RNA–Protein interactions for RNA: ENST00000610140.5

NT5C3A-213, Transcript of 5'-nucleotidase, cytosolic IIIA, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NT5C3A, Length 1,670 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NT5C3A-213ENST00000610140 SPEF2Q9C093 1822 aa17.36■□□□□ 0.37
NT5C3A-213ENST00000610140 SLC27A2O14975 620 aa17.36■□□□□ 0.37
NT5C3A-213ENST00000610140 LMBR1LQ6UX01 489 aa17.36■□□□□ 0.37
NT5C3A-213ENST00000610140 ITGB4P16144 1822 aa17.35■□□□□ 0.37
NT5C3A-213ENST00000610140 ZSCAN22P10073 491 aaPredicted RBP17.35■□□□□ 0.37
NT5C3A-213ENST00000610140 CCDC173Q0VFZ6 552 aa17.35■□□□□ 0.37
NT5C3A-213ENST00000610140 TTLL7Q6ZT98 887 aa17.35■□□□□ 0.37
NT5C3A-213ENST00000610140 CCDC191Q8NCU4 936 aa17.35■□□□□ 0.37
NT5C3A-213ENST00000610140 ANP32BQ92688 251 aaKnown RBP17.35■□□□□ 0.37
NT5C3A-213ENST00000610140 GPR108Q9NPR9 543 aa17.35■□□□□ 0.37
NT5C3A-213ENST00000610140 ZNF335Q9H4Z2 1342 aaPredicted RBP17.34■□□□□ 0.37
NT5C3A-213ENST00000610140 CPA1P15085 419 aa17.34■□□□□ 0.37
NT5C3A-213ENST00000610140 EVA1CP58658 441 aa17.34■□□□□ 0.37
NT5C3A-213ENST00000610140 TICAM2Q86XR7 235 aa17.34■□□□□ 0.37
NT5C3A-213ENST00000610140 TMEM87AQ8NBN3 555 aa17.34■□□□□ 0.37
NT5C3A-213ENST00000610140 SYAP1Q96A49 352 aaPredicted RBP17.34■□□□□ 0.37
NT5C3A-213ENST00000610140 CHAMP1Q96JM3 812 aa17.34■□□□□ 0.37
NT5C3A-213ENST00000610140 HAUS7Q99871 368 aa17.34■□□□□ 0.37
NT5C3A-213ENST00000610140 ALDH8A1Q9H2A2 487 aaPredicted RBP17.34■□□□□ 0.37
NT5C3A-213ENST00000610140 STX6O43752 255 aa17.33■□□□□ 0.37
NT5C3A-213ENST00000610140 NPM3O75607 178 aaKnown RBP17.33■□□□□ 0.37
NT5C3A-213ENST00000610140 A1BGP04217 495 aa17.33■□□□□ 0.37
NT5C3A-213ENST00000610140 ANKRD1Q15327 319 aa17.33■□□□□ 0.37
NT5C3A-213ENST00000610140 TSGA10IPQ3SY00 556 aa17.33■□□□□ 0.37
NT5C3A-213ENST00000610140 DDX54Q8TDD1 881 aaKnown RBP17.33■□□□□ 0.37
NT5C3A-213ENST00000610140 RBM27Q9P2N5 1060 aaKnown RBP17.33■□□□□ 0.37
NT5C3A-213ENST00000610140 ATP6V1DQ9Y5K8 247 aa17.33■□□□□ 0.37
NT5C3A-213ENST00000610140 LARGE1O95461 756 aa17.32■□□□□ 0.36
NT5C3A-213ENST00000610140 PDIA4P13667 645 aaKnown RBP17.32■□□□□ 0.36
NT5C3A-213ENST00000610140 PPP1R9BQ96SB3 815 aa17.32■□□□□ 0.36
NT5C3A-213ENST00000610140 DBNDD2Q9BQY9 259 aa17.32■□□□□ 0.36
NT5C3A-213ENST00000610140 RRAGDQ9NQL2 400 aaPredicted RBP17.32■□□□□ 0.36
NT5C3A-213ENST00000610140 STRN4Q9NRL3 753 aa17.32■□□□□ 0.36
NT5C3A-213ENST00000610140 TMEM63CQ9P1W3 806 aa17.32■□□□□ 0.36
NT5C3A-213ENST00000610140 SYT1P21579 422 aa17.32■□□□□ 0.36
NT5C3A-213ENST00000610140 USPL1Q5W0Q7 1092 aa17.32■□□□□ 0.36
NT5C3A-213ENST00000610140 LRSAM1Q6UWE0 723 aa17.32■□□□□ 0.36
NT5C3A-213ENST00000610140 CCDC83Q8IWF9 413 aa17.32■□□□□ 0.36
NT5C3A-213ENST00000610140 ATG3Q9NT62 314 aa17.32■□□□□ 0.36
NT5C3A-213ENST00000610140 CHMP3Q9Y3E7 222 aa17.32■□□□□ 0.36
NT5C3A-213ENST00000610140 COL14A1Q05707 1796 aaKnown RBP17.32■□□□□ 0.36
NT5C3A-213ENST00000610140 PLCH1Q4KWH8 1693 aa17.31■□□□□ 0.36
NT5C3A-213ENST00000610140 TAF5LO75529 589 aa17.31■□□□□ 0.36
NT5C3A-213ENST00000610140 IL15P40933 162 aaPredicted RBP17.31■□□□□ 0.36
NT5C3A-213ENST00000610140 KRT32Q14532 448 aa17.31■□□□□ 0.36
NT5C3A-213ENST00000610140 BLOC1S2Q6QNY1 142 aa17.31■□□□□ 0.36
NT5C3A-213ENST00000610140 ATG9AQ7Z3C6 839 aa17.31■□□□□ 0.36
NT5C3A-213ENST00000610140 ZNF589Q86UQ0 364 aaPredicted RBP17.31■□□□□ 0.36
NT5C3A-213ENST00000610140 TRIM44Q96DX7 344 aaPredicted RBP17.31■□□□□ 0.36
NT5C3A-213ENST00000610140 TMOD3Q9NYL9 352 aa17.31■□□□□ 0.36
NT5C3A-213ENST00000610140 PALLDQ8WX93 1383 aa17.31■□□□□ 0.36
NT5C3A-213ENST00000610140 ZNF609O15014 1411 aa17.31■□□□□ 0.36
NT5C3A-213ENST00000610140 CIAO1O76071 339 aa17.3■□□□□ 0.36
NT5C3A-213ENST00000610140 F13A1P00488 732 aa17.3■□□□□ 0.36
NT5C3A-213ENST00000610140 RPS6KB1P23443 525 aa17.3■□□□□ 0.36
NT5C3A-213ENST00000610140 GJB2P29033 226 aa17.3■□□□□ 0.36
NT5C3A-213ENST00000610140 LARP6Q9BRS8 491 aaKnown RBP17.3■□□□□ 0.36
NT5C3A-213ENST00000610140 TEX13AQ9BXU3 409 aaPredicted RBP17.3■□□□□ 0.36
NT5C3A-213ENST00000610140 ZBTB3Q9H5J0 574 aa17.3■□□□□ 0.36
NT5C3A-213ENST00000610140 NSFL1CQ9UNZ2 370 aaKnown RBP17.3■□□□□ 0.36
NT5C3A-213ENST00000610140 ANKRD36CQ5JPF3 1778 aa17.3■□□□□ 0.36
NT5C3A-213ENST00000610140 WNK3Q9BYP7 1800 aa17.3■□□□□ 0.36
NT5C3A-213ENST00000610140 LRP6O75581 1613 aa17.3■□□□□ 0.36
NT5C3A-213ENST00000610140 VSIG10Q8N0Z9 540 aa17.29■□□□□ 0.36
NT5C3A-213ENST00000610140 EDC3Q96F86 508 aaKnown RBP17.29■□□□□ 0.36
NT5C3A-213ENST00000610140 DNAJC2Q99543 621 aaKnown RBP17.29■□□□□ 0.36
NT5C3A-213ENST00000610140 ISCA1Q9BUE6 129 aa17.29■□□□□ 0.36
NT5C3A-213ENST00000610140 LAMA4Q16363 1823 aa17.29■□□□□ 0.36
NT5C3A-213ENST00000610140 SH3TC1Q8TE82 1336 aa17.29■□□□□ 0.36
NT5C3A-213ENST00000610140 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.29■□□□□ 0.36
NT5C3A-213ENST00000610140 PHF14O94880 888 aa17.29■□□□□ 0.36
NT5C3A-213ENST00000610140 PRIM1P49642 420 aaKnown RBP17.29■□□□□ 0.36
NT5C3A-213ENST00000610140 ME3Q16798 604 aa17.29■□□□□ 0.36
NT5C3A-213ENST00000610140 USP48Q86UV5 1035 aa17.29■□□□□ 0.36
NT5C3A-213ENST00000610140 KBTBD3Q8NAB2 608 aa17.29■□□□□ 0.36
NT5C3A-213ENST00000610140 EYA2O00167 538 aa17.28■□□□□ 0.36
NT5C3A-213ENST00000610140 CSPP1Q1MSJ5 1256 aa17.28■□□□□ 0.36
NT5C3A-213ENST00000610140 MCMDC2Q4G0Z9 681 aa17.28■□□□□ 0.36
NT5C3A-213ENST00000610140 RBSNQ9H1K0 784 aa17.28■□□□□ 0.36
NT5C3A-213ENST00000610140 ZNF219Q9P2Y4 722 aaPredicted RBP17.28■□□□□ 0.36
NT5C3A-213ENST00000610140 TPCN1Q9ULQ1 816 aa17.28■□□□□ 0.36
NT5C3A-213ENST00000610140 SYCE3A1L190 88 aa17.27■□□□□ 0.36
NT5C3A-213ENST00000610140 ST3GAL1Q11201 340 aa17.27■□□□□ 0.36
NT5C3A-213ENST00000610140 TRIM28Q13263 835 aaKnown RBP17.27■□□□□ 0.36
NT5C3A-213ENST00000610140 TCIRG1Q13488 830 aa17.27■□□□□ 0.36
NT5C3A-213ENST00000610140 CERKQ8TCT0 537 aa17.27■□□□□ 0.36
NT5C3A-213ENST00000610140 FBXO3Q9UK99 471 aa17.27■□□□□ 0.36
NT5C3A-213ENST00000610140 MYH3P11055 1940 aa17.27■□□□□ 0.35
NT5C3A-213ENST00000610140 ABCB7O75027 752 aa17.26■□□□□ 0.35
NT5C3A-213ENST00000610140 CLCN1P35523 988 aa17.26■□□□□ 0.35
NT5C3A-213ENST00000610140 CHRDL2Q6WN34 429 aa17.26■□□□□ 0.35
NT5C3A-213ENST00000610140 MTMR6Q9Y217 621 aa17.26■□□□□ 0.35
NT5C3A-213ENST00000610140 ESPNB1AK53 854 aa17.26■□□□□ 0.35
NT5C3A-213ENST00000610140 PDCP20941 246 aa17.26■□□□□ 0.35
NT5C3A-213ENST00000610140 KIF6Q6ZMV9 814 aa17.26■□□□□ 0.35
NT5C3A-213ENST00000610140 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.26■□□□□ 0.35
NT5C3A-213ENST00000610140 NEUROD6Q96NK8 337 aa17.26■□□□□ 0.35
NT5C3A-213ENST00000610140 HELLSQ9NRZ9 838 aa17.26■□□□□ 0.35
NT5C3A-213ENST00000610140 CNPY2Q9Y2B0 182 aa17.26■□□□□ 0.35
NT5C3A-213ENST00000610140 DISP2A7MBM2 1401 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms