RNA–Protein interactions for RNA: ENST00000597777.1

FARP1-222, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

Gene FARP1, Length 3,841 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-222	ENST00000597777	SCN7A	Q01118	1682 aa		11.8	□□□□□ -0.52
FARP1-222	ENST00000597777	CRKL	P46109	303 aa	Known RBP	11.8	□□□□□ -0.52
FARP1-222	ENST00000597777	EIF5	P55010	431 aa	Known RBP	11.8	□□□□□ -0.52
FARP1-222	ENST00000597777	TRIM28	Q13263	835 aa	Known RBP	11.8	□□□□□ -0.52
FARP1-222	ENST00000597777	MTX1	Q13505	466 aa		11.8	□□□□□ -0.52
FARP1-222	ENST00000597777	GCKR	Q14397	625 aa		11.8	□□□□□ -0.52
FARP1-222	ENST00000597777	HSP90AB3P	Q58FF7	597 aa		11.8	□□□□□ -0.52
FARP1-222	ENST00000597777	TTLL7	Q6ZT98	887 aa		11.8	□□□□□ -0.52
FARP1-222	ENST00000597777	ZGPAT	Q8N5A5	531 aa	Known RBP	11.8	□□□□□ -0.52
FARP1-222	ENST00000597777	MYD88	Q99836	296 aa		11.8	□□□□□ -0.52
FARP1-222	ENST00000597777	PA2G4	Q9UQ80	394 aa	Known RBP	11.8	□□□□□ -0.52
FARP1-222	ENST00000597777	ZBTB1	Q9Y2K1	713 aa		11.8	□□□□□ -0.52
FARP1-222	ENST00000597777	MYH14	Q7Z406	1995 aa	Known RBP	11.8	□□□□□ -0.52
FARP1-222	ENST00000597777	ATP8B2	P98198	1209 aa		11.8	□□□□□ -0.52
FARP1-222	ENST00000597777	BOLA2	Q9H3K6	86 aa		11.8	□□□□□ -0.52
FARP1-222	ENST00000597777	DCTPP1	Q9H773	170 aa		11.8	□□□□□ -0.52
FARP1-222	ENST00000597777	NUP98	P52948	1817 aa		11.8	□□□□□ -0.52
FARP1-222	ENST00000597777		K7ELQ4	463 aa	Predicted RBP	11.8	□□□□□ -0.52
FARP1-222	ENST00000597777	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.8	□□□□□ -0.52
FARP1-222	ENST00000597777	CCDC191	Q8NCU4	936 aa		11.8	□□□□□ -0.52
FARP1-222	ENST00000597777	C4B	P0C0L5	1744 aa		11.8	□□□□□ -0.52
FARP1-222	ENST00000597777	APP	P05067	770 aa		11.79	□□□□□ -0.52
FARP1-222	ENST00000597777		A0A087WZG4	1122 aa		11.79	□□□□□ -0.52
FARP1-222	ENST00000597777	NASP	P49321	788 aa	Predicted RBP	11.79	□□□□□ -0.52
FARP1-222	ENST00000597777	CWF19L2	Q2TBE0	894 aa	Known RBP	11.79	□□□□□ -0.52
FARP1-222	ENST00000597777	FSD1	Q9BTV5	496 aa		11.79	□□□□□ -0.52
FARP1-222	ENST00000597777	NBPF7	P0C2Y1	421 aa	Predicted RBP	11.79	□□□□□ -0.52
FARP1-222	ENST00000597777	NUCB1	Q02818	461 aa		11.79	□□□□□ -0.52
FARP1-222	ENST00000597777	KLHDC4	Q8TBB5	520 aa		11.79	□□□□□ -0.52
FARP1-222	ENST00000597777	ISCA1	Q9BUE6	129 aa		11.79	□□□□□ -0.52
FARP1-222	ENST00000597777	LRRCC1	Q9C099	1032 aa		11.79	□□□□□ -0.52
FARP1-222	ENST00000597777	ATP2B1	P20020	1258 aa		11.78	□□□□□ -0.52
FARP1-222	ENST00000597777	SDS	P20132	328 aa		11.78	□□□□□ -0.52
FARP1-222	ENST00000597777	TCIRG1	Q13488	830 aa		11.78	□□□□□ -0.52
FARP1-222	ENST00000597777	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.78	□□□□□ -0.52
FARP1-222	ENST00000597777	DDX11	Q96FC9	970 aa		11.78	□□□□□ -0.52
FARP1-222	ENST00000597777	ANTXR1	Q9H6X2	564 aa		11.78	□□□□□ -0.52
FARP1-222	ENST00000597777	RGS17	Q9UGC6	210 aa	Predicted RBP	11.78	□□□□□ -0.52
FARP1-222	ENST00000597777	SYCE3	A1L190	88 aa		11.78	□□□□□ -0.52
FARP1-222	ENST00000597777	SPC24	Q8NBT2	197 aa		11.78	□□□□□ -0.52
FARP1-222	ENST00000597777	CWC25	Q9NXE8	425 aa	Predicted RBP	11.78	□□□□□ -0.52
FARP1-222	ENST00000597777	TNS1	Q9HBL0	1735 aa	Known RBP	11.78	□□□□□ -0.52
FARP1-222	ENST00000597777	GNL2	Q13823	731 aa	Known RBP	11.78	□□□□□ -0.52
FARP1-222	ENST00000597777	POLA2	Q14181	598 aa		11.78	□□□□□ -0.52
FARP1-222	ENST00000597777	SLC27A3	Q5K4L6	730 aa		11.78	□□□□□ -0.52
FARP1-222	ENST00000597777	LINC00116	Q8NCU8	138 aa		11.78	□□□□□ -0.52
FARP1-222	ENST00000597777	SSH3	Q8TE77	659 aa		11.78	□□□□□ -0.52
FARP1-222	ENST00000597777	AACS	Q86V21	672 aa		11.77	□□□□□ -0.52
FARP1-222	ENST00000597777	FAM182B	Q5T319	152 aa		11.77	□□□□□ -0.53
FARP1-222	ENST00000597777	PTF1A	Q7RTS3	328 aa		11.77	□□□□□ -0.53
FARP1-222	ENST00000597777	CLASRP	Q8N2M8	674 aa	Known RBP	11.77	□□□□□ -0.53
FARP1-222	ENST00000597777	CCNL1	Q9UK58	526 aa	Predicted RBP	11.77	□□□□□ -0.53
FARP1-222	ENST00000597777	DZIP3	Q86Y13	1208 aa	Known RBP	11.77	□□□□□ -0.53
FARP1-222	ENST00000597777	LRRC2	Q9BYS8	371 aa		11.77	□□□□□ -0.53
FARP1-222	ENST00000597777	ZBTB3	Q9H5J0	574 aa		11.77	□□□□□ -0.53
FARP1-222	ENST00000597777		H7C1W4	665 aa		11.76	□□□□□ -0.53
FARP1-222	ENST00000597777	ZBTB9	Q96C00	473 aa		11.76	□□□□□ -0.53
FARP1-222	ENST00000597777	SMC3	Q9UQE7	1217 aa		11.76	□□□□□ -0.53
FARP1-222	ENST00000597777	R3HCC1	Q9Y3T6	440 aa	Known RBP	11.76	□□□□□ -0.53
FARP1-222	ENST00000597777	CD2BP2	O95400	341 aa	Known RBP	11.76	□□□□□ -0.53
FARP1-222	ENST00000597777	CASP7	P55210	303 aa		11.76	□□□□□ -0.53
FARP1-222	ENST00000597777	PKP1	Q13835	747 aa		11.76	□□□□□ -0.53
FARP1-222	ENST00000597777	LAMB2	P55268	1798 aa		11.76	□□□□□ -0.53
FARP1-222	ENST00000597777	WASHC4	Q2M389	1173 aa		11.76	□□□□□ -0.53
FARP1-222	ENST00000597777	ZNF592	Q92610	1267 aa		11.76	□□□□□ -0.53
FARP1-222	ENST00000597777	GRPEL1	Q9HAV7	217 aa		11.76	□□□□□ -0.53
FARP1-222	ENST00000597777		H3BQV1	296 aa		11.75	□□□□□ -0.53
FARP1-222	ENST00000597777	GUCY1B3	Q02153	619 aa		11.75	□□□□□ -0.53
FARP1-222	ENST00000597777	IFFO2	Q5TF58	517 aa		11.75	□□□□□ -0.53
FARP1-222	ENST00000597777	ERC2	O15083	957 aa		11.75	□□□□□ -0.53
FARP1-222	ENST00000597777	CAMK4	Q16566	473 aa		11.75	□□□□□ -0.53
FARP1-222	ENST00000597777	SNRK	Q9NRH2	765 aa		11.75	□□□□□ -0.53
FARP1-222	ENST00000597777	C4A	P0C0L4	1744 aa		11.75	□□□□□ -0.53
FARP1-222	ENST00000597777	RPS6KA4	O75676	772 aa		11.75	□□□□□ -0.53
FARP1-222	ENST00000597777	RABL6	Q3YEC7	729 aa	Predicted RBP	11.75	□□□□□ -0.53
FARP1-222	ENST00000597777	PPP1R42	Q7Z4L9	355 aa		11.75	□□□□□ -0.53
FARP1-222	ENST00000597777	GTF2E1	P29083	439 aa	Predicted RBP	11.74	□□□□□ -0.53
FARP1-222	ENST00000597777	CLEC4G	Q6UXB4	293 aa		11.74	□□□□□ -0.53
FARP1-222	ENST00000597777	CCDC83	Q8IWF9	413 aa		11.74	□□□□□ -0.53
FARP1-222	ENST00000597777	SUCLG2	Q96I99	432 aa		11.74	□□□□□ -0.53
FARP1-222	ENST00000597777	UBR3	Q6ZT12	1888 aa		11.74	□□□□□ -0.53
FARP1-222	ENST00000597777	PNMA6E	A0A0J9YXQ4	647 aa		11.74	□□□□□ -0.53
FARP1-222	ENST00000597777	CAMTA2	O94983	1202 aa		11.74	□□□□□ -0.53
FARP1-222	ENST00000597777	HSP90AB4P	Q58FF6	505 aa		11.74	□□□□□ -0.53
FARP1-222	ENST00000597777	PRPF40B	Q6NWY9	871 aa	Known RBP	11.74	□□□□□ -0.53
FARP1-222	ENST00000597777	BICD2	Q8TD16	824 aa		11.74	□□□□□ -0.53
FARP1-222	ENST00000597777	GPATCH3	Q96I76	525 aa		11.74	□□□□□ -0.53
FARP1-222	ENST00000597777	ZNF652	Q9Y2D9	606 aa		11.74	□□□□□ -0.53
FARP1-222	ENST00000597777	CDHR2	Q9BYE9	1310 aa		11.74	□□□□□ -0.53
FARP1-222	ENST00000597777	COL24A1	Q17RW2	1714 aa		11.74	□□□□□ -0.53
FARP1-222	ENST00000597777	PLSCR1	O15162	318 aa		11.74	□□□□□ -0.53
FARP1-222	ENST00000597777	RAB11FIP3	O75154	756 aa		11.74	□□□□□ -0.53
FARP1-222	ENST00000597777	PCCA	P05165	728 aa	Predicted RBP	11.74	□□□□□ -0.53
FARP1-222	ENST00000597777	XRCC6	P12956	609 aa	Known RBP eCLIP	11.74	□□□□□ -0.53
FARP1-222	ENST00000597777	MX1	P20591	662 aa		11.74	□□□□□ -0.53
FARP1-222	ENST00000597777	POTEA	Q6S8J7	498 aa		11.74	□□□□□ -0.53
FARP1-222	ENST00000597777	ZNF34	Q8IZ26	560 aa		11.74	□□□□□ -0.53
FARP1-222	ENST00000597777	NECAB1	Q8N987	351 aa		11.74	□□□□□ -0.53
FARP1-222	ENST00000597777	FAM184A	Q8NB25	1140 aa		11.74	□□□□□ -0.53
FARP1-222	ENST00000597777	KAZALD1	Q96I82	304 aa		11.74	□□□□□ -0.53

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