RNA–Protein interactions for RNA: ENST00000560046.1

DCAF11-227, Transcript of DDB1 and CUL4 associated factor 11, humanhuman

TSL 3

Gene DCAF11, Length 686 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF11-227ENST00000560046 TCIRG1Q13488 830 aa12.88□□□□□ -0.35
DCAF11-227ENST00000560046 GPR162Q16538 588 aa12.88□□□□□ -0.35
DCAF11-227ENST00000560046 JARID2Q92833 1246 aaPredicted RBP12.88□□□□□ -0.35
DCAF11-227ENST00000560046 KCNB2Q92953 911 aa12.88□□□□□ -0.35
DCAF11-227ENST00000560046 PDGFDQ9GZP0 370 aaPredicted RBP12.88□□□□□ -0.35
DCAF11-227ENST00000560046 CCDC8Q9H0W5 538 aaPredicted RBP12.88□□□□□ -0.35
DCAF11-227ENST00000560046 GPR108Q9NPR9 543 aa12.88□□□□□ -0.35
DCAF11-227ENST00000560046 PCDH10Q9P2E7 1040 aa12.88□□□□□ -0.35
DCAF11-227ENST00000560046 ATF5Q9Y2D1 282 aaPredicted RBP12.88□□□□□ -0.35
DCAF11-227ENST00000560046 THRAP3Q9Y2W1 955 aaKnown RBP12.88□□□□□ -0.35
DCAF11-227ENST00000560046 RFX7Q2KHR2 1363 aa12.88□□□□□ -0.35
DCAF11-227ENST00000560046 STARD3NLO95772 234 aa12.87□□□□□ -0.35
DCAF11-227ENST00000560046 HSP90AA1P07900 732 aaKnown RBP12.87□□□□□ -0.35
DCAF11-227ENST00000560046 ATP5JP18859 108 aa12.87□□□□□ -0.35
DCAF11-227ENST00000560046 CUL4AQ13619 759 aa12.87□□□□□ -0.35
DCAF11-227ENST00000560046 TNNI3KQ59H18 835 aa12.87□□□□□ -0.35
DCAF11-227ENST00000560046 LMBR1LQ6UX01 489 aa12.87□□□□□ -0.35
DCAF11-227ENST00000560046 KLHDC4Q8TBB5 520 aa12.87□□□□□ -0.35
DCAF11-227ENST00000560046 TNPO1Q92973 898 aaKnown RBP12.87□□□□□ -0.35
DCAF11-227ENST00000560046 SIL1Q9H173 461 aa12.87□□□□□ -0.35
DCAF11-227ENST00000560046 DIAPH3Q9NSV4 1193 aa12.87□□□□□ -0.35
DCAF11-227ENST00000560046 TLR7Q9NYK1 1049 aaKnown RBP12.87□□□□□ -0.35
DCAF11-227ENST00000560046 FPGT-TNNI3KV9GXZ4 949 aa12.87□□□□□ -0.35
DCAF11-227ENST00000560046 SPEF2Q9C093 1822 aa12.87□□□□□ -0.35
DCAF11-227ENST00000560046 SPATA31A1Q5TZJ5 1347 aa12.87□□□□□ -0.35
DCAF11-227ENST00000560046 DDX11L8A8MPP1 907 aa12.86□□□□□ -0.35
DCAF11-227ENST00000560046 CYP2E1P05181 493 aaPredicted RBP12.86□□□□□ -0.35
DCAF11-227ENST00000560046 NEK4P51957 841 aa12.86□□□□□ -0.35
DCAF11-227ENST00000560046 TFCP2Q12800 502 aa12.86□□□□□ -0.35
DCAF11-227ENST00000560046 PLA2G12BQ9BX93 195 aa12.86□□□□□ -0.35
DCAF11-227ENST00000560046 ZBTB3Q9H5J0 574 aa12.86□□□□□ -0.35
DCAF11-227ENST00000560046 ZNF831Q5JPB2 1677 aa12.86□□□□□ -0.35
DCAF11-227ENST00000560046 CIAO1O76071 339 aa12.85□□□□□ -0.35
DCAF11-227ENST00000560046 PCCAP05165 728 aaPredicted RBP12.85□□□□□ -0.35
DCAF11-227ENST00000560046 CYP19A1P11511 503 aaPredicted RBP12.85□□□□□ -0.35
DCAF11-227ENST00000560046 PTMSP20962 102 aa12.85□□□□□ -0.35
DCAF11-227ENST00000560046 NUCB2P80303 420 aa12.85□□□□□ -0.35
DCAF11-227ENST00000560046 KIAA1211Q6ZU35 1233 aa12.85□□□□□ -0.35
DCAF11-227ENST00000560046 ATG9AQ7Z3C6 839 aa12.85□□□□□ -0.35
DCAF11-227ENST00000560046 TICAM2Q86XR7 235 aa12.85□□□□□ -0.35
DCAF11-227ENST00000560046 SLC4A9Q96Q91 983 aa12.85□□□□□ -0.35
DCAF11-227ENST00000560046 SGIP1Q9BQI5 828 aa12.85□□□□□ -0.35
DCAF11-227ENST00000560046 FBXO3Q9UK99 471 aa12.85□□□□□ -0.35
DCAF11-227ENST00000560046 SNX14Q9Y5W7 946 aa12.85□□□□□ -0.35
DCAF11-227ENST00000560046 MAP3K15Q6ZN16 1313 aa12.85□□□□□ -0.35
DCAF11-227ENST00000560046 CWC27Q6UX04 472 aaKnown RBP12.84□□□□□ -0.35
DCAF11-227ENST00000560046 GIGYF2Q6Y7W6 1299 aaKnown RBP12.84□□□□□ -0.35
DCAF11-227ENST00000560046 KIF6Q6ZMV9 814 aa12.84□□□□□ -0.35
DCAF11-227ENST00000560046 TMX3Q96JJ7 454 aa12.84□□□□□ -0.35
DCAF11-227ENST00000560046 GBP4Q96PP9 640 aa12.84□□□□□ -0.35
DCAF11-227ENST00000560046 MTFR1LQ9H019 292 aa12.84□□□□□ -0.35
DCAF11-227ENST00000560046 FOXD4L1Q9NU39 408 aa12.84□□□□□ -0.35
DCAF11-227ENST00000560046 DBNLQ9UJU6 430 aaKnown RBP12.84□□□□□ -0.35
DCAF11-227ENST00000560046 CDHR2Q9BYE9 1310 aa12.84□□□□□ -0.35
DCAF11-227ENST00000560046 MED23Q9ULK4 1368 aa12.83□□□□□ -0.36
DCAF11-227ENST00000560046 ZNF609O15014 1411 aa12.83□□□□□ -0.36
DCAF11-227ENST00000560046 PLSCR1O15162 318 aa12.83□□□□□ -0.36
DCAF11-227ENST00000560046 IL15P40933 162 aaPredicted RBP12.83□□□□□ -0.36
DCAF11-227ENST00000560046 HSP90AB3PQ58FF7 597 aa12.83□□□□□ -0.36
DCAF11-227ENST00000560046 COL13A1Q5TAT6 717 aaPredicted RBP12.83□□□□□ -0.36
DCAF11-227ENST00000560046 INTS4Q96HW7 963 aaKnown RBP12.83□□□□□ -0.36
DCAF11-227ENST00000560046 TM6SF1Q9BZW5 370 aa12.83□□□□□ -0.36
DCAF11-227ENST00000560046 CCDC171Q6TFL3 1326 aa12.83□□□□□ -0.36
DCAF11-227ENST00000560046 EYA2O00167 538 aa12.82□□□□□ -0.36
DCAF11-227ENST00000560046 CSF1RP07333 972 aa12.82□□□□□ -0.36
DCAF11-227ENST00000560046 SSFA2P28290 1259 aa12.82□□□□□ -0.36
DCAF11-227ENST00000560046 PTH1RQ03431 593 aa12.82□□□□□ -0.36
DCAF11-227ENST00000560046 NMIQ13287 307 aaPredicted RBP12.82□□□□□ -0.36
DCAF11-227ENST00000560046 BARGINQ6ZT62 677 aa12.82□□□□□ -0.36
DCAF11-227ENST00000560046 TTC14Q96N46 770 aa12.82□□□□□ -0.36
DCAF11-227ENST00000560046 ARXQ96QS3 562 aa12.82□□□□□ -0.36
DCAF11-227ENST00000560046 BOLA2Q9H3K6 86 aa12.82□□□□□ -0.36
DCAF11-227ENST00000560046 COL5A3P25940 1745 aaPredicted RBP12.82□□□□□ -0.36
DCAF11-227ENST00000560046 MYH14Q7Z406 1995 aaKnown RBP12.81□□□□□ -0.36
DCAF11-227ENST00000560046 ERVV-1B6SEH8 477 aa12.81□□□□□ -0.36
DCAF11-227ENST00000560046 IL6STP40189 918 aaPredicted RBP12.81□□□□□ -0.36
DCAF11-227ENST00000560046 NECTIN1Q15223 517 aa12.81□□□□□ -0.36
DCAF11-227ENST00000560046 RASEFQ8IZ41 740 aa12.81□□□□□ -0.36
DCAF11-227ENST00000560046 ZBTB38Q8NAP3 1195 aaPredicted RBP12.81□□□□□ -0.36
DCAF11-227ENST00000560046 MAP4K1Q92918 833 aa12.81□□□□□ -0.36
DCAF11-227ENST00000560046 HAUS7Q99871 368 aa12.81□□□□□ -0.36
DCAF11-227ENST00000560046 DBNDD2Q9BQY9 259 aa12.81□□□□□ -0.36
DCAF11-227ENST00000560046 BCL11BQ9C0K0 894 aaPredicted RBP12.81□□□□□ -0.36
DCAF11-227ENST00000560046 MYH7P12883 1935 aa12.81□□□□□ -0.36
DCAF11-227ENST00000560046 LAMB2P55268 1798 aa12.81□□□□□ -0.36
DCAF11-227ENST00000560046 TRAK2O60296 914 aa12.8□□□□□ -0.36
DCAF11-227ENST00000560046 PRIM1P49642 420 aaKnown RBP12.8□□□□□ -0.36
DCAF11-227ENST00000560046 DDB1Q16531 1140 aa12.8□□□□□ -0.36
DCAF11-227ENST00000560046 TNS4Q8IZW8 715 aa12.8□□□□□ -0.36
DCAF11-227ENST00000560046 ZGPATQ8N5A5 531 aaKnown RBP12.8□□□□□ -0.36
DCAF11-227ENST00000560046 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.8□□□□□ -0.36
DCAF11-227ENST00000560046 FSD1Q9BTV5 496 aa12.8□□□□□ -0.36
DCAF11-227ENST00000560046 GPBP1L1Q9HC44 474 aaPredicted RBP12.8□□□□□ -0.36
DCAF11-227ENST00000560046 PALLDQ8WX93 1383 aa12.8□□□□□ -0.36
DCAF11-227ENST00000560046 BCORQ6W2J9 1755 aa12.79□□□□□ -0.36
DCAF11-227ENST00000560046 A0A0D9SFI3 127 aa12.79□□□□□ -0.36
DCAF11-227ENST00000560046 BAG4O95429 457 aaKnown RBP12.79□□□□□ -0.36
DCAF11-227ENST00000560046 SKOR2Q2VWA4 1001 aaPredicted RBP12.79□□□□□ -0.36
DCAF11-227ENST00000560046 NLRP10Q86W26 655 aa12.79□□□□□ -0.36
DCAF11-227ENST00000560046 MARCH10Q8NA82 808 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms