RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 TCEANC2Q96MN5 208 aa4.17□□□□□ -1.74
LIG4-205ENST00000614526 ANTXR1Q9H6X2 564 aa4.17□□□□□ -1.74
LIG4-205ENST00000614526 SEC31BQ9NQW1 1179 aa4.17□□□□□ -1.74
LIG4-205ENST00000614526 CEP126Q9P2H0 1117 aa4.17□□□□□ -1.74
LIG4-205ENST00000614526 SRP68Q9UHB9 627 aaKnown RBP4.17□□□□□ -1.74
LIG4-205ENST00000614526 BCL9LQ86UU0 1499 aa4.16□□□□□ -1.74
LIG4-205ENST00000614526 TTC41PQ6P2S7 1318 aa4.16□□□□□ -1.74
LIG4-205ENST00000614526 SGSM2O43147 1006 aa4.16□□□□□ -1.74
LIG4-205ENST00000614526 TAF5LO75529 589 aa4.16□□□□□ -1.74
LIG4-205ENST00000614526 GTF2E1P29083 439 aaPredicted RBP4.16□□□□□ -1.74
LIG4-205ENST00000614526 IL6STP40189 918 aaPredicted RBP4.16□□□□□ -1.74
LIG4-205ENST00000614526 EIF5P55010 431 aaKnown RBP4.16□□□□□ -1.74
LIG4-205ENST00000614526 COL9A3Q14050 684 aaPredicted RBP4.16□□□□□ -1.74
LIG4-205ENST00000614526 RABEP1Q15276 862 aa4.16□□□□□ -1.74
LIG4-205ENST00000614526 FOXD4L6Q3SYB3 417 aaPredicted RBP4.16□□□□□ -1.74
LIG4-205ENST00000614526 TPRNQ4KMQ1 711 aa4.16□□□□□ -1.74
LIG4-205ENST00000614526 METTL24Q5JXM2 366 aa4.16□□□□□ -1.74
LIG4-205ENST00000614526 FOXD4L3Q6VB84 417 aaPredicted RBP4.16□□□□□ -1.74
LIG4-205ENST00000614526 TTLL11Q8NHH1 800 aa4.16□□□□□ -1.74
LIG4-205ENST00000614526 PCCAP05165 728 aaPredicted RBP4.16□□□□□ -1.74
LIG4-205ENST00000614526 MCCP23508 829 aa4.16□□□□□ -1.74
LIG4-205ENST00000614526 ZNF589Q86UQ0 364 aaPredicted RBP4.16□□□□□ -1.74
LIG4-205ENST00000614526 AMIGO3Q86WK7 504 aa4.16□□□□□ -1.74
LIG4-205ENST00000614526 EVI5LQ96CN4 794 aa4.16□□□□□ -1.74
LIG4-205ENST00000614526 CHAMP1Q96JM3 812 aa4.16□□□□□ -1.74
LIG4-205ENST00000614526 GJD4Q96KN9 370 aaPredicted RBP4.16□□□□□ -1.74
LIG4-205ENST00000614526 GZF1Q9H116 711 aaPredicted RBP4.16□□□□□ -1.74
LIG4-205ENST00000614526 QTRT2Q9H974 415 aaKnown RBP4.16□□□□□ -1.74
LIG4-205ENST00000614526 SHANK3Q9BYB0 1731 aa4.16□□□□□ -1.74
LIG4-205ENST00000614526 WTIPA6NIX2 430 aaPredicted RBP4.16□□□□□ -1.74
LIG4-205ENST00000614526 GNPATO15228 680 aa4.16□□□□□ -1.74
LIG4-205ENST00000614526 NPHP1O15259 732 aa4.16□□□□□ -1.74
LIG4-205ENST00000614526 ST18O60284 1047 aa4.16□□□□□ -1.74
LIG4-205ENST00000614526 IL15P40933 162 aaPredicted RBP4.16□□□□□ -1.74
LIG4-205ENST00000614526 PKP1Q13835 747 aa4.16□□□□□ -1.74
LIG4-205ENST00000614526 SEPT12Q8IYM1 358 aa4.16□□□□□ -1.74
LIG4-205ENST00000614526 FNBP4Q8N3X1 1017 aaPredicted RBP4.16□□□□□ -1.74
LIG4-205ENST00000614526 IQSEC3Q9UPP2 1182 aaPredicted RBP4.16□□□□□ -1.74
LIG4-205ENST00000614526 TAF6LQ9Y6J9 622 aa4.16□□□□□ -1.74
LIG4-205ENST00000614526 SLIT2O94813 1529 aa4.15□□□□□ -1.74
LIG4-205ENST00000614526 GLI3P10071 1580 aa4.15□□□□□ -1.74
LIG4-205ENST00000614526 ANKRD18BA2A2Z9 1011 aa4.15□□□□□ -1.74
LIG4-205ENST00000614526 IFIT1P09914 478 aaKnown RBP4.15□□□□□ -1.74
LIG4-205ENST00000614526 DEKP35659 375 aaKnown RBP4.15□□□□□ -1.74
LIG4-205ENST00000614526 SCARF1Q14162 830 aa4.15□□□□□ -1.74
LIG4-205ENST00000614526 ADCK5Q3MIX3 580 aa4.15□□□□□ -1.74
LIG4-205ENST00000614526 USPL1Q5W0Q7 1092 aa4.15□□□□□ -1.74
LIG4-205ENST00000614526 SNX21Q969T3 373 aa4.15□□□□□ -1.74
LIG4-205ENST00000614526 XAGE2Q96GT9 111 aa4.15□□□□□ -1.74
LIG4-205ENST00000614526 LSG1Q9H089 658 aaKnown RBP4.15□□□□□ -1.74
LIG4-205ENST00000614526 CCNL1Q9UK58 526 aaPredicted RBP4.15□□□□□ -1.74
LIG4-205ENST00000614526 AOX1Q06278 1338 aa4.15□□□□□ -1.74
LIG4-205ENST00000614526 CAMTA2O94983 1202 aa4.15□□□□□ -1.75
LIG4-205ENST00000614526 SSFA2P28290 1259 aa4.15□□□□□ -1.75
LIG4-205ENST00000614526 CTSWP56202 376 aa4.15□□□□□ -1.75
LIG4-205ENST00000614526 UTP14AQ9BVJ6 771 aaKnown RBP4.15□□□□□ -1.75
LIG4-205ENST00000614526 CHMP5Q9NZZ3 219 aa4.15□□□□□ -1.75
LIG4-205ENST00000614526 SNX14Q9Y5W7 946 aa4.15□□□□□ -1.75
LIG4-205ENST00000614526 LRP6O75581 1613 aa4.15□□□□□ -1.75
LIG4-205ENST00000614526 PLEKHG2Q9H7P9 1386 aa4.15□□□□□ -1.75
LIG4-205ENST00000614526 ATP5JP18859 108 aa4.15□□□□□ -1.75
LIG4-205ENST00000614526 CASTP20810 708 aaKnown RBP4.15□□□□□ -1.75
LIG4-205ENST00000614526 TRIM28Q13263 835 aaKnown RBP4.15□□□□□ -1.75
LIG4-205ENST00000614526 TTC39AQ5SRH9 613 aa4.15□□□□□ -1.75
LIG4-205ENST00000614526 C3orf67Q6ZVT6 689 aa4.15□□□□□ -1.75
LIG4-205ENST00000614526 ZNF34Q8IZ26 560 aa4.15□□□□□ -1.75
LIG4-205ENST00000614526 RUFY2Q8WXA3 655 aa4.15□□□□□ -1.75
LIG4-205ENST00000614526 SMARCC1Q92922 1105 aaPredicted RBP4.15□□□□□ -1.75
LIG4-205ENST00000614526 JAKMIP1Q96N16 626 aaKnown RBP4.15□□□□□ -1.75
LIG4-205ENST00000614526 RBM8AQ9Y5S9 174 aaKnown RBP4.15□□□□□ -1.75
LIG4-205ENST00000614526 SH3TC1Q8TE82 1336 aa4.14□□□□□ -1.75
LIG4-205ENST00000614526 A0A0G2JLW4 131 aa4.14□□□□□ -1.75
LIG4-205ENST00000614526 PDE8AO60658 829 aa4.14□□□□□ -1.75
LIG4-205ENST00000614526 TRIM37O94972 964 aa4.14□□□□□ -1.75
LIG4-205ENST00000614526 CSF1RP07333 972 aa4.14□□□□□ -1.75
LIG4-205ENST00000614526 HSPA4P34932 840 aa4.14□□□□□ -1.75
LIG4-205ENST00000614526 ATP2B3Q16720 1220 aa4.14□□□□□ -1.75
LIG4-205ENST00000614526 WASHC4Q2M389 1173 aa4.14□□□□□ -1.75
LIG4-205ENST00000614526 ERFEQ4G0M1 354 aa4.14□□□□□ -1.75
LIG4-205ENST00000614526 TBC1D9BQ66K14 1250 aa4.14□□□□□ -1.75
LIG4-205ENST00000614526 TMX3Q96JJ7 454 aa4.14□□□□□ -1.75
LIG4-205ENST00000614526 MPHOSPH8Q99549 860 aa4.14□□□□□ -1.75
LIG4-205ENST00000614526 ITGB4P16144 1822 aa4.14□□□□□ -1.75
LIG4-205ENST00000614526 USP42Q9H9J4 1324 aaKnown RBP4.14□□□□□ -1.75
LIG4-205ENST00000614526 ARFGEF2Q9Y6D5 1785 aa4.14□□□□□ -1.75
LIG4-205ENST00000614526 PLCH1Q4KWH8 1693 aa4.14□□□□□ -1.75
LIG4-205ENST00000614526 AFDNP55196 1824 aaKnown RBP4.14□□□□□ -1.75
LIG4-205ENST00000614526 ERVV-1B6SEH8 477 aa4.14□□□□□ -1.75
LIG4-205ENST00000614526 PPFIA3O75145 1194 aa4.14□□□□□ -1.75
LIG4-205ENST00000614526 ZAP70P43403 619 aa4.14□□□□□ -1.75
LIG4-205ENST00000614526 CCDC158Q5M9N0 1113 aa4.14□□□□□ -1.75
LIG4-205ENST00000614526 VPS53Q5VIR6 699 aa4.14□□□□□ -1.75
LIG4-205ENST00000614526 SLC51AQ86UW1 340 aa4.14□□□□□ -1.75
LIG4-205ENST00000614526 TNPO1Q92973 898 aaKnown RBP4.14□□□□□ -1.75
LIG4-205ENST00000614526 LRRC2Q9BYS8 371 aa4.14□□□□□ -1.75
LIG4-205ENST00000614526 PAG1Q9NWQ8 432 aa4.14□□□□□ -1.75
LIG4-205ENST00000614526 TAOK2Q9UL54 1235 aa4.14□□□□□ -1.75
LIG4-205ENST00000614526 RAD50Q92878 1312 aa4.14□□□□□ -1.75
LIG4-205ENST00000614526 ZPR1O75312 459 aa4.14□□□□□ -1.75
LIG4-205ENST00000614526 FAM196AQ6ZSG2 479 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms