000619890 PRPF40BQ6NWY9 871 aaKnown RBP7.88□□□□□ -1.15
SSX4B-202ENST00000619890 BICDL1Q6ZP65 573 aa7.88□□□□□ -1.15
SSX4B-202ENST00000619890 CNKSR1Q969H4 720 aa7.88□□□□□ -1.15
SSX4B-202ENST00000619890 MARVELD3Q96A59 401 aa7.88□□□□□ -1.15
SSX4B-202ENST00000619890 THUMPD2Q9BTF0 503 aaKnown RBP7.88□□□□□ -1.15
SSX4B-202ENST00000619890 MRS2Q9HD23 443 aa7.88□□□□□ -1.15
SSX4B-202ENST00000619890 ZNF277Q9NRM2 450 aaPredicted RBP7.88□□□□□ -1.15
SSX4B-202ENST00000619890 ZNF652Q9Y2D9 606 aa7.88□□□□□ -1.15
SSX4B-202ENST00000619890 ARFGEF2Q9Y6D5 1785 aa7.88□□□□□ -1.15
SSX4B-202ENST00000619890 TRPA1O75762 1119 aa7.87□□□□□ -1.15
SSX4B-202ENST00000619890 CELF2O95319 508 aaKnown RBP7.87□□□□□ -1.15
SSX4B-202ENST00000619890 HOXB7P09629 217 aa7.87□□□□□ -1.15
SSX4B-202ENST00000619890 EPS15P42566 896 aa7.87□□□□□ -1.15
SSX4B-202ENST00000619890 CCDC24Q8N4L8 307 aa7.87□□□□□ -1.15
SSX4B-202ENST00000619890 RNF186Q9NXI6 227 aa7.87□□□□□ -1.15
SSX4B-202ENST00000619890 SAGE1Q9NXZ1 904 aa7.87□□□□□ -1.15
SSX4B-202ENST00000619890 RRP7AQ9Y3A4 280 aaKnown RBP7.87□□□□□ -1.15
SSX4B-202ENST00000619890 ZNF330Q9Y3S2 320 aaPredicted RBP7.87□□□□□ -1.15
SSX4B-202ENST00000619890 ANKRD31Q8N7Z5 1873 aa7.87□□□□□ -1.15
SSX4B-202ENST00000619890 NUP98P52948 1817 aa7.87□□□□□ -1.15
SSX4B-202ENST00000619890 COL11A2P13942 1736 aaPredicted RBP7.86□□□□□ -1.15
SSX4B-202ENST00000619890 IBTKQ9P2D0 1353 aaPredicted RBP7.86□□□□□ -1.15
SSX4B-202ENST00000619890 CAMTA2O94983 1202 aa7.86□□□□□ -1.15
SSX4B-202ENST00000619890 A1BGP04217 495 aa7.86□□□□□ -1.15
SSX4B-202ENST00000619890 SRGNP10124 158 aa7.86□□□□□ -1.15
SSX4B-202ENST00000619890 EMP3P54852 163 aa7.86□□□□□ -1.15
SSX4B-202ENST00000619890 FKBP4Q02790 459 aaKnown RBP eCLIP7.86□□□□□ -1.15
SSX4B-202ENST00000619890 NEUROD2Q15784 382 aa7.86□□□□□ -1.15
SSX4B-202ENST00000619890 CCDC27Q2M243 656 aa7.86□□□□□ -1.15
SSX4B-202ENST00000619890 STYK1Q6J9G0 422 aa7.86□□□□□ -1.15
SSX4B-202ENST00000619890 CLEC4GQ6UXB4 293 aa7.86□□□□□ -1.15
SSX4B-202ENST00000619890 USP50Q70EL3 339 aaPredicted RBP7.86□□□□□ -1.15
SSX4B-202ENST00000619890 DZIP3Q86Y13 1208 aaKnown RBP7.86□□□□□ -1.15
SSX4B-202ENST00000619890 IFT57Q9NWB7 429 aa7.86□□□□□ -1.15
SSX4B-202ENST00000619890 USP16Q9Y5T5 823 aa7.86□□□□□ -1.15
SSX4B-202ENST00000619890 RIC1Q4ADV7 1423 aa7.86□□□□□ -1.15
SSX4B-202ENST00000619890 PRAMEF22A3QJZ6 481 aa7.85□□□□□ -1.15
SSX4B-202ENST00000619890 CHL1O00533 1208 aa7.85□□□□□ -1.15
SSX4B-202ENST00000619890 APAF1O14727 1248 aa7.85□□□□□ -1.15
SSX4B-202ENST00000619890 SCNN1DP51172 638 aa7.85□□□□□ -1.15
SSX4B-202ENST00000619890 GNAI1P63096 354 aa7.85□□□□□ -1.15
SSX4B-202ENST00000619890 PKN2Q16513 984 aaKnown RBP7.85□□□□□ -1.15
SSX4B-202ENST00000619890 CCDC93Q567U6 631 aa7.85□□□□□ -1.15
SSX4B-202ENST00000619890 PRR5LQ6MZQ0 368 aa7.85□□□□□ -1.15
SSX4B-202ENST00000619890 KIF6Q6ZMV9 814 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms