RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 CRISPLD2Q9H0B8 497 aa9.73□□□□□ -0.85
ZEB1-223ENST00000561304 ZNF652Q9Y2D9 606 aa9.73□□□□□ -0.85
ZEB1-223ENST00000561304 MAP3K15Q6ZN16 1313 aa9.73□□□□□ -0.85
ZEB1-223ENST00000561304 C21orf2O43822 256 aa9.72□□□□□ -0.85
ZEB1-223ENST00000561304 SRGNP10124 158 aa9.72□□□□□ -0.85
ZEB1-223ENST00000561304 PDE4AP27815 886 aa9.72□□□□□ -0.85
ZEB1-223ENST00000561304 LMOD3Q0VAK6 560 aa9.72□□□□□ -0.85
ZEB1-223ENST00000561304 PAXIP1Q6ZW49 1069 aaPredicted RBP9.72□□□□□ -0.85
ZEB1-223ENST00000561304 SLC51AQ86UW1 340 aa9.72□□□□□ -0.85
ZEB1-223ENST00000561304 NECTIN2Q92692 538 aa9.72□□□□□ -0.85
ZEB1-223ENST00000561304 ZBTB3Q9H5J0 574 aa9.72□□□□□ -0.85
ZEB1-223ENST00000561304 CHL1O00533 1208 aa9.71□□□□□ -0.86
ZEB1-223ENST00000561304 NPHP1O15259 732 aa9.71□□□□□ -0.86
ZEB1-223ENST00000561304 EIF2S2P20042 333 aaKnown RBP9.71□□□□□ -0.86
ZEB1-223ENST00000561304 STYK1Q6J9G0 422 aa9.71□□□□□ -0.86
ZEB1-223ENST00000561304 PRPF40BQ6NWY9 871 aaKnown RBP9.71□□□□□ -0.86
ZEB1-223ENST00000561304 OLFM4Q6UX06 510 aa9.71□□□□□ -0.86
ZEB1-223ENST00000561304 NUTM1Q86Y26 1132 aa9.71□□□□□ -0.86
ZEB1-223ENST00000561304 PCNTO95613 3336 aa9.71□□□□□ -0.86
ZEB1-223ENST00000561304 SNED1Q8TER0 1413 aa9.71□□□□□ -0.86
ZEB1-223ENST00000561304 COL4A1P02462 1669 aa9.71□□□□□ -0.86
ZEB1-223ENST00000561304 KLRG2A4D1S0 409 aaPredicted RBP9.7□□□□□ -0.86
ZEB1-223ENST00000561304 ERVV-1B6SEH8 477 aa9.7□□□□□ -0.86
ZEB1-223ENST00000561304 LMNB1P20700 586 aa9.7□□□□□ -0.86
ZEB1-223ENST00000561304 GPTP24298 496 aa9.7□□□□□ -0.86
ZEB1-223ENST00000561304 KIF6Q6ZMV9 814 aa9.7□□□□□ -0.86
ZEB1-223ENST00000561304 MASTLQ96GX5 879 aa9.7□□□□□ -0.86
ZEB1-223ENST00000561304 CFAP44Q96MT7 982 aa9.7□□□□□ -0.86
ZEB1-223ENST00000561304 BABAM1Q9NWV8 329 aa9.7□□□□□ -0.86
ZEB1-223ENST00000561304 PDZRN3Q9UPQ7 1066 aa9.7□□□□□ -0.86
ZEB1-223ENST00000561304 LAS1LQ9Y4W2 734 aaKnown RBP9.7□□□□□ -0.86
ZEB1-223ENST00000561304 ERBB4Q15303 1308 aa9.7□□□□□ -0.86
ZEB1-223ENST00000561304 IBTKQ9P2D0 1353 aaPredicted RBP9.7□□□□□ -0.86
ZEB1-223ENST00000561304 RIC1Q4ADV7 1423 aa9.7□□□□□ -0.86
ZEB1-223ENST00000561304 COL4A5P29400 1685 aa9.7□□□□□ -0.86
ZEB1-223ENST00000561304 SCN4AP35499 1836 aa9.69□□□□□ -0.86
ZEB1-223ENST00000561304 LRRC37AA6NMS7 1700 aa9.69□□□□□ -0.86
ZEB1-223ENST00000561304 SLC34A2O95436 690 aa9.69□□□□□ -0.86
ZEB1-223ENST00000561304 ERFEQ4G0M1 354 aa9.69□□□□□ -0.86
ZEB1-223ENST00000561304 SUSD4Q5VX71 490 aa9.69□□□□□ -0.86
ZEB1-223ENST00000561304 ZNF34Q8IZ26 560 aa9.69□□□□□ -0.86
ZEB1-223ENST00000561304 C7orf43Q8WVR3 580 aa9.69□□□□□ -0.86
ZEB1-223ENST00000561304 CNKSR1Q969H4 720 aa9.69□□□□□ -0.86
ZEB1-223ENST00000561304 SPEF2Q9C093 1822 aa9.68□□□□□ -0.86
ZEB1-223ENST00000561304 APAF1O14727 1248 aa9.68□□□□□ -0.86
ZEB1-223ENST00000561304 NTSR2O95665 410 aa9.68□□□□□ -0.86
ZEB1-223ENST00000561304 TPTE2Q6XPS3 522 aa9.68□□□□□ -0.86
ZEB1-223ENST00000561304 GIGYF2Q6Y7W6 1299 aaKnown RBP9.68□□□□□ -0.86
ZEB1-223ENST00000561304 MBIPQ9NS73 344 aa9.68□□□□□ -0.86
ZEB1-223ENST00000561304 MYH3P11055 1940 aa9.68□□□□□ -0.86
ZEB1-223ENST00000561304 LTBP3Q9NS15 1303 aa9.67□□□□□ -0.86
ZEB1-223ENST00000561304 ZC3H4Q9UPT8 1303 aaKnown RBP9.67□□□□□ -0.86
ZEB1-223ENST00000561304 ZNF853P0CG23 659 aa9.67□□□□□ -0.86
ZEB1-223ENST00000561304 HOXB1P14653 301 aaPredicted RBP9.67□□□□□ -0.86
ZEB1-223ENST00000561304 NPR1P16066 1061 aa9.67□□□□□ -0.86
ZEB1-223ENST00000561304 HSPA6P17066 643 aa9.67□□□□□ -0.86
ZEB1-223ENST00000561304 DSG2Q14126 1118 aa9.67□□□□□ -0.86
ZEB1-223ENST00000561304 CRY2Q49AN0 593 aa9.67□□□□□ -0.86
ZEB1-223ENST00000561304 XAGE3Q8WTP9 111 aa9.67□□□□□ -0.86
ZEB1-223ENST00000561304 ZNF428Q96B54 188 aa9.67□□□□□ -0.86
ZEB1-223ENST00000561304 TAOK3Q9H2K8 898 aa9.67□□□□□ -0.86
ZEB1-223ENST00000561304 RRAGCQ9HB90 399 aa9.67□□□□□ -0.86
ZEB1-223ENST00000561304 CHPF2Q9P2E5 772 aa9.67□□□□□ -0.86
ZEB1-223ENST00000561304 LTBP1Q14766 1721 aa9.67□□□□□ -0.86
ZEB1-223ENST00000561304 CACNA1FO60840 1977 aa9.67□□□□□ -0.86
ZEB1-223ENST00000561304 ADAMTSL1Q8N6G6 1762 aa9.66□□□□□ -0.86
ZEB1-223ENST00000561304 KDM2BQ8NHM5 1336 aa9.66□□□□□ -0.86
ZEB1-223ENST00000561304 POTECB2RU33 542 aa9.66□□□□□ -0.86
ZEB1-223ENST00000561304 TOMM70O94826 608 aa9.66□□□□□ -0.86
ZEB1-223ENST00000561304 AIMP1Q12904 312 aaKnown RBP9.66□□□□□ -0.86
ZEB1-223ENST00000561304 COPS6Q7L5N1 327 aa9.66□□□□□ -0.86
ZEB1-223ENST00000561304 PLPP6Q8IY26 295 aa9.66□□□□□ -0.86
ZEB1-223ENST00000561304 NYXQ9GZU5 481 aa9.66□□□□□ -0.86
ZEB1-223ENST00000561304 GLTPD2A6NH11 291 aa9.65□□□□□ -0.86
ZEB1-223ENST00000561304 GTF2E1P29083 439 aaPredicted RBP9.65□□□□□ -0.86
ZEB1-223ENST00000561304 ZEB1P37275 1124 aaPredicted RBP9.65□□□□□ -0.86
ZEB1-223ENST00000561304 HDGFL1Q5TGJ6 251 aa9.65□□□□□ -0.86
ZEB1-223ENST00000561304 SYNE4Q8N205 404 aa9.65□□□□□ -0.86
ZEB1-223ENST00000561304 MARVELD3Q96A59 401 aa9.65□□□□□ -0.86
ZEB1-223ENST00000561304 DDX21Q9NR30 783 aaKnown RBP eCLIP9.65□□□□□ -0.86
ZEB1-223ENST00000561304 DUOX1Q9NRD9 1551 aa9.65□□□□□ -0.87
ZEB1-223ENST00000561304 ZNF316A6NFI3 1004 aaPredicted RBP9.64□□□□□ -0.87
ZEB1-223ENST00000561304 MFSD10Q14728 455 aa9.64□□□□□ -0.87
ZEB1-223ENST00000561304 CCDC93Q567U6 631 aa9.64□□□□□ -0.87
ZEB1-223ENST00000561304 PPP1R15BQ5SWA1 713 aa9.64□□□□□ -0.87
ZEB1-223ENST00000561304 DUSP27Q5VZP5 1158 aa9.64□□□□□ -0.87
ZEB1-223ENST00000561304 GPR153Q6NV75 609 aa9.64□□□□□ -0.87
ZEB1-223ENST00000561304 RBM46Q8TBY0 533 aaKnown RBP9.64□□□□□ -0.87
ZEB1-223ENST00000561304 ZNF277Q9NRM2 450 aaPredicted RBP9.64□□□□□ -0.87
ZEB1-223ENST00000561304 ZNF541Q9H0D2 1346 aa9.64□□□□□ -0.87
ZEB1-223ENST00000561304 HOXB7P09629 217 aa9.63□□□□□ -0.87
ZEB1-223ENST00000561304 HOXA10P31260 410 aaPredicted RBP9.63□□□□□ -0.87
ZEB1-223ENST00000561304 HTRA3P83110 453 aa9.63□□□□□ -0.87
ZEB1-223ENST00000561304 FKBP4Q02790 459 aaKnown RBP eCLIP9.63□□□□□ -0.87
ZEB1-223ENST00000561304 SOGA3Q5TF21 947 aa9.63□□□□□ -0.87
ZEB1-223ENST00000561304 NLRP10Q86W26 655 aa9.63□□□□□ -0.87
ZEB1-223ENST00000561304 DDX27Q96GQ7 796 aaKnown RBP9.63□□□□□ -0.87
ZEB1-223ENST00000561304 LARP6Q9BRS8 491 aaKnown RBP9.63□□□□□ -0.87
ZEB1-223ENST00000561304 IFT57Q9NWB7 429 aa9.63□□□□□ -0.87
ZEB1-223ENST00000561304 ELL2O00472 640 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms