RNA–Protein interactions for RNA: ENST00000592354.5

CAPNS1-213, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-213ENST00000592354 HSPA1BP0DMV9 641 aaKnown RBP17.49■□□□□ 0.39
CAPNS1-213ENST00000592354 CALD1Q05682 793 aaKnown RBP17.49■□□□□ 0.39
CAPNS1-213ENST00000592354 MAP1SQ66K74 1059 aaPredicted RBP17.49■□□□□ 0.39
CAPNS1-213ENST00000592354 PNMA8AQ86V59 439 aaPredicted RBP17.49■□□□□ 0.39
CAPNS1-213ENST00000592354 BBOX1O75936 387 aa17.48■□□□□ 0.39
CAPNS1-213ENST00000592354 ITGBL1O95965 494 aaPredicted RBP17.48■□□□□ 0.39
CAPNS1-213ENST00000592354 EPS15P42566 896 aa17.48■□□□□ 0.39
CAPNS1-213ENST00000592354 GOLGA2Q08379 1002 aa17.48■□□□□ 0.39
CAPNS1-213ENST00000592354 SP8Q8IXZ3 490 aa17.48■□□□□ 0.39
CAPNS1-213ENST00000592354 MPNDQ8N594 471 aa17.48■□□□□ 0.39
CAPNS1-213ENST00000592354 C8orf58Q8NAV2 365 aa17.48■□□□□ 0.39
CAPNS1-213ENST00000592354 SUPT20HQ8NEM7 779 aa17.48■□□□□ 0.39
CAPNS1-213ENST00000592354 RTFDC1Q9BY42 306 aaPredicted RBP17.48■□□□□ 0.39
CAPNS1-213ENST00000592354 SPEF2Q9C093 1822 aa17.47■□□□□ 0.39
CAPNS1-213ENST00000592354 COL13A1Q5TAT6 717 aaPredicted RBP17.47■□□□□ 0.39
CAPNS1-213ENST00000592354 RIC3Q7Z5B4 369 aa17.47■□□□□ 0.39
CAPNS1-213ENST00000592354 CNTNAP1P78357 1384 aa17.47■□□□□ 0.39
CAPNS1-213ENST00000592354 CNTROBQ8N137 903 aa17.46■□□□□ 0.39
CAPNS1-213ENST00000592354 CELF1Q92879 486 aaKnown RBP17.46■□□□□ 0.39
CAPNS1-213ENST00000592354 TRPM7Q96QT4 1865 aa17.46■□□□□ 0.38
CAPNS1-213ENST00000592354 TMEM88BA6NKF7 163 aa17.45■□□□□ 0.38
CAPNS1-213ENST00000592354 IRS4O14654 1257 aaPredicted RBP17.45■□□□□ 0.38
CAPNS1-213ENST00000592354 KIAA2012Q0VF49 1180 aa17.45■□□□□ 0.38
CAPNS1-213ENST00000592354 TSR2Q969E8 191 aaKnown RBP17.45■□□□□ 0.38
CAPNS1-213ENST00000592354 MYD88Q99836 296 aa17.45■□□□□ 0.38
CAPNS1-213ENST00000592354 ZNRF3Q9ULT6 936 aa17.45■□□□□ 0.38
CAPNS1-213ENST00000592354 CXCL9Q07325 125 aa17.44■□□□□ 0.38
CAPNS1-213ENST00000592354 TSPYL6Q8N831 410 aa17.44■□□□□ 0.38
CAPNS1-213ENST00000592354 VPS33BQ9H267 617 aa17.44■□□□□ 0.38
CAPNS1-213ENST00000592354 RAD17O75943 681 aa17.43■□□□□ 0.38
CAPNS1-213ENST00000592354 GMPSP49915 693 aaPredicted RBP17.43■□□□□ 0.38
CAPNS1-213ENST00000592354 FMR1Q06787 632 aaKnown RBP eCLIP17.43■□□□□ 0.38
CAPNS1-213ENST00000592354 SF3B3Q15393 1217 aaKnown RBP17.43■□□□□ 0.38
CAPNS1-213ENST00000592354 GPRC5DQ9NZD1 345 aa17.43■□□□□ 0.38
CAPNS1-213ENST00000592354 MYH3P11055 1940 aa17.43■□□□□ 0.38
CAPNS1-213ENST00000592354 TRIM28Q13263 835 aaKnown RBP17.42■□□□□ 0.38
CAPNS1-213ENST00000592354 CCDC30Q5VVM6 783 aa17.42■□□□□ 0.38
CAPNS1-213ENST00000592354 TMC4Q7Z404 712 aa17.42■□□□□ 0.38
CAPNS1-213ENST00000592354 ZBTB38Q8NAP3 1195 aaPredicted RBP17.42■□□□□ 0.38
CAPNS1-213ENST00000592354 JARID2Q92833 1246 aaPredicted RBP17.42■□□□□ 0.38
CAPNS1-213ENST00000592354 NSFL1CQ9UNZ2 370 aaKnown RBP17.42■□□□□ 0.38
CAPNS1-213ENST00000592354 YDJCA8MPS7 323 aa17.41■□□□□ 0.38
CAPNS1-213ENST00000592354 GPSM2P81274 684 aa17.41■□□□□ 0.38
CAPNS1-213ENST00000592354 CIAPIN1Q6FI81 312 aa17.41■□□□□ 0.38
CAPNS1-213ENST00000592354 USP50Q70EL3 339 aaPredicted RBP17.41■□□□□ 0.38
CAPNS1-213ENST00000592354 GPR101Q96P66 508 aaPredicted RBP17.41■□□□□ 0.38
CAPNS1-213ENST00000592354 ADARB2Q9NS39 739 aaKnown RBP17.41■□□□□ 0.38
CAPNS1-213ENST00000592354 THSD7BQ9C0I4 1608 aa17.4■□□□□ 0.38
CAPNS1-213ENST00000592354 TRAF5O00463 557 aa17.4■□□□□ 0.38
CAPNS1-213ENST00000592354 RIMBP2O15034 1052 aa17.4■□□□□ 0.38
CAPNS1-213ENST00000592354 VEGFBP49765 207 aa17.4■□□□□ 0.38
CAPNS1-213ENST00000592354 CCDC85AQ96PX6 553 aaPredicted RBP17.4■□□□□ 0.38
CAPNS1-213ENST00000592354 BCL2L13Q9BXK5 485 aa17.4■□□□□ 0.38
CAPNS1-213ENST00000592354 DBNDD1Q9H9R9 158 aa17.4■□□□□ 0.38
CAPNS1-213ENST00000592354 MRS2Q9HD23 443 aa17.4■□□□□ 0.38
CAPNS1-213ENST00000592354 SEC31BQ9NQW1 1179 aa17.4■□□□□ 0.38
CAPNS1-213ENST00000592354 ABT1Q9ULW3 272 aaKnown RBP17.4■□□□□ 0.38
CAPNS1-213ENST00000592354 SHTN1A0MZ66 631 aa17.39■□□□□ 0.37
CAPNS1-213ENST00000592354 C6orf229H3BNL8 230 aa17.39■□□□□ 0.37
CAPNS1-213ENST00000592354 DDX58O95786 925 aaKnown RBP17.39■□□□□ 0.37
CAPNS1-213ENST00000592354 WASHC4Q2M389 1173 aa17.39■□□□□ 0.37
CAPNS1-213ENST00000592354 WWC1Q8IX03 1113 aa17.39■□□□□ 0.37
CAPNS1-213ENST00000592354 CCDC191Q8NCU4 936 aa17.39■□□□□ 0.37
CAPNS1-213ENST00000592354 METTL22Q9BUU2 404 aaPredicted RBP17.39■□□□□ 0.37
CAPNS1-213ENST00000592354 CWC25Q9NXE8 425 aaPredicted RBP17.39■□□□□ 0.37
CAPNS1-213ENST00000592354 MAP3K2Q9Y2U5 619 aa17.39■□□□□ 0.37
CAPNS1-213ENST00000592354 SCN9AQ15858 1988 aa17.39■□□□□ 0.37
CAPNS1-213ENST00000592354 PCCAP05165 728 aaPredicted RBP17.38■□□□□ 0.37
CAPNS1-213ENST00000592354 TNS4Q8IZW8 715 aa17.38■□□□□ 0.37
CAPNS1-213ENST00000592354 POLLQ9UGP5 575 aa17.38■□□□□ 0.37
CAPNS1-213ENST00000592354 CDHR2Q9BYE9 1310 aa17.38■□□□□ 0.37
CAPNS1-213ENST00000592354 RASSF10A6NK89 507 aa17.37■□□□□ 0.37
CAPNS1-213ENST00000592354 TNIP1Q15025 636 aa17.37■□□□□ 0.37
CAPNS1-213ENST00000592354 CCDC27Q2M243 656 aa17.37■□□□□ 0.37
CAPNS1-213ENST00000592354 TWISTNBQ3B726 338 aaPredicted RBP17.37■□□□□ 0.37
CAPNS1-213ENST00000592354 TRPM4Q8TD43 1214 aa17.37■□□□□ 0.37
CAPNS1-213ENST00000592354 STK31Q9BXU1 1019 aa17.37■□□□□ 0.37
CAPNS1-213ENST00000592354 ZBTB12Q9Y330 459 aaPredicted RBP17.37■□□□□ 0.37
CAPNS1-213ENST00000592354 PSME4Q14997 1843 aa17.37■□□□□ 0.37
CAPNS1-213ENST00000592354 PI4KAP2A4QPH2 592 aa17.36■□□□□ 0.37
CAPNS1-213ENST00000592354 FOXN1O15353 648 aa17.36■□□□□ 0.37
CAPNS1-213ENST00000592354 ECE2O60344 883 aa17.36■□□□□ 0.37
CAPNS1-213ENST00000592354 CAPN15O75808 1086 aa17.36■□□□□ 0.37
CAPNS1-213ENST00000592354 RPS8P62241 208 aaKnown RBP17.36■□□□□ 0.37
CAPNS1-213ENST00000592354 DOK7Q18PE1 504 aa17.36■□□□□ 0.37
CAPNS1-213ENST00000592354 PI4KAP1Q8N8J0 262 aa17.36■□□□□ 0.37
CAPNS1-213ENST00000592354 SALL2Q9Y467 1007 aaPredicted RBP17.36■□□□□ 0.37
CAPNS1-213ENST00000592354 PSMD14O00487 310 aa17.35■□□□□ 0.37
CAPNS1-213ENST00000592354 ANP32CO43423 234 aa17.35■□□□□ 0.37
CAPNS1-213ENST00000592354 PDE8AO60658 829 aa17.35■□□□□ 0.37
CAPNS1-213ENST00000592354 IGKV5-2P06315 115 aa17.35■□□□□ 0.37
CAPNS1-213ENST00000592354 DEFB115Q30KQ5 88 aa17.35■□□□□ 0.37
CAPNS1-213ENST00000592354 CCDC152Q4G0S7 254 aa17.35■□□□□ 0.37
CAPNS1-213ENST00000592354 PAXIP1Q6ZW49 1069 aaPredicted RBP17.35■□□□□ 0.37
CAPNS1-213ENST00000592354 G2E3Q7L622 706 aa17.35■□□□□ 0.37
CAPNS1-213ENST00000592354 MICALL2Q8IY33 904 aa17.35■□□□□ 0.37
CAPNS1-213ENST00000592354 TBC1D16Q8TBP0 767 aa17.35■□□□□ 0.37
CAPNS1-213ENST00000592354 GLIS2Q9BZE0 524 aaPredicted RBP17.35■□□□□ 0.37
CAPNS1-213ENST00000592354 FANCIQ9NVI1 1328 aa17.35■□□□□ 0.37
CAPNS1-213ENST00000592354 UFL1O94874 794 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms