RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 ALDH1A1P00352 501 aa9.21□□□□□ -0.94
HERPUD1-217ENST00000569429 HOXA10P31260 410 aaPredicted RBP9.21□□□□□ -0.94
HERPUD1-217ENST00000569429 FAM122AQ96E09 287 aa9.21□□□□□ -0.94
HERPUD1-217ENST00000569429 CDCA5Q96FF9 252 aa9.21□□□□□ -0.94
HERPUD1-217ENST00000569429 ERO1AQ96HE7 468 aa9.21□□□□□ -0.94
HERPUD1-217ENST00000569429 TEX13AQ9BXU3 409 aaPredicted RBP9.21□□□□□ -0.94
HERPUD1-217ENST00000569429 MTMR10Q9NXD2 777 aa9.21□□□□□ -0.94
HERPUD1-217ENST00000569429 POLKQ9UBT6 870 aa9.21□□□□□ -0.94
HERPUD1-217ENST00000569429 ZNF330Q9Y3S2 320 aaPredicted RBP9.21□□□□□ -0.94
HERPUD1-217ENST00000569429 KIF7Q2M1P5 1343 aa9.21□□□□□ -0.94
HERPUD1-217ENST00000569429 ZNF609O15014 1411 aa9.21□□□□□ -0.94
HERPUD1-217ENST00000569429 RGL2O15211 777 aa9.2□□□□□ -0.94
HERPUD1-217ENST00000569429 RAD17O75943 681 aa9.2□□□□□ -0.94
HERPUD1-217ENST00000569429 SLC4A8Q2Y0W8 1093 aa9.2□□□□□ -0.94
HERPUD1-217ENST00000569429 NPM2Q86SE8 214 aaKnown RBP9.2□□□□□ -0.94
HERPUD1-217ENST00000569429 NBPF11Q86T75 865 aa9.2□□□□□ -0.94
HERPUD1-217ENST00000569429 DZIP3Q86Y13 1208 aaKnown RBP9.2□□□□□ -0.94
HERPUD1-217ENST00000569429 SULF1Q8IWU6 871 aa9.2□□□□□ -0.94
HERPUD1-217ENST00000569429 SUPT20HQ8NEM7 779 aa9.2□□□□□ -0.94
HERPUD1-217ENST00000569429 CARD11Q9BXL7 1154 aa9.2□□□□□ -0.94
HERPUD1-217ENST00000569429 RTFDC1Q9BY42 306 aaPredicted RBP9.2□□□□□ -0.94
HERPUD1-217ENST00000569429 ZBTB12Q9Y330 459 aaPredicted RBP9.2□□□□□ -0.94
HERPUD1-217ENST00000569429 SLC24A1O60721 1099 aa9.19□□□□□ -0.94
HERPUD1-217ENST00000569429 EGFRP00533 1210 aa9.19□□□□□ -0.94
HERPUD1-217ENST00000569429 TBC1D10BQ4KMP7 808 aaPredicted RBP9.19□□□□□ -0.94
HERPUD1-217ENST00000569429 TESK2Q96S53 571 aa9.19□□□□□ -0.94
HERPUD1-217ENST00000569429 LGR6Q9HBX8 967 aa9.19□□□□□ -0.94
HERPUD1-217ENST00000569429 ZNF652Q9Y2D9 606 aa9.19□□□□□ -0.94
HERPUD1-217ENST00000569429 NR2E3Q9Y5X4 410 aa9.19□□□□□ -0.94
HERPUD1-217ENST00000569429 RIC1Q4ADV7 1423 aa9.19□□□□□ -0.94
HERPUD1-217ENST00000569429 PRAMEF22A3QJZ6 481 aa9.18□□□□□ -0.94
HERPUD1-217ENST00000569429 PPEF1O14829 653 aaPredicted RBP9.18□□□□□ -0.94
HERPUD1-217ENST00000569429 ZBTB7BO15156 539 aaPredicted RBP9.18□□□□□ -0.94
HERPUD1-217ENST00000569429 KIAA2012Q0VF49 1180 aa9.18□□□□□ -0.94
HERPUD1-217ENST00000569429 Q7L0L9 218 aa9.18□□□□□ -0.94
HERPUD1-217ENST00000569429 CRAMP1Q96RY5 1269 aa9.18□□□□□ -0.94
HERPUD1-217ENST00000569429 HTATIP2Q9BUP3 242 aa9.18□□□□□ -0.94
HERPUD1-217ENST00000569429 EFCC1Q9HA90 598 aa9.18□□□□□ -0.94
HERPUD1-217ENST00000569429 RAPGEFL1Q9UHV5 662 aa9.18□□□□□ -0.94
HERPUD1-217ENST00000569429 NIP7Q9Y221 180 aaKnown RBP eCLIP9.18□□□□□ -0.94
HERPUD1-217ENST00000569429 NUP98P52948 1817 aa9.17□□□□□ -0.94
HERPUD1-217ENST00000569429 HEG1Q9ULI3 1381 aa9.17□□□□□ -0.94
HERPUD1-217ENST00000569429 WTIPA6NIX2 430 aaPredicted RBP9.17□□□□□ -0.94
HERPUD1-217ENST00000569429 YDJCA8MPS7 323 aa9.17□□□□□ -0.94
HERPUD1-217ENST00000569429 RNMTO43148 476 aaKnown RBP9.17□□□□□ -0.94
HERPUD1-217ENST00000569429 A1BGP04217 495 aa9.17□□□□□ -0.94
HERPUD1-217ENST00000569429 SLC51AQ86UW1 340 aa9.17□□□□□ -0.94
HERPUD1-217ENST00000569429 RPGRQ92834 1020 aaKnown RBP9.17□□□□□ -0.94
HERPUD1-217ENST00000569429 ZNF496Q96IT1 587 aaPredicted RBP9.17□□□□□ -0.94
HERPUD1-217ENST00000569429 GGA3Q9NZ52 723 aa9.17□□□□□ -0.94
HERPUD1-217ENST00000569429 ALPK3Q96L96 1907 aa9.16□□□□□ -0.94
HERPUD1-217ENST00000569429 UBE2Q2LH0YL09 131 aa9.16□□□□□ -0.94
HERPUD1-217ENST00000569429 GTF2E1P29083 439 aaPredicted RBP9.16□□□□□ -0.94
HERPUD1-217ENST00000569429 SLC9C1Q4G0N8 1177 aa9.16□□□□□ -0.94
HERPUD1-217ENST00000569429 MOB2Q70IA6 237 aa9.16□□□□□ -0.94
HERPUD1-217ENST00000569429 CD99L2Q8TCZ2 262 aa9.16□□□□□ -0.94
HERPUD1-217ENST00000569429 TMX4Q9H1E5 349 aaPredicted RBP9.16□□□□□ -0.94
HERPUD1-217ENST00000569429 ATP6V0A2Q9Y487 856 aa9.16□□□□□ -0.94
HERPUD1-217ENST00000569429 ABCC12Q96J65 1359 aa9.15□□□□□ -0.94
HERPUD1-217ENST00000569429 RPS12P25398 132 aaKnown RBP9.15□□□□□ -0.94
HERPUD1-217ENST00000569429 INHBEP58166 350 aa9.15□□□□□ -0.94
HERPUD1-217ENST00000569429 KIF4BQ2VIQ3 1234 aa9.15□□□□□ -0.94
HERPUD1-217ENST00000569429 LRIT3Q3SXY7 679 aa9.15□□□□□ -0.94
HERPUD1-217ENST00000569429 UBE2Q1Q7Z7E8 422 aa9.15□□□□□ -0.94
HERPUD1-217ENST00000569429 AEBP1Q8IUX7 1158 aa9.15□□□□□ -0.94
HERPUD1-217ENST00000569429 TTC5Q8N0Z6 440 aa9.15□□□□□ -0.94
HERPUD1-217ENST00000569429 RBM17Q96I25 401 aaKnown RBP9.15□□□□□ -0.94
HERPUD1-217ENST00000569429 SIPA1L3O60292 1781 aaPredicted RBP9.14□□□□□ -0.95
HERPUD1-217ENST00000569429 MUC6Q6W4X9 2439 aa9.14□□□□□ -0.95
HERPUD1-217ENST00000569429 SCN9AQ15858 1988 aa9.14□□□□□ -0.95
HERPUD1-217ENST00000569429 FAM177BA6PVY3 158 aa9.14□□□□□ -0.95
HERPUD1-217ENST00000569429 PSMD14O00487 310 aa9.14□□□□□ -0.95
HERPUD1-217ENST00000569429 TCERG1O14776 1098 aaKnown RBP9.14□□□□□ -0.95
HERPUD1-217ENST00000569429 BMP8BP34820 402 aa9.14□□□□□ -0.95
HERPUD1-217ENST00000569429 CAP1Q01518 475 aa9.14□□□□□ -0.95
HERPUD1-217ENST00000569429 MKRN3Q13064 507 aaKnown RBP9.14□□□□□ -0.95
HERPUD1-217ENST00000569429 RBM26Q5T8P6 1007 aaKnown RBP9.14□□□□□ -0.95
HERPUD1-217ENST00000569429 IFNL1Q8IU54 200 aa9.14□□□□□ -0.95
HERPUD1-217ENST00000569429 SHISA4Q96DD7 197 aa9.14□□□□□ -0.95
HERPUD1-217ENST00000569429 SNX27Q96L92 541 aa9.14□□□□□ -0.95
HERPUD1-217ENST00000569429 CARD14Q9BXL6 1004 aa9.14□□□□□ -0.95
HERPUD1-217ENST00000569429 NYXQ9GZU5 481 aa9.14□□□□□ -0.95
HERPUD1-217ENST00000569429 STAP2Q9UGK3 403 aa9.14□□□□□ -0.95
HERPUD1-217ENST00000569429 CDH23Q9H251 3354 aa9.14□□□□□ -0.95
HERPUD1-217ENST00000569429 ASTN2O75129 1339 aaPredicted RBP9.13□□□□□ -0.95
HERPUD1-217ENST00000569429 RPTORQ8N122 1335 aa9.13□□□□□ -0.95
HERPUD1-217ENST00000569429 BDP1A6H8Y1 2624 aa9.13□□□□□ -0.95
HERPUD1-217ENST00000569429 MANSC4A6NHS7 340 aaPredicted RBP9.13□□□□□ -0.95
HERPUD1-217ENST00000569429 SP3Q02447 781 aa9.13□□□□□ -0.95
HERPUD1-217ENST00000569429 SYMPKQ92797 1274 aaKnown RBP9.13□□□□□ -0.95
HERPUD1-217ENST00000569429 PTCH2Q9Y6C5 1203 aa9.13□□□□□ -0.95
HERPUD1-217ENST00000569429 DDX60Q8IY21 1712 aaKnown RBP9.13□□□□□ -0.95
HERPUD1-217ENST00000569429 SYNGAP1Q96PV0 1343 aa9.12□□□□□ -0.95
HERPUD1-217ENST00000569429 TNNT2P45379 298 aaPredicted RBP9.12□□□□□ -0.95
HERPUD1-217ENST00000569429 TCIRG1Q13488 830 aa9.12□□□□□ -0.95
HERPUD1-217ENST00000569429 ARHGEF6Q15052 776 aa9.12□□□□□ -0.95
HERPUD1-217ENST00000569429 SPRYD7Q5W111 196 aa9.12□□□□□ -0.95
HERPUD1-217ENST00000569429 SULT6B1Q6IMI4 303 aa9.12□□□□□ -0.95
HERPUD1-217ENST00000569429 ZNF790Q6PG37 636 aa9.12□□□□□ -0.95
HERPUD1-217ENST00000569429 DPP8Q6V1X1 898 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms