RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 XKR5Q6UX68 686 aa6.93□□□□□ -1.3
RNU6-88P-201ENST00000606801 C11orf16Q9NQ32 467 aa6.93□□□□□ -1.3
RNU6-88P-201ENST00000606801 ENAMQ9NRM1 1142 aa6.93□□□□□ -1.3
RNU6-88P-201ENST00000606801 FAM13BQ9NYF5 915 aa6.93□□□□□ -1.3
RNU6-88P-201ENST00000606801 TREHO43280 583 aa6.92□□□□□ -1.3
RNU6-88P-201ENST00000606801 XYLBO75191 536 aa6.92□□□□□ -1.3
RNU6-88P-201ENST00000606801 TARSP26639 723 aaKnown RBP6.92□□□□□ -1.3
RNU6-88P-201ENST00000606801 C8orf34Q49A92 452 aa6.92□□□□□ -1.3
RNU6-88P-201ENST00000606801 ZFATQ9P243 1243 aa6.92□□□□□ -1.3
RNU6-88P-201ENST00000606801 GDF2Q9UK05 429 aaPredicted RBP6.92□□□□□ -1.3
RNU6-88P-201ENST00000606801 UBAP1LF5GYI3 381 aa6.91□□□□□ -1.3
RNU6-88P-201ENST00000606801 OIP5O43482 229 aa6.91□□□□□ -1.3
RNU6-88P-201ENST00000606801 SASH3O75995 380 aa6.91□□□□□ -1.3
RNU6-88P-201ENST00000606801 EPB42P16452 691 aa6.91□□□□□ -1.3
RNU6-88P-201ENST00000606801 USP5P45974 858 aa6.91□□□□□ -1.3
RNU6-88P-201ENST00000606801 CCINQ13939 588 aa6.91□□□□□ -1.3
RNU6-88P-201ENST00000606801 C1orf229Q6ZS94 237 aaPredicted RBP6.91□□□□□ -1.3
RNU6-88P-201ENST00000606801 NIF3L1Q9GZT8 377 aa6.91□□□□□ -1.3
RNU6-88P-201ENST00000606801 TMEM63CQ9P1W3 806 aa6.91□□□□□ -1.3
RNU6-88P-201ENST00000606801 KLF15Q9UIH9 416 aa6.91□□□□□ -1.3
RNU6-88P-201ENST00000606801 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.91□□□□□ -1.3
RNU6-88P-201ENST00000606801 ARAFP10398 606 aa6.9□□□□□ -1.3
RNU6-88P-201ENST00000606801 SPEM2Q0P670 501 aa6.9□□□□□ -1.3
RNU6-88P-201ENST00000606801 RAB44Q7Z6P3 723 aaPredicted RBP6.9□□□□□ -1.3
RNU6-88P-201ENST00000606801 ZSCAN29Q8IWY8 852 aaPredicted RBP6.9□□□□□ -1.3
RNU6-88P-201ENST00000606801 GOLGA6L1Q8N7Z2 621 aa6.9□□□□□ -1.3
RNU6-88P-201ENST00000606801 FOXD4L4Q8WXT5 416 aaPredicted RBP6.9□□□□□ -1.3
RNU6-88P-201ENST00000606801 ALKBH8Q96BT7 664 aaKnown RBP6.9□□□□□ -1.3
RNU6-88P-201ENST00000606801 ELP3Q9H9T3 547 aa6.9□□□□□ -1.3
RNU6-88P-201ENST00000606801 CNTN3Q9P232 1028 aa6.9□□□□□ -1.3
RNU6-88P-201ENST00000606801 TNFRSF21O75509 655 aa6.89□□□□□ -1.31
RNU6-88P-201ENST00000606801 PCSK2P16519 638 aa6.89□□□□□ -1.31
RNU6-88P-201ENST00000606801 TAGLNQ01995 201 aaKnown RBP6.89□□□□□ -1.31
RNU6-88P-201ENST00000606801 FMR1Q06787 632 aaKnown RBP eCLIP6.89□□□□□ -1.31
RNU6-88P-201ENST00000606801 EHHADHQ08426 723 aa6.89□□□□□ -1.31
RNU6-88P-201ENST00000606801 PDE3BQ13370 1112 aa6.89□□□□□ -1.31
RNU6-88P-201ENST00000606801 ORC1Q13415 861 aa6.89□□□□□ -1.31
RNU6-88P-201ENST00000606801 PDE12Q6L8Q7 609 aaKnown RBP6.89□□□□□ -1.31
RNU6-88P-201ENST00000606801 KRT25Q7Z3Z0 450 aa6.89□□□□□ -1.31
RNU6-88P-201ENST00000606801 FBXO33Q7Z6M2 555 aa6.89□□□□□ -1.31
RNU6-88P-201ENST00000606801 NLRP13Q86W25 1043 aa6.89□□□□□ -1.31
RNU6-88P-201ENST00000606801 DMRTB1Q96MA1 342 aa6.89□□□□□ -1.31
RNU6-88P-201ENST00000606801 CHRDQ9H2X0 955 aa6.89□□□□□ -1.31
RNU6-88P-201ENST00000606801 FOXD3Q9UJU5 478 aaPredicted RBP6.89□□□□□ -1.31
RNU6-88P-201ENST00000606801 GGA1Q9UJY5 639 aa6.89□□□□□ -1.31
RNU6-88P-201ENST00000606801 FNDC3AQ9Y2H6 1198 aaKnown RBP6.89□□□□□ -1.31
RNU6-88P-201ENST00000606801 MMP20O60882 483 aa6.88□□□□□ -1.31
RNU6-88P-201ENST00000606801 RPLP1P05386 114 aaKnown RBP6.88□□□□□ -1.31
RNU6-88P-201ENST00000606801 P4HBP07237 508 aaKnown RBP6.88□□□□□ -1.31
RNU6-88P-201ENST00000606801 PLCB3Q01970 1234 aa6.88□□□□□ -1.31
RNU6-88P-201ENST00000606801 KCNMA1Q12791 1236 aa6.88□□□□□ -1.31
RNU6-88P-201ENST00000606801 SLCO4C1Q6ZQN7 724 aa6.88□□□□□ -1.31
RNU6-88P-201ENST00000606801 GALNT6Q8NCL4 622 aa6.88□□□□□ -1.31
RNU6-88P-201ENST00000606801 NEDD1Q8NHV4 660 aa6.88□□□□□ -1.31
RNU6-88P-201ENST00000606801 TMC1Q8TDI8 760 aa6.88□□□□□ -1.31
RNU6-88P-201ENST00000606801 EDARADDQ8WWZ3 215 aa6.88□□□□□ -1.31
RNU6-88P-201ENST00000606801 AVENQ9NQS1 362 aaPredicted RBP6.88□□□□□ -1.31
RNU6-88P-201ENST00000606801 SHISA8B8ZZ34 492 aa6.87□□□□□ -1.31
RNU6-88P-201ENST00000606801 CYP2E1P05181 493 aaPredicted RBP6.87□□□□□ -1.31
RNU6-88P-201ENST00000606801 ERCC3P19447 782 aa6.87□□□□□ -1.31
RNU6-88P-201ENST00000606801 GSK3AP49840 483 aa6.87□□□□□ -1.31
RNU6-88P-201ENST00000606801 USPL1Q5W0Q7 1092 aa6.87□□□□□ -1.31
RNU6-88P-201ENST00000606801 ZNF438Q7Z4V0 828 aa6.87□□□□□ -1.31
RNU6-88P-201ENST00000606801 C1orf127Q8N9H9 656 aa6.87□□□□□ -1.31
RNU6-88P-201ENST00000606801 SETDB2Q96T68 719 aa6.87□□□□□ -1.31
RNU6-88P-201ENST00000606801 WWC3Q9ULE0 1092 aa6.87□□□□□ -1.31
RNU6-88P-201ENST00000606801 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.87□□□□□ -1.31
RNU6-88P-201ENST00000606801 NEURL1BA8MQ27 555 aa6.86□□□□□ -1.31
RNU6-88P-201ENST00000606801 ZBTB42B2RXF5 422 aa6.86□□□□□ -1.31
RNU6-88P-201ENST00000606801 RNF225M0QZC1 329 aaPredicted RBP6.86□□□□□ -1.31
RNU6-88P-201ENST00000606801 EPXP11678 715 aa6.86□□□□□ -1.31
RNU6-88P-201ENST00000606801 NFKB1P19838 968 aa6.86□□□□□ -1.31
RNU6-88P-201ENST00000606801 COL19A1Q14993 1142 aa6.86□□□□□ -1.31
RNU6-88P-201ENST00000606801 ZNF468Q5VIY5 522 aaPredicted RBP6.86□□□□□ -1.31
RNU6-88P-201ENST00000606801 BHMTQ93088 406 aa6.86□□□□□ -1.31
RNU6-88P-201ENST00000606801 SCARF2Q96GP6 870 aaPredicted RBP6.86□□□□□ -1.31
RNU6-88P-201ENST00000606801 MDFIQ99750 246 aa6.86□□□□□ -1.31
RNU6-88P-201ENST00000606801 ABI2Q9NYB9 513 aaPredicted RBP6.86□□□□□ -1.31
RNU6-88P-201ENST00000606801 PRR12Q9ULL5 1215 aa6.86□□□□□ -1.31
RNU6-88P-201ENST00000606801 EIF1AYO14602 144 aaKnown RBP6.85□□□□□ -1.31
RNU6-88P-201ENST00000606801 MAP3K6O95382 1288 aa6.85□□□□□ -1.31
RNU6-88P-201ENST00000606801 ADH6P28332 368 aa6.85□□□□□ -1.31
RNU6-88P-201ENST00000606801 PCBP4P57723 403 aaKnown RBP6.85□□□□□ -1.31
RNU6-88P-201ENST00000606801 COL13A1Q5TAT6 717 aaPredicted RBP6.85□□□□□ -1.31
RNU6-88P-201ENST00000606801 SYT9Q86SS6 491 aa6.85□□□□□ -1.31
RNU6-88P-201ENST00000606801 FCHSD1Q86WN1 690 aa6.85□□□□□ -1.31
RNU6-88P-201ENST00000606801 OR13H1Q8NG92 308 aa6.85□□□□□ -1.31
RNU6-88P-201ENST00000606801 ZNF428Q96B54 188 aa6.85□□□□□ -1.31
RNU6-88P-201ENST00000606801 CSRNP1Q96S65 589 aa6.85□□□□□ -1.31
RNU6-88P-201ENST00000606801 ZFYVE28Q9HCC9 887 aa6.85□□□□□ -1.31
RNU6-88P-201ENST00000606801 RNF19AQ9NV58 838 aa6.85□□□□□ -1.31
RNU6-88P-201ENST00000606801 TLR7Q9NYK1 1049 aaKnown RBP6.85□□□□□ -1.31
RNU6-88P-201ENST00000606801 CNTNAP5Q8WYK1 1306 aa6.84□□□□□ -1.31
RNU6-88P-201ENST00000606801 EREGO14944 169 aa6.84□□□□□ -1.31
RNU6-88P-201ENST00000606801 RARAP10276 462 aa6.84□□□□□ -1.31
RNU6-88P-201ENST00000606801 ENOX2Q16206 610 aaKnown RBP6.84□□□□□ -1.31
RNU6-88P-201ENST00000606801 EFCC1Q9HA90 598 aa6.84□□□□□ -1.31
RNU6-88P-201ENST00000606801 MAPK8P45983 427 aa6.83□□□□□ -1.32
RNU6-88P-201ENST00000606801 RASSF7Q02833 373 aa6.83□□□□□ -1.32
RNU6-88P-201ENST00000606801 BEND7Q8N7W2 519 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms