RNA–Protein interactions for RNA: ENST00000569487.1

KLHDC4-225, Transcript of kelch domain containing 4, humanhuman

TSL 2

Gene KLHDC4, Length 2,072 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-225ENST00000569487 TMEM87AQ8NBN3 555 aa22.42■■□□□ 1.18
KLHDC4-225ENST00000569487 MYD88Q99836 296 aa22.42■■□□□ 1.18
KLHDC4-225ENST00000569487 RAD50Q92878 1312 aa22.42■■□□□ 1.18
KLHDC4-225ENST00000569487 ATP5J2-PTCD1G3V325 749 aa22.42■■□□□ 1.18
KLHDC4-225ENST00000569487 NBPF7P0C2Y1 421 aaPredicted RBP22.42■■□□□ 1.18
KLHDC4-225ENST00000569487 LINC00116Q8NCU8 138 aa22.42■■□□□ 1.18
KLHDC4-225ENST00000569487 PI4K2BQ8TCG2 481 aa22.42■■□□□ 1.18
KLHDC4-225ENST00000569487 UPF3BQ9BZI7 483 aaKnown RBP22.42■■□□□ 1.18
KLHDC4-225ENST00000569487 NHSQ6T4R5 1651 aa22.41■■□□□ 1.18
KLHDC4-225ENST00000569487 IL25Q9H293 177 aa22.41■■□□□ 1.18
KLHDC4-225ENST00000569487 IL1RAPL2Q9NP60 686 aa22.41■■□□□ 1.18
KLHDC4-225ENST00000569487 SGSM2O43147 1006 aa22.4■■□□□ 1.18
KLHDC4-225ENST00000569487 CRKLP46109 303 aaKnown RBP22.4■■□□□ 1.18
KLHDC4-225ENST00000569487 CSPP1Q1MSJ5 1256 aa22.4■■□□□ 1.18
KLHDC4-225ENST00000569487 NOL8Q76FK4 1167 aaKnown RBP22.4■■□□□ 1.18
KLHDC4-225ENST00000569487 PPP1R42Q7Z4L9 355 aa22.4■■□□□ 1.18
KLHDC4-225ENST00000569487 NUTM1Q86Y26 1132 aa22.4■■□□□ 1.18
KLHDC4-225ENST00000569487 RHPN1Q8TCX5 695 aa22.4■■□□□ 1.18
KLHDC4-225ENST00000569487 TEX13AQ9BXU3 409 aaPredicted RBP22.4■■□□□ 1.18
KLHDC4-225ENST00000569487 RPAP1Q9BWH6 1393 aaPredicted RBP22.39■■□□□ 1.18
KLHDC4-225ENST00000569487 KIF1BPQ96EK5 621 aa22.39■■□□□ 1.17
KLHDC4-225ENST00000569487 SURF6O75683 361 aaKnown RBP22.38■■□□□ 1.17
KLHDC4-225ENST00000569487 SMARCC1Q92922 1105 aaPredicted RBP22.38■■□□□ 1.17
KLHDC4-225ENST00000569487 USP42Q9H9J4 1324 aaKnown RBP22.38■■□□□ 1.17
KLHDC4-225ENST00000569487 DDX58O95786 925 aaKnown RBP22.38■■□□□ 1.17
KLHDC4-225ENST00000569487 TTC14Q96N46 770 aa22.38■■□□□ 1.17
KLHDC4-225ENST00000569487 TBC1D2BQ9UPU7 963 aa22.38■■□□□ 1.17
KLHDC4-225ENST00000569487 FAM196AQ6ZSG2 479 aa22.37■■□□□ 1.17
KLHDC4-225ENST00000569487 USP48Q86UV5 1035 aa22.37■■□□□ 1.17
KLHDC4-225ENST00000569487 AMIGO3Q86WK7 504 aa22.37■■□□□ 1.17
KLHDC4-225ENST00000569487 METTL22Q9BUU2 404 aaPredicted RBP22.37■■□□□ 1.17
KLHDC4-225ENST00000569487 LSG1Q9H089 658 aaKnown RBP22.37■■□□□ 1.17
KLHDC4-225ENST00000569487 SNX14Q9Y5W7 946 aa22.37■■□□□ 1.17
KLHDC4-225ENST00000569487 HLFQ16534 295 aa22.37■■□□□ 1.17
KLHDC4-225ENST00000569487 UVSSAQ2YD98 709 aa22.37■■□□□ 1.17
KLHDC4-225ENST00000569487 CNTROBQ8N137 903 aa22.37■■□□□ 1.17
KLHDC4-225ENST00000569487 FAM184AQ8NB25 1140 aa22.37■■□□□ 1.17
KLHDC4-225ENST00000569487 BCL11BQ9C0K0 894 aaPredicted RBP22.37■■□□□ 1.17
KLHDC4-225ENST00000569487 HSP90AB4PQ58FF6 505 aa22.36■■□□□ 1.17
KLHDC4-225ENST00000569487 KLHL34Q8N239 644 aa22.36■■□□□ 1.17
KLHDC4-225ENST00000569487 PLBD2Q8NHP8 589 aa22.36■■□□□ 1.17
KLHDC4-225ENST00000569487 PDCL3Q9H2J4 239 aa22.36■■□□□ 1.17
KLHDC4-225ENST00000569487 LRRC4BQ9NT99 713 aa22.36■■□□□ 1.17
KLHDC4-225ENST00000569487 ARFGEF2Q9Y6D5 1785 aa22.36■■□□□ 1.17
KLHDC4-225ENST00000569487 GADD45BO75293 160 aaPredicted RBP22.35■■□□□ 1.17
KLHDC4-225ENST00000569487 RNF214Q8ND24 703 aa22.35■■□□□ 1.17
KLHDC4-225ENST00000569487 CCDC87Q9NVE4 849 aa22.35■■□□□ 1.17
KLHDC4-225ENST00000569487 NEURL1BA8MQ27 555 aa22.35■■□□□ 1.17
KLHDC4-225ENST00000569487 TCHHQ07283 1943 aa22.35■■□□□ 1.17
KLHDC4-225ENST00000569487 ILDR1Q86SU0 546 aaPredicted RBP22.34■■□□□ 1.17
KLHDC4-225ENST00000569487 LINS1Q8NG48 757 aa22.34■■□□□ 1.17
KLHDC4-225ENST00000569487 CCNL1Q9UK58 526 aaPredicted RBP22.34■■□□□ 1.17
KLHDC4-225ENST00000569487 TTC41PQ6P2S7 1318 aa22.34■■□□□ 1.17
KLHDC4-225ENST00000569487 SRGAP3O43295 1099 aa22.34■■□□□ 1.17
KLHDC4-225ENST00000569487 R3HCC1Q9Y3T6 440 aaKnown RBP22.34■■□□□ 1.17
KLHDC4-225ENST00000569487 ZSCAN22P10073 491 aaPredicted RBP22.33■■□□□ 1.17
KLHDC4-225ENST00000569487 LIMCH1Q9UPQ0 1083 aa22.33■■□□□ 1.17
KLHDC4-225ENST00000569487 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.33■■□□□ 1.17
KLHDC4-225ENST00000569487 LETM1O95202 739 aaPredicted RBP22.32■■□□□ 1.16
KLHDC4-225ENST00000569487 EIF5P55010 431 aaKnown RBP22.32■■□□□ 1.16
KLHDC4-225ENST00000569487 CCDC183Q5T5S1 534 aa22.32■■□□□ 1.16
KLHDC4-225ENST00000569487 NUP188Q5SRE5 1749 aa22.32■■□□□ 1.16
KLHDC4-225ENST00000569487 GDPD2Q9HCC8 539 aa22.32■■□□□ 1.16
KLHDC4-225ENST00000569487 MAP4K4O95819 1239 aaPredicted RBP22.31■■□□□ 1.16
KLHDC4-225ENST00000569487 AK2P54819 239 aa22.31■■□□□ 1.16
KLHDC4-225ENST00000569487 KAZALD1Q96I82 304 aa22.31■■□□□ 1.16
KLHDC4-225ENST00000569487 GCKRQ14397 625 aa22.3■■□□□ 1.16
KLHDC4-225ENST00000569487 C9orf78Q9NZ63 289 aaPredicted RBP22.3■■□□□ 1.16
KLHDC4-225ENST00000569487 COL5A3P25940 1745 aaPredicted RBP22.3■■□□□ 1.16
KLHDC4-225ENST00000569487 GLRX3O76003 335 aaKnown RBP22.3■■□□□ 1.16
KLHDC4-225ENST00000569487 IL6STP40189 918 aaPredicted RBP22.3■■□□□ 1.16
KLHDC4-225ENST00000569487 MTX1Q13505 466 aa22.3■■□□□ 1.16
KLHDC4-225ENST00000569487 RUFY3Q7L099 469 aa22.3■■□□□ 1.16
KLHDC4-225ENST00000569487 RASEFQ8IZ41 740 aa22.3■■□□□ 1.16
KLHDC4-225ENST00000569487 PROM2Q8N271 834 aa22.3■■□□□ 1.16
KLHDC4-225ENST00000569487 STX6O43752 255 aa22.29■■□□□ 1.16
KLHDC4-225ENST00000569487 ALDH1L1O75891 902 aa22.29■■□□□ 1.16
KLHDC4-225ENST00000569487 GPTP24298 496 aa22.29■■□□□ 1.16
KLHDC4-225ENST00000569487 DZIP3Q86Y13 1208 aaKnown RBP22.29■■□□□ 1.16
KLHDC4-225ENST00000569487 SUCLG2Q96I99 432 aa22.29■■□□□ 1.16
KLHDC4-225ENST00000569487 UBE2HP62256 183 aa22.29■■□□□ 1.16
KLHDC4-225ENST00000569487 NEXNQ0ZGT2 675 aa22.29■■□□□ 1.16
KLHDC4-225ENST00000569487 ATP6V1DQ9Y5K8 247 aa22.29■■□□□ 1.16
KLHDC4-225ENST00000569487 GRM8O00222 908 aa22.28■■□□□ 1.16
KLHDC4-225ENST00000569487 SYT1P21579 422 aa22.28■■□□□ 1.16
KLHDC4-225ENST00000569487 EPHA10Q5JZY3 1008 aa22.28■■□□□ 1.16
KLHDC4-225ENST00000569487 SYNE4Q8N205 404 aa22.28■■□□□ 1.16
KLHDC4-225ENST00000569487 RUFY2Q8WXA3 655 aa22.28■■□□□ 1.16
KLHDC4-225ENST00000569487 KCNB2Q92953 911 aa22.28■■□□□ 1.16
KLHDC4-225ENST00000569487 MAP3K15Q6ZN16 1313 aa22.28■■□□□ 1.16
KLHDC4-225ENST00000569487 LY75O60449 1722 aa22.28■■□□□ 1.16
KLHDC4-225ENST00000569487 AFDNP55196 1824 aaKnown RBP22.28■■□□□ 1.16
KLHDC4-225ENST00000569487 F13A1P00488 732 aa22.27■■□□□ 1.16
KLHDC4-225ENST00000569487 PTMAP06454 111 aaKnown RBP22.27■■□□□ 1.16
KLHDC4-225ENST00000569487 FOXD4L6Q3SYB3 417 aaPredicted RBP22.27■■□□□ 1.16
KLHDC4-225ENST00000569487 FOXD4L3Q6VB84 417 aaPredicted RBP22.27■■□□□ 1.16
KLHDC4-225ENST00000569487 KIF6Q6ZMV9 814 aa22.27■■□□□ 1.16
KLHDC4-225ENST00000569487 MAP7D2Q96T17 732 aa22.27■■□□□ 1.16
KLHDC4-225ENST00000569487 SMC3Q9UQE7 1217 aa22.27■■□□□ 1.16
KLHDC4-225ENST00000569487 CNPY2Q9Y2B0 182 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms