RNA–Protein interactions for RNA: ENST00000576957.1

ATP2A3-215, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 1,159 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-215ENST00000576957 FOXN1O15353 648 aa17.17■□□□□ 0.34
ATP2A3-215ENST00000576957 HCLS1P14317 486 aaPredicted RBP17.17■□□□□ 0.34
ATP2A3-215ENST00000576957 GRAPQ13588 217 aa17.17■□□□□ 0.34
ATP2A3-215ENST00000576957 HDGFL1Q5TGJ6 251 aa17.17■□□□□ 0.34
ATP2A3-215ENST00000576957 MPNDQ8N594 471 aa17.17■□□□□ 0.34
ATP2A3-215ENST00000576957 PLBD2Q8NHP8 589 aa17.17■□□□□ 0.34
ATP2A3-215ENST00000576957 GRAPLQ8TC17 118 aaPredicted RBP17.17■□□□□ 0.34
ATP2A3-215ENST00000576957 AIDAQ96BJ3 306 aa17.17■□□□□ 0.34
ATP2A3-215ENST00000576957 LAS1LQ9Y4W2 734 aaKnown RBP17.17■□□□□ 0.34
ATP2A3-215ENST00000576957 LAMB2P55268 1798 aa17.17■□□□□ 0.34
ATP2A3-215ENST00000576957 CTCFP49711 727 aaPredicted RBP17.16■□□□□ 0.34
ATP2A3-215ENST00000576957 KIAA2012Q0VF49 1180 aa17.16■□□□□ 0.34
ATP2A3-215ENST00000576957 KRT24Q2M2I5 525 aa17.16■□□□□ 0.34
ATP2A3-215ENST00000576957 ANKRD13DQ6ZTN6 518 aa17.16■□□□□ 0.34
ATP2A3-215ENST00000576957 ADARB2Q9NS39 739 aaKnown RBP17.16■□□□□ 0.34
ATP2A3-215ENST00000576957 WBP1LQ9NX94 342 aa17.16■□□□□ 0.34
ATP2A3-215ENST00000576957 GPRC5DQ9NZD1 345 aa17.16■□□□□ 0.34
ATP2A3-215ENST00000576957 CHPF2Q9P2E5 772 aa17.16■□□□□ 0.34
ATP2A3-215ENST00000576957 DBF4Q9UBU7 674 aaPredicted RBP17.16■□□□□ 0.34
ATP2A3-215ENST00000576957 CAPN15O75808 1086 aa17.15■□□□□ 0.34
ATP2A3-215ENST00000576957 HNRNPUQ00839 825 aaKnown RBP eCLIP17.15■□□□□ 0.34
ATP2A3-215ENST00000576957 CXCL9Q07325 125 aa17.15■□□□□ 0.34
ATP2A3-215ENST00000576957 CFAP44Q96MT7 982 aa17.15■□□□□ 0.34
ATP2A3-215ENST00000576957 ABT1Q9ULW3 272 aaKnown RBP17.15■□□□□ 0.34
ATP2A3-215ENST00000576957 ADAMTS8Q9UP79 889 aa17.15■□□□□ 0.34
ATP2A3-215ENST00000576957 CDHR2Q9BYE9 1310 aa17.15■□□□□ 0.34
ATP2A3-215ENST00000576957 TNIP1Q15025 636 aa17.14■□□□□ 0.33
ATP2A3-215ENST00000576957 ANP32EQ9BTT0 268 aa17.14■□□□□ 0.33
ATP2A3-215ENST00000576957 ISCA1Q9BUE6 129 aa17.14■□□□□ 0.33
ATP2A3-215ENST00000576957 HYPKQ9NX55 129 aa17.14■□□□□ 0.33
ATP2A3-215ENST00000576957 WDR33Q9C0J8 1336 aaKnown RBP17.14■□□□□ 0.33
ATP2A3-215ENST00000576957 MAP2K1Q02750 393 aaPredicted RBP17.13■□□□□ 0.33
ATP2A3-215ENST00000576957 CIAPIN1Q6FI81 312 aa17.13■□□□□ 0.33
ATP2A3-215ENST00000576957 TRIM28Q13263 835 aaKnown RBP17.12■□□□□ 0.33
ATP2A3-215ENST00000576957 SF3B3Q15393 1217 aaKnown RBP17.12■□□□□ 0.33
ATP2A3-215ENST00000576957 ECE1P42892 770 aa17.11■□□□□ 0.33
ATP2A3-215ENST00000576957 GMPSP49915 693 aaPredicted RBP17.11■□□□□ 0.33
ATP2A3-215ENST00000576957 DUSP27Q5VZP5 1158 aa17.11■□□□□ 0.33
ATP2A3-215ENST00000576957 ZC3H15Q8WU90 426 aaKnown RBP17.11■□□□□ 0.33
ATP2A3-215ENST00000576957 PGAP2Q9UHJ9 254 aa17.11■□□□□ 0.33
ATP2A3-215ENST00000576957 TRPM7Q96QT4 1865 aa17.11■□□□□ 0.33
ATP2A3-215ENST00000576957 LRRC37AA6NMS7 1700 aa17.1■□□□□ 0.33
ATP2A3-215ENST00000576957 DDX60Q8IY21 1712 aaKnown RBP17.1■□□□□ 0.33
ATP2A3-215ENST00000576957 CST9Q5W186 159 aa17.1■□□□□ 0.33
ATP2A3-215ENST00000576957 FAM89AQ96GI7 184 aa17.1■□□□□ 0.33
ATP2A3-215ENST00000576957 BCL2L13Q9BXK5 485 aa17.1■□□□□ 0.33
ATP2A3-215ENST00000576957 PRKRIP1Q9H875 184 aaPredicted RBP17.1■□□□□ 0.33
ATP2A3-215ENST00000576957 MBIPQ9NS73 344 aa17.1■□□□□ 0.33
ATP2A3-215ENST00000576957 TRAF5O00463 557 aa17.09■□□□□ 0.33
ATP2A3-215ENST00000576957 RAD17O75943 681 aa17.09■□□□□ 0.33
ATP2A3-215ENST00000576957 ZNF853P0CG23 659 aa17.09■□□□□ 0.33
ATP2A3-215ENST00000576957 CALD1Q05682 793 aaKnown RBP17.09■□□□□ 0.33
ATP2A3-215ENST00000576957 FMR1Q06787 632 aaKnown RBP eCLIP17.09■□□□□ 0.33
ATP2A3-215ENST00000576957 TLL2Q9Y6L7 1015 aa17.09■□□□□ 0.33
ATP2A3-215ENST00000576957 ZBED9Q6R2W3 1325 aa17.09■□□□□ 0.33
ATP2A3-215ENST00000576957 TAF1P21675 1872 aa17.08■□□□□ 0.33
ATP2A3-215ENST00000576957 DUOX1Q9NRD9 1551 aa17.08■□□□□ 0.32
ATP2A3-215ENST00000576957 ATP5J2-PTCD1G3V325 749 aa17.08■□□□□ 0.32
ATP2A3-215ENST00000576957 HSP90B1P14625 803 aaKnown RBP17.08■□□□□ 0.32
ATP2A3-215ENST00000576957 LBX1P52954 281 aa17.08■□□□□ 0.32
ATP2A3-215ENST00000576957 WASHC4Q2M389 1173 aa17.08■□□□□ 0.32
ATP2A3-215ENST00000576957 CAPNS2Q96L46 248 aa17.08■□□□□ 0.32
ATP2A3-215ENST00000576957 IFT57Q9NWB7 429 aa17.08■□□□□ 0.32
ATP2A3-215ENST00000576957 YDJCA8MPS7 323 aa17.07■□□□□ 0.32
ATP2A3-215ENST00000576957 IRS4O14654 1257 aaPredicted RBP17.07■□□□□ 0.32
ATP2A3-215ENST00000576957 GNAI1P63096 354 aa17.07■□□□□ 0.32
ATP2A3-215ENST00000576957 DPF2Q92785 391 aa17.07■□□□□ 0.32
ATP2A3-215ENST00000576957 CELF1Q92879 486 aaKnown RBP17.07■□□□□ 0.32
ATP2A3-215ENST00000576957 CHMP4AQ9BY43 222 aa17.07■□□□□ 0.32
ATP2A3-215ENST00000576957 CNOT7Q9UIV1 285 aaKnown RBP17.07■□□□□ 0.32
ATP2A3-215ENST00000576957 NSFL1CQ9UNZ2 370 aaKnown RBP17.07■□□□□ 0.32
ATP2A3-215ENST00000576957 THSD7BQ9C0I4 1608 aa17.07■□□□□ 0.32
ATP2A3-215ENST00000576957 H7C1D1 291 aa17.06■□□□□ 0.32
ATP2A3-215ENST00000576957 HSPA8P11142 646 aaKnown RBP17.06■□□□□ 0.32
ATP2A3-215ENST00000576957 GOLGA2Q08379 1002 aa17.06■□□□□ 0.32
ATP2A3-215ENST00000576957 PAXIP1Q6ZW49 1069 aaPredicted RBP17.06■□□□□ 0.32
ATP2A3-215ENST00000576957 CDC37L1Q7L3B6 337 aa17.06■□□□□ 0.32
ATP2A3-215ENST00000576957 RIC3Q7Z5B4 369 aa17.06■□□□□ 0.32
ATP2A3-215ENST00000576957 ZBTB38Q8NAP3 1195 aaPredicted RBP17.06■□□□□ 0.32
ATP2A3-215ENST00000576957 HHIPL1Q96JK4 782 aa17.06■□□□□ 0.32
ATP2A3-215ENST00000576957 GPR101Q96P66 508 aaPredicted RBP17.06■□□□□ 0.32
ATP2A3-215ENST00000576957 EYA3Q99504 573 aa17.06■□□□□ 0.32
ATP2A3-215ENST00000576957 APAF1O14727 1248 aa17.05■□□□□ 0.32
ATP2A3-215ENST00000576957 CELF2O95319 508 aaKnown RBP17.05■□□□□ 0.32
ATP2A3-215ENST00000576957 MAP2K2P36507 400 aa17.05■□□□□ 0.32
ATP2A3-215ENST00000576957 HIRAP54198 1017 aaPredicted RBP17.05■□□□□ 0.32
ATP2A3-215ENST00000576957 RPS8P62241 208 aaKnown RBP17.05■□□□□ 0.32
ATP2A3-215ENST00000576957 CYP4F22Q6NT55 531 aa17.05■□□□□ 0.32
ATP2A3-215ENST00000576957 SAPCD2Q86UD0 394 aa17.05■□□□□ 0.32
ATP2A3-215ENST00000576957 ZNF428Q96B54 188 aa17.05■□□□□ 0.32
ATP2A3-215ENST00000576957 BEGAINQ9BUH8 593 aa17.05■□□□□ 0.32
ATP2A3-215ENST00000576957 C6orf229H3BNL8 230 aa17.04■□□□□ 0.32
ATP2A3-215ENST00000576957 RPS12P25398 132 aaKnown RBP17.04■□□□□ 0.32
ATP2A3-215ENST00000576957 RTL5Q5HYW3 569 aaPredicted RBP17.04■□□□□ 0.32
ATP2A3-215ENST00000576957 CCDC191Q8NCU4 936 aa17.04■□□□□ 0.32
ATP2A3-215ENST00000576957 TRPM4Q8TD43 1214 aa17.04■□□□□ 0.32
ATP2A3-215ENST00000576957 GLIS2Q9BZE0 524 aaPredicted RBP17.04■□□□□ 0.32
ATP2A3-215ENST00000576957 PPP4R2Q9NY27 417 aa17.04■□□□□ 0.32
ATP2A3-215ENST00000576957 POLLQ9UGP5 575 aa17.04■□□□□ 0.32
ATP2A3-215ENST00000576957 PSMD14O00487 310 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms