RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 IGKV5-2P06315 115 aa14.65□□□□□ -0.06
SRRT-216ENST00000618262 NUTM1Q86Y26 1132 aa14.65□□□□□ -0.06
SRRT-216ENST00000618262 UPF1Q92900 1129 aaKnown RBP eCLIP14.65□□□□□ -0.06
SRRT-216ENST00000618262 FAM89AQ96GI7 184 aa14.65□□□□□ -0.06
SRRT-216ENST00000618262 API5Q9BZZ5 524 aaKnown RBP14.65□□□□□ -0.06
SRRT-216ENST00000618262 MTMR7Q9Y216 660 aa14.65□□□□□ -0.06
SRRT-216ENST00000618262 NPHP1O15259 732 aa14.64□□□□□ -0.07
SRRT-216ENST00000618262 DDX58O95786 925 aaKnown RBP14.64□□□□□ -0.07
SRRT-216ENST00000618262 EIF5P55010 431 aaKnown RBP14.64□□□□□ -0.07
SRRT-216ENST00000618262 TRAPPC3LQ5T215 181 aa14.64□□□□□ -0.07
SRRT-216ENST00000618262 MYH14Q7Z406 1995 aaKnown RBP14.64□□□□□ -0.07
SRRT-216ENST00000618262 MVPQ14764 893 aaKnown RBP14.64□□□□□ -0.07
SRRT-216ENST00000618262 RINLQ6ZS11 566 aa14.64□□□□□ -0.07
SRRT-216ENST00000618262 RNF217Q8TC41 542 aa14.64□□□□□ -0.07
SRRT-216ENST00000618262 C9orf78Q9NZ63 289 aaPredicted RBP14.64□□□□□ -0.07
SRRT-216ENST00000618262 NHSQ6T4R5 1651 aa14.64□□□□□ -0.07
SRRT-216ENST00000618262 ZPR1O75312 459 aa14.64□□□□□ -0.07
SRRT-216ENST00000618262 UBE3BQ7Z3V4 1068 aa14.64□□□□□ -0.07
SRRT-216ENST00000618262 COL15A1P39059 1388 aa14.63□□□□□ -0.07
SRRT-216ENST00000618262 LOC102724159A0A0B4J2E5 919 aa14.63□□□□□ -0.07
SRRT-216ENST00000618262 PLSCR1O15162 318 aa14.63□□□□□ -0.07
SRRT-216ENST00000618262 PWP2Q15269 919 aaKnown RBP14.63□□□□□ -0.07
SRRT-216ENST00000618262 SRCIN1Q9C0H9 1055 aa14.63□□□□□ -0.07
SRRT-216ENST00000618262 IL6STP40189 918 aaPredicted RBP14.63□□□□□ -0.07
SRRT-216ENST00000618262 NIP7Q9Y221 180 aaKnown RBP eCLIP14.63□□□□□ -0.07
SRRT-216ENST00000618262 CHMP3Q9Y3E7 222 aa14.63□□□□□ -0.07
SRRT-216ENST00000618262 PTPRCP08575 1304 aa14.62□□□□□ -0.07
SRRT-216ENST00000618262 RNF123Q5XPI4 1314 aa14.62□□□□□ -0.07
SRRT-216ENST00000618262 FRAT2O75474 233 aaPredicted RBP14.62□□□□□ -0.07
SRRT-216ENST00000618262 SATB1Q01826 763 aa14.62□□□□□ -0.07
SRRT-216ENST00000618262 NEXNQ0ZGT2 675 aa14.62□□□□□ -0.07
SRRT-216ENST00000618262 R3HDM1Q15032 1099 aaKnown RBP14.62□□□□□ -0.07
SRRT-216ENST00000618262 BEND3Q5T5X7 828 aa14.62□□□□□ -0.07
SRRT-216ENST00000618262 CCDC94Q9BW85 323 aaPredicted RBP14.62□□□□□ -0.07
SRRT-216ENST00000618262 COL23A1Q86Y22 540 aaPredicted RBP14.62□□□□□ -0.07
SRRT-216ENST00000618262 SOS1Q07889 1333 aaPredicted RBP14.62□□□□□ -0.07
SRRT-216ENST00000618262 A0A087WZG4 1122 aa14.61□□□□□ -0.07
SRRT-216ENST00000618262 TBC1D9BQ66K14 1250 aa14.61□□□□□ -0.07
SRRT-216ENST00000618262 PLBD2Q8NHP8 589 aa14.61□□□□□ -0.07
SRRT-216ENST00000618262 UBR2Q8IWV8 1755 aa14.61□□□□□ -0.07
SRRT-216ENST00000618262 RPS6KA4O75676 772 aa14.61□□□□□ -0.07
SRRT-216ENST00000618262 EXOC8Q8IYI6 725 aa14.61□□□□□ -0.07
SRRT-216ENST00000618262 PCDHB15Q9Y5E8 787 aa14.61□□□□□ -0.07
SRRT-216ENST00000618262 PAPPAQ13219 1627 aa14.61□□□□□ -0.07
SRRT-216ENST00000618262 ZBTB7AO95365 584 aa14.61□□□□□ -0.07
SRRT-216ENST00000618262 CCDC96Q2M329 555 aa14.61□□□□□ -0.07
SRRT-216ENST00000618262 SLC27A3Q5K4L6 730 aa14.61□□□□□ -0.07
SRRT-216ENST00000618262 KCTD17Q8N5Z5 321 aa14.61□□□□□ -0.07
SRRT-216ENST00000618262 ABCC4O15439 1325 aa14.6□□□□□ -0.07
SRRT-216ENST00000618262 MAP3K15Q6ZN16 1313 aa14.6□□□□□ -0.07
SRRT-216ENST00000618262 METTL22Q9BUU2 404 aaPredicted RBP14.6□□□□□ -0.07
SRRT-216ENST00000618262 USP44Q9H0E7 712 aa14.6□□□□□ -0.07
SRRT-216ENST00000618262 LRRFIP2Q9Y608 721 aaKnown RBP14.6□□□□□ -0.07
SRRT-216ENST00000618262 CAMTA2O94983 1202 aa14.6□□□□□ -0.07
SRRT-216ENST00000618262 HCLS1P14317 486 aaPredicted RBP14.6□□□□□ -0.07
SRRT-216ENST00000618262 PDE3AQ14432 1141 aa14.6□□□□□ -0.07
SRRT-216ENST00000618262 TJP1Q07157 1748 aa14.59□□□□□ -0.07
SRRT-216ENST00000618262 NEURL1BA8MQ27 555 aa14.59□□□□□ -0.07
SRRT-216ENST00000618262 ZBTB7BO15156 539 aaPredicted RBP14.59□□□□□ -0.07
SRRT-216ENST00000618262 KLHDC4Q8TBB5 520 aa14.59□□□□□ -0.07
SRRT-216ENST00000618262 UBN2Q6ZU65 1347 aa14.59□□□□□ -0.07
SRRT-216ENST00000618262 POLD1P28340 1107 aa14.59□□□□□ -0.07
SRRT-216ENST00000618262 BCL2L12Q9HB09 334 aa14.59□□□□□ -0.07
SRRT-216ENST00000618262 PPP1R1BQ9UD71 204 aaPredicted RBP14.59□□□□□ -0.07
SRRT-216ENST00000618262 TRMT112Q9UI30 125 aaKnown RBP14.59□□□□□ -0.07
SRRT-216ENST00000618262 ATF5Q9Y2D1 282 aaPredicted RBP14.58□□□□□ -0.07
SRRT-216ENST00000618262 SLC15A2Q16348 729 aa14.58□□□□□ -0.08
SRRT-216ENST00000618262 SUSD4Q5VX71 490 aa14.58□□□□□ -0.08
SRRT-216ENST00000618262 ARHGAP45Q92619 1136 aa14.58□□□□□ -0.08
SRRT-216ENST00000618262 SSR1P43307 286 aaKnown RBP14.58□□□□□ -0.08
SRRT-216ENST00000618262 GIGYF2Q6Y7W6 1299 aaKnown RBP14.58□□□□□ -0.08
SRRT-216ENST00000618262 TSHZ1Q6ZSZ6 1077 aa14.58□□□□□ -0.08
SRRT-216ENST00000618262 STK32BQ9NY57 414 aa14.58□□□□□ -0.08
SRRT-216ENST00000618262 CNTNAP4Q9C0A0 1308 aa14.57□□□□□ -0.08
SRRT-216ENST00000618262 UBTFL1P0CB47 393 aaPredicted RBP14.57□□□□□ -0.08
SRRT-216ENST00000618262 TCIRG1Q13488 830 aa14.57□□□□□ -0.08
SRRT-216ENST00000618262 GCKRQ14397 625 aa14.57□□□□□ -0.08
SRRT-216ENST00000618262 DDX19BQ9UMR2 479 aa14.57□□□□□ -0.08
SRRT-216ENST00000618262 IGHDP01880 384 aa14.57□□□□□ -0.08
SRRT-216ENST00000618262 XRCC6P12956 609 aaKnown RBP eCLIP14.57□□□□□ -0.08
SRRT-216ENST00000618262 CCT4P50991 539 aaKnown RBP14.57□□□□□ -0.08
SRRT-216ENST00000618262 BRPF1P55201 1214 aaPredicted RBP14.57□□□□□ -0.08
SRRT-216ENST00000618262 EPHA10Q5JZY3 1008 aa14.57□□□□□ -0.08
SRRT-216ENST00000618262 NBPF5PQ86XG9 351 aaPredicted RBP14.57□□□□□ -0.08
SRRT-216ENST00000618262 INTS3Q68E01 1043 aaKnown RBP14.56□□□□□ -0.08
SRRT-216ENST00000618262 LINS1Q8NG48 757 aa14.56□□□□□ -0.08
SRRT-216ENST00000618262 AKT1S1Q96B36 256 aa14.56□□□□□ -0.08
SRRT-216ENST00000618262 PNPLA7Q6ZV29 1317 aa14.56□□□□□ -0.08
SRRT-216ENST00000618262 SUCLG2Q96I99 432 aa14.56□□□□□ -0.08
SRRT-216ENST00000618262 RAI14Q9P0K7 980 aa14.56□□□□□ -0.08
SRRT-216ENST00000618262 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.55□□□□□ -0.08
SRRT-216ENST00000618262 SLC51AQ86UW1 340 aa14.55□□□□□ -0.08
SRRT-216ENST00000618262 SIL1Q9H173 461 aa14.55□□□□□ -0.08
SRRT-216ENST00000618262 CWC25Q9NXE8 425 aaPredicted RBP14.55□□□□□ -0.08
SRRT-216ENST00000618262 GRM8O00222 908 aa14.55□□□□□ -0.08
SRRT-216ENST00000618262 GYS1P13807 737 aa14.55□□□□□ -0.08
SRRT-216ENST00000618262 NLRP10Q86W26 655 aa14.55□□□□□ -0.08
SRRT-216ENST00000618262 ZBTB40Q9NUA8 1239 aa14.55□□□□□ -0.08
SRRT-216ENST00000618262 PNMA6EA0A0J9YXQ4 647 aa14.55□□□□□ -0.08
SRRT-216ENST00000618262 NFIXQ14938 502 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms