RNA–Protein interactions for RNA: ENST00000571958.1

PRPF8-203, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 3

Gene PRPF8, Length 380 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-203ENST00000571958 SP8Q8IXZ3 490 aa13.17□□□□□ -0.3
PRPF8-203ENST00000571958 MPNDQ8N594 471 aa13.17□□□□□ -0.3
PRPF8-203ENST00000571958 XAGE3Q8WTP9 111 aa13.17□□□□□ -0.3
PRPF8-203ENST00000571958 ZNF428Q96B54 188 aa13.17□□□□□ -0.3
PRPF8-203ENST00000571958 BEGAINQ9BUH8 593 aa13.17□□□□□ -0.3
PRPF8-203ENST00000571958 GLIS2Q9BZE0 524 aaPredicted RBP13.17□□□□□ -0.3
PRPF8-203ENST00000571958 TSKSQ9UJT2 592 aa13.17□□□□□ -0.3
PRPF8-203ENST00000571958 COL4A1P02462 1669 aa13.16□□□□□ -0.3
PRPF8-203ENST00000571958 BBOX1O75936 387 aa13.16□□□□□ -0.3
PRPF8-203ENST00000571958 RAD17O75943 681 aa13.16□□□□□ -0.3
PRPF8-203ENST00000571958 CELF2O95319 508 aaKnown RBP13.16□□□□□ -0.3
PRPF8-203ENST00000571958 KIAA2012Q0VF49 1180 aa13.16□□□□□ -0.3
PRPF8-203ENST00000571958 CIAPIN1Q6FI81 312 aa13.16□□□□□ -0.3
PRPF8-203ENST00000571958 SAPCD2Q86UD0 394 aa13.16□□□□□ -0.3
PRPF8-203ENST00000571958 TRMT112Q9UI30 125 aaKnown RBP13.16□□□□□ -0.3
PRPF8-203ENST00000571958 CDHR2Q9BYE9 1310 aa13.15□□□□□ -0.3
PRPF8-203ENST00000571958 SHTN1A0MZ66 631 aa13.15□□□□□ -0.3
PRPF8-203ENST00000571958 HIRAP54198 1017 aaPredicted RBP13.15□□□□□ -0.3
PRPF8-203ENST00000571958 KRT24Q2M2I5 525 aa13.15□□□□□ -0.3
PRPF8-203ENST00000571958 HSP90AB3PQ58FF7 597 aa13.15□□□□□ -0.3
PRPF8-203ENST00000571958 DDX46Q7L014 1031 aaKnown RBP13.15□□□□□ -0.3
PRPF8-203ENST00000571958 TRPM4Q8TD43 1214 aa13.15□□□□□ -0.3
PRPF8-203ENST00000571958 BCL2L13Q9BXK5 485 aa13.15□□□□□ -0.3
PRPF8-203ENST00000571958 ZNF408Q9H9D4 720 aa13.15□□□□□ -0.3
PRPF8-203ENST00000571958 BABAM1Q9NWV8 329 aa13.15□□□□□ -0.3
PRPF8-203ENST00000571958 SH3TC1Q8TE82 1336 aa13.14□□□□□ -0.31
PRPF8-203ENST00000571958 YDJCA8MPS7 323 aa13.14□□□□□ -0.31
PRPF8-203ENST00000571958 MAP2K2P36507 400 aa13.14□□□□□ -0.31
PRPF8-203ENST00000571958 TMPOP42166 694 aaKnown RBP13.14□□□□□ -0.31
PRPF8-203ENST00000571958 TCIRG1Q13488 830 aa13.14□□□□□ -0.31
PRPF8-203ENST00000571958 GRAPQ13588 217 aa13.14□□□□□ -0.31
PRPF8-203ENST00000571958 FAM161AQ3B820 660 aa13.14□□□□□ -0.31
PRPF8-203ENST00000571958 GRAPLQ8TC17 118 aaPredicted RBP13.14□□□□□ -0.31
PRPF8-203ENST00000571958 PGAP2Q9UHJ9 254 aa13.14□□□□□ -0.31
PRPF8-203ENST00000571958 CASP8AP2Q9UKL3 1982 aa13.14□□□□□ -0.31
PRPF8-203ENST00000571958 LMOD3Q0VAK6 560 aa13.13□□□□□ -0.31
PRPF8-203ENST00000571958 TNIP1Q15025 636 aa13.13□□□□□ -0.31
PRPF8-203ENST00000571958 CHPF2Q9P2E5 772 aa13.13□□□□□ -0.31
PRPF8-203ENST00000571958 POLR2AP24928 1970 aaKnown RBP13.12□□□□□ -0.31
PRPF8-203ENST00000571958 CCDC85CA6NKD9 419 aa13.12□□□□□ -0.31
PRPF8-203ENST00000571958 DLK2Q6UY11 383 aa13.12□□□□□ -0.31
PRPF8-203ENST00000571958 ZC3H15Q8WU90 426 aaKnown RBP13.12□□□□□ -0.31
PRPF8-203ENST00000571958 HHIPL1Q96JK4 782 aa13.12□□□□□ -0.31
PRPF8-203ENST00000571958 CNOT7Q9UIV1 285 aaKnown RBP13.12□□□□□ -0.31
PRPF8-203ENST00000571958 ZBTB12Q9Y330 459 aaPredicted RBP13.12□□□□□ -0.31
PRPF8-203ENST00000571958 NEUROD2Q15784 382 aa13.11□□□□□ -0.31
PRPF8-203ENST00000571958 CDC37L1Q7L3B6 337 aa13.11□□□□□ -0.31
PRPF8-203ENST00000571958 MICALL2Q8IY33 904 aa13.11□□□□□ -0.31
PRPF8-203ENST00000571958 CCDC146Q8IYE0 955 aa13.11□□□□□ -0.31
PRPF8-203ENST00000571958 SCN9AQ15858 1988 aa13.11□□□□□ -0.31
PRPF8-203ENST00000571958 H7C1D1 291 aa13.1□□□□□ -0.31
PRPF8-203ENST00000571958 CHL1O00533 1208 aa13.1□□□□□ -0.31
PRPF8-203ENST00000571958 BRPF1P55201 1214 aaPredicted RBP13.1□□□□□ -0.31
PRPF8-203ENST00000571958 HDGFL1Q5TGJ6 251 aa13.1□□□□□ -0.31
PRPF8-203ENST00000571958 TMC4Q7Z404 712 aa13.1□□□□□ -0.31
PRPF8-203ENST00000571958 USP48Q86UV5 1035 aa13.1□□□□□ -0.31
PRPF8-203ENST00000571958 CELF1Q92879 486 aaKnown RBP13.1□□□□□ -0.31
PRPF8-203ENST00000571958 FAM89AQ96GI7 184 aa13.1□□□□□ -0.31
PRPF8-203ENST00000571958 DBNDD1Q9H9R9 158 aa13.1□□□□□ -0.31
PRPF8-203ENST00000571958 LAS1LQ9Y4W2 734 aaKnown RBP13.1□□□□□ -0.31
PRPF8-203ENST00000571958 ATP5J2-PTCD1G3V325 749 aa13.09□□□□□ -0.31
PRPF8-203ENST00000571958 PSMD14O00487 310 aa13.09□□□□□ -0.31
PRPF8-203ENST00000571958 RIMBP2O15034 1052 aa13.09□□□□□ -0.31
PRPF8-203ENST00000571958 CA12O43570 354 aa13.09□□□□□ -0.31
PRPF8-203ENST00000571958 EGFRP00533 1210 aa13.09□□□□□ -0.31
PRPF8-203ENST00000571958 RALBP1Q15311 655 aa13.09□□□□□ -0.31
PRPF8-203ENST00000571958 WASHC4Q2M389 1173 aa13.09□□□□□ -0.31
PRPF8-203ENST00000571958 RTL5Q5HYW3 569 aaPredicted RBP13.09□□□□□ -0.31
PRPF8-203ENST00000571958 SAMD7Q7Z3H4 446 aa13.09□□□□□ -0.31
PRPF8-203ENST00000571958 PLBD2Q8NHP8 589 aa13.09□□□□□ -0.31
PRPF8-203ENST00000571958 ZIC5Q96T25 663 aa13.09□□□□□ -0.31
PRPF8-203ENST00000571958 ISCA1Q9BUE6 129 aa13.09□□□□□ -0.31
PRPF8-203ENST00000571958 NSFL1CQ9UNZ2 370 aaKnown RBP13.09□□□□□ -0.31
PRPF8-203ENST00000571958 TRIM35Q9UPQ4 493 aa13.09□□□□□ -0.31
PRPF8-203ENST00000571958 C6orf229H3BNL8 230 aa13.08□□□□□ -0.32
PRPF8-203ENST00000571958 HUNKP57058 714 aa13.08□□□□□ -0.32
PRPF8-203ENST00000571958 GPSM2P81274 684 aa13.08□□□□□ -0.32
PRPF8-203ENST00000571958 SF3B3Q15393 1217 aaKnown RBP13.08□□□□□ -0.32
PRPF8-203ENST00000571958 TBC1D10BQ4KMP7 808 aaPredicted RBP13.08□□□□□ -0.32
PRPF8-203ENST00000571958 ANKRD13DQ6ZTN6 518 aa13.08□□□□□ -0.32
PRPF8-203ENST00000571958 DPF2Q92785 391 aa13.08□□□□□ -0.32
PRPF8-203ENST00000571958 MCOLN1Q9GZU1 580 aa13.08□□□□□ -0.32
PRPF8-203ENST00000571958 KCNQ5Q9NR82 932 aa13.08□□□□□ -0.32
PRPF8-203ENST00000571958 POLLQ9UGP5 575 aa13.08□□□□□ -0.32
PRPF8-203ENST00000571958 RTL9Q8NET4 1388 aa13.07□□□□□ -0.32
PRPF8-203ENST00000571958 PSME4Q14997 1843 aa13.07□□□□□ -0.32
PRPF8-203ENST00000571958 ECE2O60344 883 aa13.07□□□□□ -0.32
PRPF8-203ENST00000571958 MLLT1Q03111 559 aaPredicted RBP13.07□□□□□ -0.32
PRPF8-203ENST00000571958 NOGQ13253 232 aa13.07□□□□□ -0.32
PRPF8-203ENST00000571958 DOK7Q18PE1 504 aa13.07□□□□□ -0.32
PRPF8-203ENST00000571958 DBF4Q9UBU7 674 aaPredicted RBP13.07□□□□□ -0.32
PRPF8-203ENST00000571958 ADM5C9JUS6 153 aa13.06□□□□□ -0.32
PRPF8-203ENST00000571958 HOXB7P09629 217 aa13.06□□□□□ -0.32
PRPF8-203ENST00000571958 RGS19P49795 217 aa13.06□□□□□ -0.32
PRPF8-203ENST00000571958 RBM26Q5T8P6 1007 aaKnown RBP13.06□□□□□ -0.32
PRPF8-203ENST00000571958 KRT26Q7Z3Y9 468 aa13.06□□□□□ -0.32
PRPF8-203ENST00000571958 RUNDC1Q96C34 613 aa13.06□□□□□ -0.32
PRPF8-203ENST00000571958 CFAP44Q96MT7 982 aa13.06□□□□□ -0.32
PRPF8-203ENST00000571958 AKAP11Q9UKA4 1901 aa13.05□□□□□ -0.32
PRPF8-203ENST00000571958 IRS4O14654 1257 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms