RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 H2AFB1P0C5Y9 115 aa5.42□□□□□ -1.54
HMGB1P50-201ENST00000605814 H2AFB2P0C5Z0 115 aa5.42□□□□□ -1.54
HMGB1P50-201ENST00000605814 NFKB1P19838 968 aa5.42□□□□□ -1.54
HMGB1P50-201ENST00000605814 RASA1P20936 1047 aa5.42□□□□□ -1.54
HMGB1P50-201ENST00000605814 CLDN10P78369 228 aa5.42□□□□□ -1.54
HMGB1P50-201ENST00000605814 ADGRE1Q14246 886 aa5.42□□□□□ -1.54
HMGB1P50-201ENST00000605814 C20orf204Q6ZNR8 217 aa5.42□□□□□ -1.54
HMGB1P50-201ENST00000605814 DMRTC2Q8IXT2 367 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P50-201ENST00000605814 HINFPQ9BQA5 517 aa5.42□□□□□ -1.54
HMGB1P50-201ENST00000605814 TOP2AP11388 1531 aaKnown RBP5.42□□□□□ -1.54
HMGB1P50-201ENST00000605814 RUSC2Q8N2Y8 1516 aa5.42□□□□□ -1.54
HMGB1P50-201ENST00000605814 CPB1P15086 417 aa5.41□□□□□ -1.54
HMGB1P50-201ENST00000605814 SELPP16109 830 aa5.41□□□□□ -1.54
HMGB1P50-201ENST00000605814 ARID4AP29374 1257 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P50-201ENST00000605814 FLIIQ13045 1269 aa5.41□□□□□ -1.54
HMGB1P50-201ENST00000605814 CCINQ13939 588 aa5.41□□□□□ -1.54
HMGB1P50-201ENST00000605814 COL9A3Q14050 684 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P50-201ENST00000605814 LRP8Q14114 963 aa5.41□□□□□ -1.54
HMGB1P50-201ENST00000605814 HDGFL1Q5TGJ6 251 aa5.41□□□□□ -1.54
HMGB1P50-201ENST00000605814 SHISA2Q6UWI4 295 aa5.41□□□□□ -1.54
HMGB1P50-201ENST00000605814 FAM35AQ86V20 835 aa5.41□□□□□ -1.54
HMGB1P50-201ENST00000605814 LENG1Q96BZ8 264 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P50-201ENST00000605814 SCRIBQ14160 1630 aa5.41□□□□□ -1.54
HMGB1P50-201ENST00000605814 ATAD2Q6PL18 1390 aa5.41□□□□□ -1.54
HMGB1P50-201ENST00000605814 POM121CA8CG34 1229 aa5.4□□□□□ -1.54
HMGB1P50-201ENST00000605814 TCERG1O14776 1098 aaKnown RBP5.4□□□□□ -1.54
HMGB1P50-201ENST00000605814 ZBTB7BO15156 539 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P50-201ENST00000605814 SEC13P55735 322 aa5.4□□□□□ -1.54
HMGB1P50-201ENST00000605814 FOXD4L6Q3SYB3 417 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P50-201ENST00000605814 ELMSAN1Q6PJG2 1045 aa5.4□□□□□ -1.54
HMGB1P50-201ENST00000605814 LARP1Q6PKG0 1096 aaKnown RBP5.4□□□□□ -1.54
HMGB1P50-201ENST00000605814 FOXD4L3Q6VB84 417 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P50-201ENST00000605814 KRT25Q7Z3Z0 450 aa5.4□□□□□ -1.54
HMGB1P50-201ENST00000605814 WFDC8Q8IUA0 241 aa5.4□□□□□ -1.54
HMGB1P50-201ENST00000605814 FMR1NBQ8N0W7 255 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P50-201ENST00000605814 SIX5Q8N196 739 aa5.4□□□□□ -1.54
HMGB1P50-201ENST00000605814 GAS2L2Q8NHY3 880 aa5.4□□□□□ -1.54
HMGB1P50-201ENST00000605814 C7orf43Q8WVR3 580 aa5.4□□□□□ -1.54
HMGB1P50-201ENST00000605814 VTI1AQ96AJ9 217 aa5.4□□□□□ -1.54
HMGB1P50-201ENST00000605814 ZBED9Q6R2W3 1325 aa5.4□□□□□ -1.55
HMGB1P50-201ENST00000605814 CCNB3Q8WWL7 1395 aa5.4□□□□□ -1.55
HMGB1P50-201ENST00000605814 SETD5Q9C0A6 1442 aa5.4□□□□□ -1.55
HMGB1P50-201ENST00000605814 SYNJ1O43426 1573 aa5.39□□□□□ -1.55
HMGB1P50-201ENST00000605814 AFF1P51825 1210 aaKnown RBP5.39□□□□□ -1.55
HMGB1P50-201ENST00000605814 RTN1Q16799 776 aa5.39□□□□□ -1.55
HMGB1P50-201ENST00000605814 C2orf49Q9BVC5 232 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P50-201ENST00000605814 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.39□□□□□ -1.55
HMGB1P50-201ENST00000605814 SMG6Q86US8 1419 aaKnown RBP5.39□□□□□ -1.55
HMGB1P50-201ENST00000605814 TGFBR3LH3BV60 316 aa5.38□□□□□ -1.55
HMGB1P50-201ENST00000605814 RRP9O43818 475 aaKnown RBP5.38□□□□□ -1.55
HMGB1P50-201ENST00000605814 NEFMP07197 916 aa5.38□□□□□ -1.55
HMGB1P50-201ENST00000605814 HNRNPUQ00839 825 aaKnown RBP eCLIP5.38□□□□□ -1.55
HMGB1P50-201ENST00000605814 IER5Q5VY09 327 aa5.38□□□□□ -1.55
HMGB1P50-201ENST00000605814 MSL1Q68DK7 614 aa5.38□□□□□ -1.55
HMGB1P50-201ENST00000605814 STAG2Q8N3U4 1231 aa5.38□□□□□ -1.55
HMGB1P50-201ENST00000605814 GSX2Q9BZM3 304 aa5.38□□□□□ -1.55
HMGB1P50-201ENST00000605814 ZMYND15Q9H091 742 aa5.38□□□□□ -1.55
HMGB1P50-201ENST00000605814 RAB3GAP2Q9H2M9 1393 aa5.38□□□□□ -1.55
HMGB1P50-201ENST00000605814 ERICH3Q5RHP9 1530 aa5.38□□□□□ -1.55
HMGB1P50-201ENST00000605814 RARAP10276 462 aa5.37□□□□□ -1.55
HMGB1P50-201ENST00000605814 EIF2AK2P19525 551 aaKnown RBP5.37□□□□□ -1.55
HMGB1P50-201ENST00000605814 B4GALNT3Q6L9W6 998 aa5.37□□□□□ -1.55
HMGB1P50-201ENST00000605814 DTWD1Q8N5C7 304 aa5.37□□□□□ -1.55
HMGB1P50-201ENST00000605814 UCN2Q96RP3 112 aa5.37□□□□□ -1.55
HMGB1P50-201ENST00000605814 NAGPAQ9UK23 515 aa5.37□□□□□ -1.55
HMGB1P50-201ENST00000605814 FHAD1B1AJZ9 1412 aa5.37□□□□□ -1.55
HMGB1P50-201ENST00000605814 C21orf2O43822 256 aa5.36□□□□□ -1.55
HMGB1P50-201ENST00000605814 IREB2P48200 963 aaKnown RBP5.36□□□□□ -1.55
HMGB1P50-201ENST00000605814 IDH3AP50213 366 aa5.36□□□□□ -1.55
HMGB1P50-201ENST00000605814 ARSDP51689 593 aa5.36□□□□□ -1.55
HMGB1P50-201ENST00000605814 MLLT1Q03111 559 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P50-201ENST00000605814 POTEAQ6S8J7 498 aa5.36□□□□□ -1.55
HMGB1P50-201ENST00000605814 DHX32Q7L7V1 743 aaKnown RBP5.36□□□□□ -1.55
HMGB1P50-201ENST00000605814 ADAMTS19Q8TE59 1207 aa5.36□□□□□ -1.55
HMGB1P50-201ENST00000605814 BACH2Q9BYV9 841 aa5.36□□□□□ -1.55
HMGB1P50-201ENST00000605814 RBSNQ9H1K0 784 aa5.36□□□□□ -1.55
HMGB1P50-201ENST00000605814 PODXL2Q9NZ53 605 aa5.36□□□□□ -1.55
HMGB1P50-201ENST00000605814 CENPJQ9HC77 1338 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P50-201ENST00000605814 PEG3Q9GZU2 1588 aa5.35□□□□□ -1.55
HMGB1P50-201ENST00000605814 HYAL3O43820 417 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P50-201ENST00000605814 LGR5O75473 907 aa5.35□□□□□ -1.55
HMGB1P50-201ENST00000605814 WFDC12Q8WWY7 111 aa5.35□□□□□ -1.55
HMGB1P50-201ENST00000605814 FRRS1LQ9P0K9 344 aa5.35□□□□□ -1.55
HMGB1P50-201ENST00000605814 NCOA2Q15596 1464 aa5.34□□□□□ -1.55
HMGB1P50-201ENST00000605814 PTCD1O75127 700 aaKnown RBP5.34□□□□□ -1.55
HMGB1P50-201ENST00000605814 DGKZQ13574 1117 aa5.34□□□□□ -1.55
HMGB1P50-201ENST00000605814 PERM1Q5SV97 790 aa5.34□□□□□ -1.55
HMGB1P50-201ENST00000605814 FBXO11Q86XK2 927 aa5.34□□□□□ -1.55
HMGB1P50-201ENST00000605814 DCAF11Q8TEB1 546 aa5.34□□□□□ -1.55
HMGB1P50-201ENST00000605814 GLMNQ92990 594 aa5.34□□□□□ -1.55
HMGB1P50-201ENST00000605814 SMG9Q9H0W8 520 aaKnown RBP5.34□□□□□ -1.55
HMGB1P50-201ENST00000605814 PCMTD2Q9NV79 361 aa5.34□□□□□ -1.55
HMGB1P50-201ENST00000605814 KLK14Q9P0G3 267 aa5.34□□□□□ -1.55
HMGB1P50-201ENST00000605814 TFIP11Q9UBB9 837 aaKnown RBP5.34□□□□□ -1.55
HMGB1P50-201ENST00000605814 BRPF3Q9ULD4 1205 aa5.34□□□□□ -1.55
HMGB1P50-201ENST00000605814 ARAP1Q96P48 1450 aa5.33□□□□□ -1.56
HMGB1P50-201ENST00000605814 SASH3O75995 380 aa5.33□□□□□ -1.56
HMGB1P50-201ENST00000605814 MAP3K6O95382 1288 aa5.33□□□□□ -1.56
HMGB1P50-201ENST00000605814 GHRHP01286 108 aa5.33□□□□□ -1.56
HMGB1P50-201ENST00000605814 IGFBP4P22692 258 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms