RNA–Protein interactions for RNA: ENST00000583821.1

MSI2-218, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-218ENST00000583821 COL13A1Q5TAT6 717 aaPredicted RBP10.67□□□□□ -0.7
MSI2-218ENST00000583821 KIF6Q6ZMV9 814 aa10.67□□□□□ -0.7
MSI2-218ENST00000583821 C3orf67Q6ZVT6 689 aa10.67□□□□□ -0.7
MSI2-218ENST00000583821 PNISRQ8TF01 805 aaKnown RBP10.67□□□□□ -0.7
MSI2-218ENST00000583821 RIC1Q4ADV7 1423 aa10.67□□□□□ -0.7
MSI2-218ENST00000583821 GTPBP6O43824 516 aaPredicted RBP10.66□□□□□ -0.7
MSI2-218ENST00000583821 NTSR2O95665 410 aa10.66□□□□□ -0.7
MSI2-218ENST00000583821 CRY2Q49AN0 593 aa10.66□□□□□ -0.7
MSI2-218ENST00000583821 SUSD4Q5VX71 490 aa10.66□□□□□ -0.7
MSI2-218ENST00000583821 TSPYL4Q9UJ04 414 aa10.66□□□□□ -0.7
MSI2-218ENST00000583821 BOLA1Q9Y3E2 137 aa10.66□□□□□ -0.7
MSI2-218ENST00000583821 IBTKQ9P2D0 1353 aaPredicted RBP10.65□□□□□ -0.7
MSI2-218ENST00000583821 ERVV-1B6SEH8 477 aa10.65□□□□□ -0.7
MSI2-218ENST00000583821 TCERG1O14776 1098 aaKnown RBP10.65□□□□□ -0.7
MSI2-218ENST00000583821 IARSP41252 1262 aaKnown RBP10.65□□□□□ -0.7
MSI2-218ENST00000583821 LRP10Q7Z4F1 713 aa10.65□□□□□ -0.7
MSI2-218ENST00000583821 CCDC146Q8IYE0 955 aa10.65□□□□□ -0.7
MSI2-218ENST00000583821 SYNE4Q8N205 404 aa10.65□□□□□ -0.7
MSI2-218ENST00000583821 NECTIN2Q92692 538 aa10.65□□□□□ -0.7
MSI2-218ENST00000583821 L3MBTL3Q96JM7 780 aaPredicted RBP10.65□□□□□ -0.7
MSI2-218ENST00000583821 TAF1DQ9H5J8 278 aaPredicted RBP10.65□□□□□ -0.7
MSI2-218ENST00000583821 MKRN1Q9UHC7 482 aaKnown RBP10.65□□□□□ -0.7
MSI2-218ENST00000583821 COL4A1P02462 1669 aa10.65□□□□□ -0.7
MSI2-218ENST00000583821 TRPM7Q96QT4 1865 aa10.65□□□□□ -0.7
MSI2-218ENST00000583821 LRRC37AA6NMS7 1700 aa10.64□□□□□ -0.71
MSI2-218ENST00000583821 RNF123Q5XPI4 1314 aa10.64□□□□□ -0.71
MSI2-218ENST00000583821 HSPA1AP0DMV8 641 aaKnown RBP10.64□□□□□ -0.71
MSI2-218ENST00000583821 HSPA1BP0DMV9 641 aaKnown RBP10.64□□□□□ -0.71
MSI2-218ENST00000583821 EIF2S2P20042 333 aaKnown RBP10.64□□□□□ -0.71
MSI2-218ENST00000583821 RIPK4P57078 832 aa10.64□□□□□ -0.71
MSI2-218ENST00000583821 PDIA6Q15084 440 aa10.64□□□□□ -0.71
MSI2-218ENST00000583821 KRT24Q2M2I5 525 aa10.64□□□□□ -0.71
MSI2-218ENST00000583821 EAPPQ56P03 285 aaPredicted RBP10.64□□□□□ -0.71
MSI2-218ENST00000583821 ZNF34Q8IZ26 560 aa10.64□□□□□ -0.71
MSI2-218ENST00000583821 RPGRQ92834 1020 aaKnown RBP10.64□□□□□ -0.71
MSI2-218ENST00000583821 ZNF428Q96B54 188 aa10.64□□□□□ -0.71
MSI2-218ENST00000583821 NYXQ9GZU5 481 aa10.64□□□□□ -0.71
MSI2-218ENST00000583821 PASKQ96RG2 1323 aa10.63□□□□□ -0.71
MSI2-218ENST00000583821 PPEF1O14829 653 aaPredicted RBP10.63□□□□□ -0.71
MSI2-218ENST00000583821 ALDH1B1P30837 517 aa10.63□□□□□ -0.71
MSI2-218ENST00000583821 LDHDQ86WU2 507 aa10.63□□□□□ -0.71
MSI2-218ENST00000583821 MICALL2Q8IY33 904 aa10.63□□□□□ -0.71
MSI2-218ENST00000583821 RTKN2Q8IZC4 609 aa10.63□□□□□ -0.71
MSI2-218ENST00000583821 DUOX1Q9NRD9 1551 aa10.63□□□□□ -0.71
MSI2-218ENST00000583821 ERBB4Q15303 1308 aa10.62□□□□□ -0.71
MSI2-218ENST00000583821 IQCA1LA6NCM1 817 aa10.62□□□□□ -0.71
MSI2-218ENST00000583821 HOXA10P31260 410 aaPredicted RBP10.62□□□□□ -0.71
MSI2-218ENST00000583821 TMPOP42166 694 aaKnown RBP10.62□□□□□ -0.71
MSI2-218ENST00000583821 DDX10Q13206 875 aaKnown RBP10.62□□□□□ -0.71
MSI2-218ENST00000583821 NEUROD2Q15784 382 aa10.62□□□□□ -0.71
MSI2-218ENST00000583821 GIGYF2Q6Y7W6 1299 aaKnown RBP10.62□□□□□ -0.71
MSI2-218ENST00000583821 BBXQ8WY36 941 aaPredicted RBP10.62□□□□□ -0.71
MSI2-218ENST00000583821 HACL1Q9UJ83 578 aa10.62□□□□□ -0.71
MSI2-218ENST00000583821 GJA3Q9Y6H8 435 aa10.62□□□□□ -0.71
MSI2-218ENST00000583821 FZD9O00144 591 aa10.61□□□□□ -0.71
MSI2-218ENST00000583821 EPHX2P34913 555 aa10.61□□□□□ -0.71
MSI2-218ENST00000583821 AIMP1Q12904 312 aaKnown RBP10.61□□□□□ -0.71
MSI2-218ENST00000583821 RALBP1Q15311 655 aa10.61□□□□□ -0.71
MSI2-218ENST00000583821 PSMD1Q99460 953 aa10.61□□□□□ -0.71
MSI2-218ENST00000583821 PNNQ9H307 717 aaKnown RBP10.61□□□□□ -0.71
MSI2-218ENST00000583821 CNTNAP1P78357 1384 aa10.61□□□□□ -0.71
MSI2-218ENST00000583821 THSD7BQ9C0I4 1608 aa10.61□□□□□ -0.71
MSI2-218ENST00000583821 SPEF2Q9C093 1822 aa10.61□□□□□ -0.71
MSI2-218ENST00000583821 ABCC4O15439 1325 aa10.6□□□□□ -0.71
MSI2-218ENST00000583821 MYBBP1AQ9BQG0 1328 aaKnown RBP10.6□□□□□ -0.71
MSI2-218ENST00000583821 ITGBL1O95965 494 aaPredicted RBP10.6□□□□□ -0.71
MSI2-218ENST00000583821 MAP1SQ66K74 1059 aaPredicted RBP10.6□□□□□ -0.71
MSI2-218ENST00000583821 TMEM92Q6UXU6 159 aa10.6□□□□□ -0.71
MSI2-218ENST00000583821 TNS4Q8IZW8 715 aa10.6□□□□□ -0.71
MSI2-218ENST00000583821 GPC2Q8N158 579 aa10.6□□□□□ -0.71
MSI2-218ENST00000583821 XAGE3Q8WTP9 111 aa10.6□□□□□ -0.71
MSI2-218ENST00000583821 RBM17Q96I25 401 aaKnown RBP10.6□□□□□ -0.71
MSI2-218ENST00000583821 CRAMP1Q96RY5 1269 aa10.6□□□□□ -0.71
MSI2-218ENST00000583821 TMEM121BQ9BXQ6 578 aaPredicted RBP10.6□□□□□ -0.71
MSI2-218ENST00000583821 SCUBE2Q9NQ36 999 aa10.6□□□□□ -0.71
MSI2-218ENST00000583821 LAS1LQ9Y4W2 734 aaKnown RBP10.6□□□□□ -0.71
MSI2-218ENST00000583821 HCLS1P14317 486 aaPredicted RBP10.59□□□□□ -0.71
MSI2-218ENST00000583821 FMR1Q06787 632 aaKnown RBP eCLIP10.59□□□□□ -0.71
MSI2-218ENST00000583821 AOC3Q16853 763 aa10.59□□□□□ -0.71
MSI2-218ENST00000583821 PARP10Q53GL7 1025 aa10.59□□□□□ -0.71
MSI2-218ENST00000583821 COPS6Q7L5N1 327 aa10.59□□□□□ -0.71
MSI2-218ENST00000583821 PPP1R42Q7Z4L9 355 aa10.59□□□□□ -0.71
MSI2-218ENST00000583821 NLRP10Q86W26 655 aa10.59□□□□□ -0.71
MSI2-218ENST00000583821 LARGE2Q8N3Y3 721 aa10.59□□□□□ -0.71
MSI2-218ENST00000583821 JDP2Q8WYK2 163 aa10.59□□□□□ -0.71
MSI2-218ENST00000583821 UTP14AQ9BVJ6 771 aaKnown RBP10.59□□□□□ -0.71
MSI2-218ENST00000583821 CHPF2Q9P2E5 772 aa10.59□□□□□ -0.71
MSI2-218ENST00000583821 VEGFBP49765 207 aa10.58□□□□□ -0.72
MSI2-218ENST00000583821 SCNN1DP51172 638 aa10.58□□□□□ -0.72
MSI2-218ENST00000583821 EIF6P56537 245 aaKnown RBP10.58□□□□□ -0.72
MSI2-218ENST00000583821 LMOD3Q0VAK6 560 aa10.58□□□□□ -0.72
MSI2-218ENST00000583821 SLAIN1Q8ND83 568 aa10.58□□□□□ -0.72
MSI2-218ENST00000583821 TMEM88BA6NKF7 163 aa10.57□□□□□ -0.72
MSI2-218ENST00000583821 G3V3G9 751 aa10.57□□□□□ -0.72
MSI2-218ENST00000583821 FOXN1O15353 648 aa10.57□□□□□ -0.72
MSI2-218ENST00000583821 PPIP5K2O43314 1243 aa10.57□□□□□ -0.72
MSI2-218ENST00000583821 EPS15P42566 896 aa10.57□□□□□ -0.72
MSI2-218ENST00000583821 CC2D2BQ6DHV5 1058 aa10.57□□□□□ -0.72
MSI2-218ENST00000583821 MAMSTRQ6ZN01 415 aa10.57□□□□□ -0.72
MSI2-218ENST00000583821 PAXIP1Q6ZW49 1069 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms