RNA–Protein interactions for RNA: ENST00000578571.5

PTPRM-207, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 1,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-207ENST00000578571 NUDT16Q96DE0 195 aaKnown RBP8.34□□□□□ -1.07
PTPRM-207ENST00000578571 AVENQ9NQS1 362 aaPredicted RBP8.34□□□□□ -1.07
PTPRM-207ENST00000578571 PRR12Q9ULL5 1215 aa8.34□□□□□ -1.07
PTPRM-207ENST00000578571 WRNQ14191 1432 aaPredicted RBP eCLIP8.34□□□□□ -1.07
PTPRM-207ENST00000578571 XYLBO75191 536 aa8.33□□□□□ -1.08
PTPRM-207ENST00000578571 MZF1P28698 734 aaPredicted RBP8.33□□□□□ -1.08
PTPRM-207ENST00000578571 PCBP4P57723 403 aaKnown RBP8.33□□□□□ -1.08
PTPRM-207ENST00000578571 DNM1Q05193 864 aaKnown RBP8.33□□□□□ -1.08
PTPRM-207ENST00000578571 LYPD4Q6UWN0 246 aa8.33□□□□□ -1.08
PTPRM-207ENST00000578571 SYT9Q86SS6 491 aa8.33□□□□□ -1.08
PTPRM-207ENST00000578571 BHMTQ93088 406 aa8.33□□□□□ -1.08
PTPRM-207ENST00000578571 CCDC87Q9NVE4 849 aa8.33□□□□□ -1.08
PTPRM-207ENST00000578571 ZFATQ9P243 1243 aa8.33□□□□□ -1.08
PTPRM-207ENST00000578571 GGA1Q9UJY5 639 aa8.33□□□□□ -1.08
PTPRM-207ENST00000578571 DNMBPQ6XZF7 1577 aa8.32□□□□□ -1.08
PTPRM-207ENST00000578571 ZNF385CQ66K41 422 aaPredicted RBP8.32□□□□□ -1.08
PTPRM-207ENST00000578571 C1orf229Q6ZS94 237 aaPredicted RBP8.32□□□□□ -1.08
PTPRM-207ENST00000578571 FCHSD1Q86WN1 690 aa8.32□□□□□ -1.08
PTPRM-207ENST00000578571 MDFIQ99750 246 aa8.32□□□□□ -1.08
PTPRM-207ENST00000578571 POLIQ9UNA4 740 aa8.32□□□□□ -1.08
PTPRM-207ENST00000578571 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.32□□□□□ -1.08
PTPRM-207ENST00000578571 NEURL1BA8MQ27 555 aa8.31□□□□□ -1.08
PTPRM-207ENST00000578571 UBAP1LF5GYI3 381 aa8.31□□□□□ -1.08
PTPRM-207ENST00000578571 SIN3BO75182 1162 aa8.31□□□□□ -1.08
PTPRM-207ENST00000578571 SASH3O75995 380 aa8.31□□□□□ -1.08
PTPRM-207ENST00000578571 CELA2BP08218 269 aaPredicted RBP8.31□□□□□ -1.08
PTPRM-207ENST00000578571 NFKB1P19838 968 aa8.31□□□□□ -1.08
PTPRM-207ENST00000578571 TARSP26639 723 aaKnown RBP8.31□□□□□ -1.08
PTPRM-207ENST00000578571 ADH6P28332 368 aa8.31□□□□□ -1.08
PTPRM-207ENST00000578571 AAMPQ13685 434 aa8.31□□□□□ -1.08
PTPRM-207ENST00000578571 SLCO4C1Q6ZQN7 724 aa8.31□□□□□ -1.08
PTPRM-207ENST00000578571 KRT25Q7Z3Z0 450 aa8.31□□□□□ -1.08
PTPRM-207ENST00000578571 GOLGA6L1Q8N7Z2 621 aa8.31□□□□□ -1.08
PTPRM-207ENST00000578571 GGNBP2Q9H3C7 697 aa8.31□□□□□ -1.08
PTPRM-207ENST00000578571 EFCC1Q9HA90 598 aa8.31□□□□□ -1.08
PTPRM-207ENST00000578571 GDF2Q9UK05 429 aaPredicted RBP8.31□□□□□ -1.08
PTPRM-207ENST00000578571 WDR62O43379 1518 aa8.3□□□□□ -1.08
PTPRM-207ENST00000578571 THOC2Q8NI27 1593 aaKnown RBP8.3□□□□□ -1.08
PTPRM-207ENST00000578571 OIP5O43482 229 aa8.29□□□□□ -1.08
PTPRM-207ENST00000578571 MAP3K6O95382 1288 aa8.29□□□□□ -1.08
PTPRM-207ENST00000578571 BCRP11274 1271 aa8.29□□□□□ -1.08
PTPRM-207ENST00000578571 EPXP11678 715 aa8.29□□□□□ -1.08
PTPRM-207ENST00000578571 NEUROD1Q13562 356 aa8.29□□□□□ -1.08
PTPRM-207ENST00000578571 GJD3Q8N144 294 aa8.29□□□□□ -1.08
PTPRM-207ENST00000578571 ZSCAN1Q8NBB4 408 aa8.29□□□□□ -1.08
PTPRM-207ENST00000578571 TNFRSF25Q93038 417 aa8.29□□□□□ -1.08
PTPRM-207ENST00000578571 PNMA5Q96PV4 448 aa8.29□□□□□ -1.08
PTPRM-207ENST00000578571 TOPBP1Q92547 1522 aa8.29□□□□□ -1.08
PTPRM-207ENST00000578571 CUX2O14529 1486 aa8.28□□□□□ -1.08
PTPRM-207ENST00000578571 A6NHS1 94 aa8.28□□□□□ -1.08
PTPRM-207ENST00000578571 RPLP1P05386 114 aaKnown RBP8.28□□□□□ -1.08
PTPRM-207ENST00000578571 RARAP10276 462 aa8.28□□□□□ -1.08
PTPRM-207ENST00000578571 INSM1Q01101 510 aaPredicted RBP8.28□□□□□ -1.08
PTPRM-207ENST00000578571 NLRP13Q86W25 1043 aa8.28□□□□□ -1.08
PTPRM-207ENST00000578571 LRRC4BQ9NT99 713 aa8.28□□□□□ -1.08
PTPRM-207ENST00000578571 BIN2Q9UBW5 565 aaPredicted RBP8.28□□□□□ -1.08
PTPRM-207ENST00000578571 FNDC3AQ9Y2H6 1198 aaKnown RBP8.28□□□□□ -1.08
PTPRM-207ENST00000578571 TOP2BQ02880 1626 aa8.28□□□□□ -1.08
PTPRM-207ENST00000578571 BIVM-ERCC5R4GMW8 1640 aa8.28□□□□□ -1.08
PTPRM-207ENST00000578571 URB2Q14146 1524 aaKnown RBP8.28□□□□□ -1.08
PTPRM-207ENST00000578571 ADARB2-AS1A8MUL3 147 aa8.27□□□□□ -1.09
PTPRM-207ENST00000578571 SHISA8B8ZZ34 492 aa8.27□□□□□ -1.09
PTPRM-207ENST00000578571 PCSK2P16519 638 aa8.27□□□□□ -1.09
PTPRM-207ENST00000578571 PDE12Q6L8Q7 609 aaKnown RBP8.27□□□□□ -1.09
PTPRM-207ENST00000578571 XKR5Q6UX68 686 aa8.27□□□□□ -1.09
PTPRM-207ENST00000578571 SVOPQ8N4V2 548 aa8.27□□□□□ -1.09
PTPRM-207ENST00000578571 BRPF3Q9ULD4 1205 aa8.27□□□□□ -1.09
PTPRM-207ENST00000578571 CUX1P39880 1505 aa8.26□□□□□ -1.09
PTPRM-207ENST00000578571 NDUFB5O43674 189 aa8.26□□□□□ -1.09
PTPRM-207ENST00000578571 MMP20O60882 483 aa8.26□□□□□ -1.09
PTPRM-207ENST00000578571 ARHGEF15O94989 841 aa8.26□□□□□ -1.09
PTPRM-207ENST00000578571 USP5P45974 858 aa8.26□□□□□ -1.09
PTPRM-207ENST00000578571 C8orf34Q49A92 452 aa8.26□□□□□ -1.09
PTPRM-207ENST00000578571 SND1Q7KZF4 910 aaKnown RBP eCLIP8.26□□□□□ -1.09
PTPRM-207ENST00000578571 GALNT6Q8NCL4 622 aa8.26□□□□□ -1.09
PTPRM-207ENST00000578571 EDARADDQ8WWZ3 215 aa8.26□□□□□ -1.09
PTPRM-207ENST00000578571 ELP3Q9H9T3 547 aa8.26□□□□□ -1.09
PTPRM-207ENST00000578571 TMEM63CQ9P1W3 806 aa8.26□□□□□ -1.09
PTPRM-207ENST00000578571 ELOA3CA0A087WX78 387 aaPredicted RBP8.25□□□□□ -1.09
PTPRM-207ENST00000578571 ELOA3DA6NLF2 546 aaPredicted RBP8.25□□□□□ -1.09
PTPRM-207ENST00000578571 IGHA2P01877 340 aa8.25□□□□□ -1.09
PTPRM-207ENST00000578571 ADH7P40394 386 aa8.25□□□□□ -1.09
PTPRM-207ENST00000578571 ELOA3BQ3SY89 546 aa8.25□□□□□ -1.09
PTPRM-207ENST00000578571 DHX32Q7L7V1 743 aaKnown RBP8.25□□□□□ -1.09
PTPRM-207ENST00000578571 ELOA3Q8NG57 546 aa8.25□□□□□ -1.09
PTPRM-207ENST00000578571 DNAJB12Q9NXW2 375 aaKnown RBP8.25□□□□□ -1.09
PTPRM-207ENST00000578571 TLR7Q9NYK1 1049 aaKnown RBP8.25□□□□□ -1.09
PTPRM-207ENST00000578571 SYNJ1O43426 1573 aa8.24□□□□□ -1.09
PTPRM-207ENST00000578571 ZBTB42B2RXF5 422 aa8.24□□□□□ -1.09
PTPRM-207ENST00000578571 ZNF438Q7Z4V0 828 aa8.24□□□□□ -1.09
PTPRM-207ENST00000578571 FAM129BQ96TA1 746 aa8.24□□□□□ -1.09
PTPRM-207ENST00000578571 RBCK1Q9BYM8 510 aa8.24□□□□□ -1.09
PTPRM-207ENST00000578571 UBE2OQ9C0C9 1292 aaKnown RBP8.24□□□□□ -1.09
PTPRM-207ENST00000578571 IGFLR1Q9H665 355 aa8.24□□□□□ -1.09
PTPRM-207ENST00000578571 DCTN4Q9UJW0 460 aa8.24□□□□□ -1.09
PTPRM-207ENST00000578571 FGD5Q6ZNL6 1462 aa8.24□□□□□ -1.09
PTPRM-207ENST00000578571 IFT140Q96RY7 1462 aa8.24□□□□□ -1.09
PTPRM-207ENST00000578571 HOXD8P13378 290 aaPredicted RBP8.23□□□□□ -1.09
PTPRM-207ENST00000578571 MAP3K10Q02779 954 aa8.23□□□□□ -1.09
PTPRM-207ENST00000578571 EHHADHQ08426 723 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms