RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 CCDC9Q9Y3X0 531 aaKnown RBP14.04□□□□□ -0.16
C11orf54-215ENST00000617482 OVOS2A0A0G2JMS6 1433 aa14.04□□□□□ -0.16
C11orf54-215ENST00000617482 ATP5J2-PTCD1G3V325 749 aa14.03□□□□□ -0.16
C11orf54-215ENST00000617482 PTCD1O75127 700 aaKnown RBP14.03□□□□□ -0.16
C11orf54-215ENST00000617482 TAF5LO75529 589 aa14.03□□□□□ -0.16
C11orf54-215ENST00000617482 KRT85P78386 507 aa14.03□□□□□ -0.16
C11orf54-215ENST00000617482 GLIPR1L2Q4G1C9 344 aa14.03□□□□□ -0.16
C11orf54-215ENST00000617482 DBNLQ9UJU6 430 aaKnown RBP14.03□□□□□ -0.16
C11orf54-215ENST00000617482 NPHP3Q7Z494 1330 aa14.03□□□□□ -0.16
C11orf54-215ENST00000617482 NPHP4O75161 1426 aaPredicted RBP14.03□□□□□ -0.16
C11orf54-215ENST00000617482 AP5Z1O43299 807 aa14.03□□□□□ -0.16
C11orf54-215ENST00000617482 ANKRD1Q15327 319 aa14.03□□□□□ -0.16
C11orf54-215ENST00000617482 UBE3BQ7Z3V4 1068 aa14.03□□□□□ -0.16
C11orf54-215ENST00000617482 PDCL3Q9H2J4 239 aa14.03□□□□□ -0.16
C11orf54-215ENST00000617482 PHKG2P15735 406 aa14.02□□□□□ -0.16
C11orf54-215ENST00000617482 LIG1P18858 919 aa14.02□□□□□ -0.16
C11orf54-215ENST00000617482 CCDC129Q6ZRS4 1044 aa14.02□□□□□ -0.16
C11orf54-215ENST00000617482 DNAJC2Q99543 621 aaKnown RBP14.02□□□□□ -0.16
C11orf54-215ENST00000617482 MED23Q9ULK4 1368 aa14.02□□□□□ -0.16
C11orf54-215ENST00000617482 PDCP20941 246 aa14.02□□□□□ -0.17
C11orf54-215ENST00000617482 PTPN12Q05209 780 aaKnown RBP14.02□□□□□ -0.17
C11orf54-215ENST00000617482 TNNI3KQ59H18 835 aa14.02□□□□□ -0.17
C11orf54-215ENST00000617482 PROSER2Q86WR7 435 aaPredicted RBP14.02□□□□□ -0.17
C11orf54-215ENST00000617482 SEC62Q99442 399 aaKnown RBP14.02□□□□□ -0.17
C11orf54-215ENST00000617482 FPGT-TNNI3KV9GXZ4 949 aa14.02□□□□□ -0.17
C11orf54-215ENST00000617482 RGPD5Q99666 1765 aa14.02□□□□□ -0.17
C11orf54-215ENST00000617482 SASS6Q6UVJ0 657 aa14.01□□□□□ -0.17
C11orf54-215ENST00000617482 COL15A1P39059 1388 aa14.01□□□□□ -0.17
C11orf54-215ENST00000617482 CCDC192P0DO97 292 aa14.01□□□□□ -0.17
C11orf54-215ENST00000617482 CSB-PGBD3P0DP91 1061 aa14.01□□□□□ -0.17
C11orf54-215ENST00000617482 TATP17735 454 aaPredicted RBP14.01□□□□□ -0.17
C11orf54-215ENST00000617482 ATP5JP18859 108 aa14.01□□□□□ -0.17
C11orf54-215ENST00000617482 NOLC1Q14978 699 aaKnown RBP eCLIP14.01□□□□□ -0.17
C11orf54-215ENST00000617482 TTC5Q8N0Z6 440 aa14.01□□□□□ -0.17
C11orf54-215ENST00000617482 COPRSQ9NQ92 184 aa14.01□□□□□ -0.17
C11orf54-215ENST00000617482 PHRF1Q9P1Y6 1649 aaKnown RBP14.01□□□□□ -0.17
C11orf54-215ENST00000617482 KDM6AO15550 1401 aaPredicted RBP14□□□□□ -0.17
C11orf54-215ENST00000617482 JAK2O60674 1132 aa14□□□□□ -0.17
C11orf54-215ENST00000617482 SNRPA1P09661 255 aaKnown RBP14□□□□□ -0.17
C11orf54-215ENST00000617482 RFX5P48382 616 aaPredicted RBP14□□□□□ -0.17
C11orf54-215ENST00000617482 SPC24Q8NBT2 197 aa14□□□□□ -0.17
C11orf54-215ENST00000617482 PIBF1Q8WXW3 757 aa14□□□□□ -0.17
C11orf54-215ENST00000617482 DBNDD2Q9BQY9 259 aa14□□□□□ -0.17
C11orf54-215ENST00000617482 HMG20BQ9P0W2 317 aa14□□□□□ -0.17
C11orf54-215ENST00000617482 SLIT3O75094 1523 aa14□□□□□ -0.17
C11orf54-215ENST00000617482 A0A087WZG4 1122 aa14□□□□□ -0.17
C11orf54-215ENST00000617482 GOLGA6L4A6NEF3 574 aa14□□□□□ -0.17
C11orf54-215ENST00000617482 CKAP2LQ8IYA6 745 aa14□□□□□ -0.17
C11orf54-215ENST00000617482 SPATA32Q96LK8 384 aa14□□□□□ -0.17
C11orf54-215ENST00000617482 TSGA10IPQ3SY00 556 aa13.99□□□□□ -0.17
C11orf54-215ENST00000617482 DDX46Q7L014 1031 aaKnown RBP13.99□□□□□ -0.17
C11orf54-215ENST00000617482 LRP10Q7Z4F1 713 aa13.99□□□□□ -0.17
C11orf54-215ENST00000617482 IFNL2Q8IZJ0 200 aa13.99□□□□□ -0.17
C11orf54-215ENST00000617482 CABLES1Q8TDN4 633 aa13.99□□□□□ -0.17
C11orf54-215ENST00000617482 DDX11Q96FC9 970 aa13.99□□□□□ -0.17
C11orf54-215ENST00000617482 NEK1Q96PY6 1258 aa13.99□□□□□ -0.17
C11orf54-215ENST00000617482 LRRC2Q9BYS8 371 aa13.99□□□□□ -0.17
C11orf54-215ENST00000617482 NUP62CLQ9H1M0 184 aa13.99□□□□□ -0.17
C11orf54-215ENST00000617482 DACT1Q9NYF0 836 aa13.99□□□□□ -0.17
C11orf54-215ENST00000617482 MAP3K11Q16584 847 aa13.99□□□□□ -0.17
C11orf54-215ENST00000617482 USPL1Q5W0Q7 1092 aa13.99□□□□□ -0.17
C11orf54-215ENST00000617482 ALDH8A1Q9H2A2 487 aaPredicted RBP13.99□□□□□ -0.17
C11orf54-215ENST00000617482 ZNF142P52746 1687 aaPredicted RBP13.98□□□□□ -0.17
C11orf54-215ENST00000617482 HSP90B1P14625 803 aaKnown RBP13.98□□□□□ -0.17
C11orf54-215ENST00000617482 CHRNA2Q15822 529 aa13.98□□□□□ -0.17
C11orf54-215ENST00000617482 SLFNL1Q499Z3 407 aa13.98□□□□□ -0.17
C11orf54-215ENST00000617482 Q6ZUG5 572 aa13.98□□□□□ -0.17
C11orf54-215ENST00000617482 VSIG10Q8N0Z9 540 aa13.98□□□□□ -0.17
C11orf54-215ENST00000617482 LEO1Q8WVC0 666 aaPredicted RBP13.98□□□□□ -0.17
C11orf54-215ENST00000617482 SCAND2PQ9GZW5 306 aaPredicted RBP13.98□□□□□ -0.17
C11orf54-215ENST00000617482 TNMDQ9H2S6 317 aa13.98□□□□□ -0.17
C11orf54-215ENST00000617482 ELP1O95163 1332 aa13.97□□□□□ -0.17
C11orf54-215ENST00000617482 DYNC1I1O14576 645 aa13.97□□□□□ -0.17
C11orf54-215ENST00000617482 CYP27B1O15528 508 aa13.97□□□□□ -0.17
C11orf54-215ENST00000617482 CYP21A2P08686 494 aa13.97□□□□□ -0.17
C11orf54-215ENST00000617482 TYRO3Q06418 890 aa13.97□□□□□ -0.17
C11orf54-215ENST00000617482 KRT32Q14532 448 aa13.97□□□□□ -0.17
C11orf54-215ENST00000617482 LMBR1LQ6UX01 489 aa13.97□□□□□ -0.17
C11orf54-215ENST00000617482 LUZP1Q86V48 1076 aa13.97□□□□□ -0.17
C11orf54-215ENST00000617482 FMNL2Q96PY5 1086 aa13.97□□□□□ -0.17
C11orf54-215ENST00000617482 MRVI1Q9Y6F6 885 aa13.97□□□□□ -0.17
C11orf54-215ENST00000617482 MCMDC2Q4G0Z9 681 aa13.96□□□□□ -0.17
C11orf54-215ENST00000617482 GTF3C6Q969F1 213 aa13.96□□□□□ -0.17
C11orf54-215ENST00000617482 NEUROD6Q96NK8 337 aa13.96□□□□□ -0.17
C11orf54-215ENST00000617482 ZNF609O15014 1411 aa13.96□□□□□ -0.17
C11orf54-215ENST00000617482 RABL6Q3YEC7 729 aaPredicted RBP13.96□□□□□ -0.17
C11orf54-215ENST00000617482 BRF1Q92994 677 aa13.96□□□□□ -0.17
C11orf54-215ENST00000617482 ARID3AQ99856 593 aa13.96□□□□□ -0.17
C11orf54-215ENST00000617482 HAUS7Q99871 368 aa13.96□□□□□ -0.17
C11orf54-215ENST00000617482 JCADQ9P266 1359 aa13.96□□□□□ -0.17
C11orf54-215ENST00000617482 H3BQV1 296 aa13.95□□□□□ -0.18
C11orf54-215ENST00000617482 NR1I2O75469 434 aa13.95□□□□□ -0.18
C11orf54-215ENST00000617482 CABP4P57796 275 aa13.95□□□□□ -0.18
C11orf54-215ENST00000617482 IFFO2Q5TF58 517 aa13.95□□□□□ -0.18
C11orf54-215ENST00000617482 FAM200AQ8TCP9 573 aa13.95□□□□□ -0.18
C11orf54-215ENST00000617482 DCAF5Q96JK2 942 aa13.95□□□□□ -0.18
C11orf54-215ENST00000617482 KCNF1Q9H3M0 494 aa13.95□□□□□ -0.18
C11orf54-215ENST00000617482 U3KPZ7 1027 aaPredicted RBP13.95□□□□□ -0.18
C11orf54-215ENST00000617482 SIPA1L3O60292 1781 aaPredicted RBP13.95□□□□□ -0.18
C11orf54-215ENST00000617482 FOSBP53539 338 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms