RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 PARP10Q53GL7 1025 aa18.26■□□□□ 0.51
CDK5RAP3-236ENST00000584991 CASC1Q6TDU7 716 aa18.26■□□□□ 0.51
CDK5RAP3-236ENST00000584991 CLEC17AQ6ZS10 378 aa18.26■□□□□ 0.51
CDK5RAP3-236ENST00000584991 RFC4P35249 363 aa18.26■□□□□ 0.51
CDK5RAP3-236ENST00000584991 HSP90AB4PQ58FF6 505 aa18.26■□□□□ 0.51
CDK5RAP3-236ENST00000584991 ILDR1Q86SU0 546 aaPredicted RBP18.26■□□□□ 0.51
CDK5RAP3-236ENST00000584991 KLHDC4Q8TBB5 520 aa18.26■□□□□ 0.51
CDK5RAP3-236ENST00000584991 RGL2O15211 777 aa18.25■□□□□ 0.51
CDK5RAP3-236ENST00000584991 RFX5P48382 616 aaPredicted RBP18.25■□□□□ 0.51
CDK5RAP3-236ENST00000584991 OS9Q13438 667 aaPredicted RBP18.25■□□□□ 0.51
CDK5RAP3-236ENST00000584991 UTP14AQ9BVJ6 771 aaKnown RBP18.25■□□□□ 0.51
CDK5RAP3-236ENST00000584991 PLA2G12BQ9BX93 195 aa18.25■□□□□ 0.51
CDK5RAP3-236ENST00000584991 MYH3P11055 1940 aa18.25■□□□□ 0.51
CDK5RAP3-236ENST00000584991 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.24■□□□□ 0.51
CDK5RAP3-236ENST00000584991 IRS4O14654 1257 aaPredicted RBP18.24■□□□□ 0.51
CDK5RAP3-236ENST00000584991 SPRYD3Q8NCJ5 442 aa18.24■□□□□ 0.51
CDK5RAP3-236ENST00000584991 RHPN1Q8TCX5 695 aa18.24■□□□□ 0.51
CDK5RAP3-236ENST00000584991 ADRA2BP18089 450 aa18.24■□□□□ 0.51
CDK5RAP3-236ENST00000584991 HMGB2P26583 209 aaKnown RBP18.24■□□□□ 0.51
CDK5RAP3-236ENST00000584991 TBC1D9BQ66K14 1250 aa18.24■□□□□ 0.51
CDK5RAP3-236ENST00000584991 BICDL1Q6ZP65 573 aa18.24■□□□□ 0.51
CDK5RAP3-236ENST00000584991 OTUD7AQ8TE49 926 aaPredicted RBP18.24■□□□□ 0.51
CDK5RAP3-236ENST00000584991 KIF1BPQ96EK5 621 aa18.24■□□□□ 0.51
CDK5RAP3-236ENST00000584991 SIL1Q9H173 461 aa18.24■□□□□ 0.51
CDK5RAP3-236ENST00000584991 USP42Q9H9J4 1324 aaKnown RBP18.24■□□□□ 0.51
CDK5RAP3-236ENST00000584991 GSPT1P15170 499 aaKnown RBP18.23■□□□□ 0.51
CDK5RAP3-236ENST00000584991 MRE11P49959 708 aa18.23■□□□□ 0.51
CDK5RAP3-236ENST00000584991 PTPN12Q05209 780 aaKnown RBP18.23■□□□□ 0.51
CDK5RAP3-236ENST00000584991 G3BP1Q13283 466 aaKnown RBP eCLIP18.23■□□□□ 0.51
CDK5RAP3-236ENST00000584991 OSBPL3Q9H4L5 887 aa18.23■□□□□ 0.51
CDK5RAP3-236ENST00000584991 IL1RAPL2Q9NP60 686 aa18.23■□□□□ 0.51
CDK5RAP3-236ENST00000584991 COPRSQ9NQ92 184 aa18.23■□□□□ 0.51
CDK5RAP3-236ENST00000584991 SH3TC1Q8TE82 1336 aa18.23■□□□□ 0.51
CDK5RAP3-236ENST00000584991 RGPD3A6NKT7 1758 aaPredicted RBP18.22■□□□□ 0.51
CDK5RAP3-236ENST00000584991 RGPD4Q7Z3J3 1758 aa18.22■□□□□ 0.51
CDK5RAP3-236ENST00000584991 NTSR2O95665 410 aa18.22■□□□□ 0.51
CDK5RAP3-236ENST00000584991 TUBGCP6Q96RT7 1819 aa18.22■□□□□ 0.51
CDK5RAP3-236ENST00000584991 HSP90AA1P07900 732 aaKnown RBP18.22■□□□□ 0.51
CDK5RAP3-236ENST00000584991 SSFA2P28290 1259 aa18.22■□□□□ 0.51
CDK5RAP3-236ENST00000584991 TNPO1Q92973 898 aaKnown RBP18.22■□□□□ 0.51
CDK5RAP3-236ENST00000584991 CCDC85AQ96PX6 553 aaPredicted RBP18.22■□□□□ 0.51
CDK5RAP3-236ENST00000584991 PDE8AO60658 829 aa18.21■□□□□ 0.51
CDK5RAP3-236ENST00000584991 CSF1RP07333 972 aa18.21■□□□□ 0.51
CDK5RAP3-236ENST00000584991 NUTM1Q86Y26 1132 aa18.21■□□□□ 0.51
CDK5RAP3-236ENST00000584991 ERC1Q8IUD2 1116 aa18.21■□□□□ 0.51
CDK5RAP3-236ENST00000584991 CTSWP56202 376 aa18.2■□□□□ 0.5
CDK5RAP3-236ENST00000584991 ZNF827Q17R98 1081 aa18.2■□□□□ 0.5
CDK5RAP3-236ENST00000584991 TTLL11Q8NHH1 800 aa18.2■□□□□ 0.5
CDK5RAP3-236ENST00000584991 SETDB2Q96T68 719 aa18.2■□□□□ 0.5
CDK5RAP3-236ENST00000584991 USP26Q9BXU7 913 aa18.2■□□□□ 0.5
CDK5RAP3-236ENST00000584991 DDX60Q8IY21 1712 aaKnown RBP18.2■□□□□ 0.5
CDK5RAP3-236ENST00000584991 SASH1O94885 1247 aa18.2■□□□□ 0.5
CDK5RAP3-236ENST00000584991 REC8O95072 547 aa18.2■□□□□ 0.5
CDK5RAP3-236ENST00000584991 HCLS1P14317 486 aaPredicted RBP18.2■□□□□ 0.5
CDK5RAP3-236ENST00000584991 GOLGA6L22H0YM25 854 aa18.19■□□□□ 0.5
CDK5RAP3-236ENST00000584991 EN1Q05925 392 aaPredicted RBP18.19■□□□□ 0.5
CDK5RAP3-236ENST00000584991 CCDC57Q2TAC2 916 aa18.19■□□□□ 0.5
CDK5RAP3-236ENST00000584991 AKT1S1Q96B36 256 aa18.19■□□□□ 0.5
CDK5RAP3-236ENST00000584991 ZNF594Q96JF6 807 aaPredicted RBP18.19■□□□□ 0.5
CDK5RAP3-236ENST00000584991 TFCP2L1Q9NZI6 479 aa18.19■□□□□ 0.5
CDK5RAP3-236ENST00000584991 COL24A1Q17RW2 1714 aa18.18■□□□□ 0.5
CDK5RAP3-236ENST00000584991 XRCC6P12956 609 aaKnown RBP eCLIP18.18■□□□□ 0.5
CDK5RAP3-236ENST00000584991 EZH2Q15910 746 aaKnown RBP18.18■□□□□ 0.5
CDK5RAP3-236ENST00000584991 LAMB2P55268 1798 aa18.18■□□□□ 0.5
CDK5RAP3-236ENST00000584991 NUCB2P80303 420 aa18.18■□□□□ 0.5
CDK5RAP3-236ENST00000584991 CAMKK2Q96RR4 588 aa18.18■□□□□ 0.5
CDK5RAP3-236ENST00000584991 GREM2Q9H772 168 aa18.18■□□□□ 0.5
CDK5RAP3-236ENST00000584991 CWC22Q9HCG8 908 aaKnown RBP18.18■□□□□ 0.5
CDK5RAP3-236ENST00000584991 RTN4Q9NQC3 1192 aaKnown RBP18.18■□□□□ 0.5
CDK5RAP3-236ENST00000584991 SALL3Q9BXA9 1300 aa18.17■□□□□ 0.5
CDK5RAP3-236ENST00000584991 IFIT5Q13325 482 aaKnown RBP18.17■□□□□ 0.5
CDK5RAP3-236ENST00000584991 ERFEQ4G0M1 354 aa18.17■□□□□ 0.5
CDK5RAP3-236ENST00000584991 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.17■□□□□ 0.5
CDK5RAP3-236ENST00000584991 GYS1P13807 737 aa18.16■□□□□ 0.5
CDK5RAP3-236ENST00000584991 HSP90B1P14625 803 aaKnown RBP18.16■□□□□ 0.5
CDK5RAP3-236ENST00000584991 PDE1AP54750 535 aa18.16■□□□□ 0.5
CDK5RAP3-236ENST00000584991 SF3B2Q13435 895 aaKnown RBP18.16■□□□□ 0.5
CDK5RAP3-236ENST00000584991 CLASRPQ8N2M8 674 aaKnown RBP18.16■□□□□ 0.5
CDK5RAP3-236ENST00000584991 NYXQ9GZU5 481 aa18.16■□□□□ 0.5
CDK5RAP3-236ENST00000584991 MX1P20591 662 aa18.16■□□□□ 0.5
CDK5RAP3-236ENST00000584991 ITGA6P23229 1130 aa18.16■□□□□ 0.5
CDK5RAP3-236ENST00000584991 GTF2E1P29083 439 aaPredicted RBP18.16■□□□□ 0.5
CDK5RAP3-236ENST00000584991 NBPF5PQ86XG9 351 aaPredicted RBP18.16■□□□□ 0.5
CDK5RAP3-236ENST00000584991 SDSP20132 328 aa18.15■□□□□ 0.5
CDK5RAP3-236ENST00000584991 NFIXQ14938 502 aa18.15■□□□□ 0.5
CDK5RAP3-236ENST00000584991 TAF7LQ5H9L4 462 aa18.15■□□□□ 0.5
CDK5RAP3-236ENST00000584991 ANKRD18BA2A2Z9 1011 aa18.14■□□□□ 0.49
CDK5RAP3-236ENST00000584991 EYA2O00167 538 aa18.14■□□□□ 0.49
CDK5RAP3-236ENST00000584991 EPB41L2O43491 1005 aaKnown RBP18.14■□□□□ 0.49
CDK5RAP3-236ENST00000584991 ST18O60284 1047 aa18.14■□□□□ 0.49
CDK5RAP3-236ENST00000584991 TFCP2Q12800 502 aa18.14■□□□□ 0.49
CDK5RAP3-236ENST00000584991 LRRC24Q50LG9 513 aa18.14■□□□□ 0.49
CDK5RAP3-236ENST00000584991 TSHZ3Q63HK5 1081 aa18.14■□□□□ 0.49
CDK5RAP3-236ENST00000584991 TPTE2Q6XPS3 522 aa18.14■□□□□ 0.49
CDK5RAP3-236ENST00000584991 ATG9AQ7Z3C6 839 aa18.14■□□□□ 0.49
CDK5RAP3-236ENST00000584991 PUS3Q9BZE2 481 aaKnown RBP18.14■□□□□ 0.49
CDK5RAP3-236ENST00000584991 CASZ1Q86V15 1759 aa18.14■□□□□ 0.49
CDK5RAP3-236ENST00000584991 AACSQ86V21 672 aa18.14■□□□□ 0.49
CDK5RAP3-236ENST00000584991 COL23A1Q86Y22 540 aaPredicted RBP18.14■□□□□ 0.49
CDK5RAP3-236ENST00000584991 ERC2O15083 957 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms