RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 UBR2Q8IWV8 1755 aa10.16□□□□□ -0.78
COPS3-215ENST00000578317 PSDA5PKW4 1024 aaPredicted RBP10.16□□□□□ -0.78
COPS3-215ENST00000578317 DDX58O95786 925 aaKnown RBP10.16□□□□□ -0.78
COPS3-215ENST00000578317 COPS6Q7L5N1 327 aa10.16□□□□□ -0.78
COPS3-215ENST00000578317 LINC00116Q8NCU8 138 aa10.16□□□□□ -0.78
COPS3-215ENST00000578317 REPIN1Q9BWE0 567 aaKnown RBP10.16□□□□□ -0.78
COPS3-215ENST00000578317 RPS6KA4O75676 772 aa10.15□□□□□ -0.78
COPS3-215ENST00000578317 ANXA1P04083 346 aa10.15□□□□□ -0.78
COPS3-215ENST00000578317 MYL6BP14649 208 aa10.15□□□□□ -0.78
COPS3-215ENST00000578317 CANXP27824 592 aaKnown RBP10.15□□□□□ -0.78
COPS3-215ENST00000578317 FKBP5Q13451 457 aaPredicted RBP10.15□□□□□ -0.78
COPS3-215ENST00000578317 ERICH6BQ5W0A0 696 aa10.15□□□□□ -0.78
COPS3-215ENST00000578317 KSR2Q6VAB6 950 aa10.15□□□□□ -0.78
COPS3-215ENST00000578317 ANKRD13DQ6ZTN6 518 aa10.15□□□□□ -0.78
COPS3-215ENST00000578317 CAMKK2Q96RR4 588 aa10.15□□□□□ -0.78
COPS3-215ENST00000578317 ZBTB1Q9Y2K1 713 aa10.15□□□□□ -0.78
COPS3-215ENST00000578317 ZNF831Q5JPB2 1677 aa10.15□□□□□ -0.79
COPS3-215ENST00000578317 VIRMAQ69YN4 1812 aaKnown RBP10.15□□□□□ -0.79
COPS3-215ENST00000578317 PI4KAP2A4QPH2 592 aa10.15□□□□□ -0.79
COPS3-215ENST00000578317 INTS3Q68E01 1043 aaKnown RBP10.15□□□□□ -0.79
COPS3-215ENST00000578317 PI4KAP1Q8N8J0 262 aa10.15□□□□□ -0.79
COPS3-215ENST00000578317 PLBD2Q8NHP8 589 aa10.15□□□□□ -0.79
COPS3-215ENST00000578317 XAGE3Q8WTP9 111 aa10.15□□□□□ -0.79
COPS3-215ENST00000578317 MARVELD3Q96A59 401 aa10.15□□□□□ -0.79
COPS3-215ENST00000578317 TMUB1Q9BVT8 246 aa10.15□□□□□ -0.79
COPS3-215ENST00000578317 GPCPD1Q9NPB8 672 aa10.15□□□□□ -0.79
COPS3-215ENST00000578317 ABCC4O15439 1325 aa10.14□□□□□ -0.79
COPS3-215ENST00000578317 ERVV-1B6SEH8 477 aa10.14□□□□□ -0.79
COPS3-215ENST00000578317 COL9A1P20849 921 aa10.14□□□□□ -0.79
COPS3-215ENST00000578317 SF3B2Q13435 895 aaKnown RBP10.14□□□□□ -0.79
COPS3-215ENST00000578317 AAMPQ13685 434 aa10.14□□□□□ -0.79
COPS3-215ENST00000578317 C20orf194Q5TEA3 1177 aa10.14□□□□□ -0.79
COPS3-215ENST00000578317 FTSJ3Q8IY81 847 aaKnown RBP10.14□□□□□ -0.79
COPS3-215ENST00000578317 DNAAF4Q8WXU2 420 aa10.14□□□□□ -0.79
COPS3-215ENST00000578317 IBTKQ9P2D0 1353 aaPredicted RBP10.13□□□□□ -0.79
COPS3-215ENST00000578317 BTAF1O14981 1849 aa10.13□□□□□ -0.79
COPS3-215ENST00000578317 A0A087WZG4 1122 aa10.13□□□□□ -0.79
COPS3-215ENST00000578317 NEFLP07196 543 aa10.13□□□□□ -0.79
COPS3-215ENST00000578317 RLBP1P12271 317 aa10.13□□□□□ -0.79
COPS3-215ENST00000578317 BAG6P46379 1132 aa10.13□□□□□ -0.79
COPS3-215ENST00000578317 CCT4P50991 539 aaKnown RBP10.13□□□□□ -0.79
COPS3-215ENST00000578317 KCNQ4P56696 695 aa10.13□□□□□ -0.79
COPS3-215ENST00000578317 SH3D19Q5HYK7 790 aa10.13□□□□□ -0.79
COPS3-215ENST00000578317 NPM2Q86SE8 214 aaKnown RBP10.13□□□□□ -0.79
COPS3-215ENST00000578317 CICQ96RK0 1608 aaPredicted RBP10.13□□□□□ -0.79
COPS3-215ENST00000578317 PIP4K2AP48426 406 aaPredicted RBP10.12□□□□□ -0.79
COPS3-215ENST00000578317 MDM2Q00987 491 aaPredicted RBP10.12□□□□□ -0.79
COPS3-215ENST00000578317 AIMP1Q12904 312 aaKnown RBP10.12□□□□□ -0.79
COPS3-215ENST00000578317 TRIM28Q13263 835 aaKnown RBP10.12□□□□□ -0.79
COPS3-215ENST00000578317 TTLL7Q6ZT98 887 aa10.12□□□□□ -0.79
COPS3-215ENST00000578317 RIC3Q7Z5B4 369 aa10.12□□□□□ -0.79
COPS3-215ENST00000578317 PANK1Q8TE04 598 aa10.12□□□□□ -0.79
COPS3-215ENST00000578317 CLUAP1Q96AJ1 413 aa10.12□□□□□ -0.79
COPS3-215ENST00000578317 METTL22Q9BUU2 404 aaPredicted RBP10.12□□□□□ -0.79
COPS3-215ENST00000578317 CHMP4BQ9H444 224 aaKnown RBP10.12□□□□□ -0.79
COPS3-215ENST00000578317 RTCBQ9Y3I0 505 aaKnown RBP10.12□□□□□ -0.79
COPS3-215ENST00000578317 KAT6BQ8WYB5 2073 aa10.12□□□□□ -0.79
COPS3-215ENST00000578317 F6X3S4 739 aa10.11□□□□□ -0.79
COPS3-215ENST00000578317 MVPQ14764 893 aaKnown RBP10.11□□□□□ -0.79
COPS3-215ENST00000578317 VARS2Q5ST30 1063 aaKnown RBP10.11□□□□□ -0.79
COPS3-215ENST00000578317 BEND3Q5T5X7 828 aa10.11□□□□□ -0.79
COPS3-215ENST00000578317 POTEEQ6S8J3 1075 aa10.11□□□□□ -0.79
COPS3-215ENST00000578317 TMEM57Q8N5G2 664 aa10.11□□□□□ -0.79
COPS3-215ENST00000578317 LINS1Q8NG48 757 aa10.11□□□□□ -0.79
COPS3-215ENST00000578317 FAM163AQ96GL9 167 aaPredicted RBP10.11□□□□□ -0.79
COPS3-215ENST00000578317 DDX19BQ9UMR2 479 aa10.11□□□□□ -0.79
COPS3-215ENST00000578317 TNNQ9UQP3 1299 aa10.11□□□□□ -0.79
COPS3-215ENST00000578317 MAP3K2Q9Y2U5 619 aa10.11□□□□□ -0.79
COPS3-215ENST00000578317 ADCY9O60503 1353 aa10.11□□□□□ -0.79
COPS3-215ENST00000578317 MAP3K15Q6ZN16 1313 aa10.11□□□□□ -0.79
COPS3-215ENST00000578317 ZBTB7BO15156 539 aaPredicted RBP10.11□□□□□ -0.79
COPS3-215ENST00000578317 ALDH1L1O75891 902 aa10.11□□□□□ -0.79
COPS3-215ENST00000578317 SSFA2P28290 1259 aa10.11□□□□□ -0.79
COPS3-215ENST00000578317 EMP3P54852 163 aa10.11□□□□□ -0.79
COPS3-215ENST00000578317 EZH2Q15910 746 aaKnown RBP10.11□□□□□ -0.79
COPS3-215ENST00000578317 TRAPPC3LQ5T215 181 aa10.11□□□□□ -0.79
COPS3-215ENST00000578317 CLEC4GQ6UXB4 293 aa10.11□□□□□ -0.79
COPS3-215ENST00000578317 DZIP3Q86Y13 1208 aaKnown RBP10.11□□□□□ -0.79
COPS3-215ENST00000578317 TTC13Q8NBP0 860 aa10.11□□□□□ -0.79
COPS3-215ENST00000578317 POTEB3A0JP26 581 aa10.1□□□□□ -0.79
COPS3-215ENST00000578317 NEXNQ0ZGT2 675 aa10.1□□□□□ -0.79
COPS3-215ENST00000578317 TCIRG1Q13488 830 aa10.1□□□□□ -0.79
COPS3-215ENST00000578317 HSP90AB3PQ58FF7 597 aa10.1□□□□□ -0.79
COPS3-215ENST00000578317 POTEBQ6S5H4 581 aa10.1□□□□□ -0.79
COPS3-215ENST00000578317 PADI6Q6TGC4 694 aa10.1□□□□□ -0.79
COPS3-215ENST00000578317 SLC4A10Q6U841 1118 aa10.1□□□□□ -0.79
COPS3-215ENST00000578317 KIF6Q6ZMV9 814 aa10.1□□□□□ -0.79
COPS3-215ENST00000578317 DEFB132Q7Z7B7 95 aa10.1□□□□□ -0.79
COPS3-215ENST00000578317 FLAD1Q8NFF5 587 aa10.1□□□□□ -0.79
COPS3-215ENST00000578317 SRCIN1Q9C0H9 1055 aa10.1□□□□□ -0.79
COPS3-215ENST00000578317 COG6Q9Y2V7 657 aa10.1□□□□□ -0.79
COPS3-215ENST00000578317 ATP10DQ9P241 1426 aa10.1□□□□□ -0.79
COPS3-215ENST00000578317 SOCS7O14512 581 aa10.09□□□□□ -0.79
COPS3-215ENST00000578317 CAMTA2O94983 1202 aa10.09□□□□□ -0.79
COPS3-215ENST00000578317 IGKV5-2P06315 115 aa10.09□□□□□ -0.79
COPS3-215ENST00000578317 SSTR3P32745 418 aaPredicted RBP10.09□□□□□ -0.79
COPS3-215ENST00000578317 CRBNQ96SW2 442 aa10.09□□□□□ -0.79
COPS3-215ENST00000578317 PHOX2BQ99453 314 aa10.09□□□□□ -0.79
COPS3-215ENST00000578317 ISCA1Q9BUE6 129 aa10.09□□□□□ -0.79
COPS3-215ENST00000578317 ZBTB40Q9NUA8 1239 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms