RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 SP8Q8IXZ3 490 aa20.24■□□□□ 0.83
SUPT16H-205ENST00000556217 TNRC18O15417 2968 aaPredicted RBP20.24■□□□□ 0.83
SUPT16H-205ENST00000556217 TRAF5O00463 557 aa20.23■□□□□ 0.83
SUPT16H-205ENST00000556217 ANXA1P04083 346 aa20.23■□□□□ 0.83
SUPT16H-205ENST00000556217 FMR1Q06787 632 aaKnown RBP eCLIP20.23■□□□□ 0.833e-8■■■■■ 41
SUPT16H-205ENST00000556217 CXCL9Q07325 125 aa20.23■□□□□ 0.83
SUPT16H-205ENST00000556217 PROSER3Q2NL68 480 aa20.23■□□□□ 0.83
SUPT16H-205ENST00000556217 DDX46Q7L014 1031 aaKnown RBP20.23■□□□□ 0.83
SUPT16H-205ENST00000556217 COPS6Q7L5N1 327 aa20.23■□□□□ 0.83
SUPT16H-205ENST00000556217 MPNDQ8N594 471 aa20.23■□□□□ 0.83
SUPT16H-205ENST00000556217 CDHR2Q9BYE9 1310 aa20.23■□□□□ 0.83
SUPT16H-205ENST00000556217 CASP8AP2Q9UKL3 1982 aa20.23■□□□□ 0.83
SUPT16H-205ENST00000556217 AOC2O75106 756 aa20.22■□□□□ 0.83
SUPT16H-205ENST00000556217 AIMP1Q12904 312 aaKnown RBP20.22■□□□□ 0.83
SUPT16H-205ENST00000556217 TNIP1Q15025 636 aa20.22■□□□□ 0.83
SUPT16H-205ENST00000556217 NLRP10Q86W26 655 aa20.22■□□□□ 0.83
SUPT16H-205ENST00000556217 TRMT112Q9UI30 125 aaKnown RBP20.22■□□□□ 0.83
SUPT16H-205ENST00000556217 HCLS1P14317 486 aaPredicted RBP20.21■□□□□ 0.83
SUPT16H-205ENST00000556217 TMPOP42166 694 aaKnown RBP20.21■□□□□ 0.83
SUPT16H-205ENST00000556217 GMPSP49915 693 aaPredicted RBP20.21■□□□□ 0.83
SUPT16H-205ENST00000556217 KIAA2012Q0VF49 1180 aa20.21■□□□□ 0.83
SUPT16H-205ENST00000556217 CIAPIN1Q6FI81 312 aa20.21■□□□□ 0.83
SUPT16H-205ENST00000556217 TMC4Q7Z404 712 aa20.21■□□□□ 0.83
SUPT16H-205ENST00000556217 XAGE3Q8WTP9 111 aa20.21■□□□□ 0.83
SUPT16H-205ENST00000556217 NECTIN2Q92692 538 aa20.21■□□□□ 0.83
SUPT16H-205ENST00000556217 BCL2L13Q9BXK5 485 aa20.21■□□□□ 0.83
SUPT16H-205ENST00000556217 SH3TC1Q8TE82 1336 aa20.21■□□□□ 0.83
SUPT16H-205ENST00000556217 TCIRG1Q13488 830 aa20.2■□□□□ 0.82
SUPT16H-205ENST00000556217 DGKZQ13574 1117 aa20.2■□□□□ 0.82
SUPT16H-205ENST00000556217 GRAPQ13588 217 aa20.2■□□□□ 0.82
SUPT16H-205ENST00000556217 RALBP1Q15311 655 aa20.2■□□□□ 0.82
SUPT16H-205ENST00000556217 GRAPLQ8TC17 118 aaPredicted RBP20.2■□□□□ 0.82
SUPT16H-205ENST00000556217 ZC3H15Q8WU90 426 aaKnown RBP20.19■□□□□ 0.82
SUPT16H-205ENST00000556217 CELF2O95319 508 aaKnown RBP20.18■□□□□ 0.82
SUPT16H-205ENST00000556217 BRPF1P55201 1214 aaPredicted RBP20.18■□□□□ 0.82
SUPT16H-205ENST00000556217 HHIPL1Q96JK4 782 aa20.18■□□□□ 0.82
SUPT16H-205ENST00000556217 TAF1P21675 1872 aa20.18■□□□□ 0.82
SUPT16H-205ENST00000556217 RAD17O75943 681 aa20.17■□□□□ 0.82
SUPT16H-205ENST00000556217 SAPCD2Q86UD0 394 aa20.17■□□□□ 0.82
SUPT16H-205ENST00000556217 PGAP2Q9UHJ9 254 aa20.17■□□□□ 0.82
SUPT16H-205ENST00000556217 LRRC37AA6NMS7 1700 aa20.16■□□□□ 0.82
SUPT16H-205ENST00000556217 H7C1D1 291 aa20.15■□□□□ 0.82
SUPT16H-205ENST00000556217 CHL1O00533 1208 aa20.15■□□□□ 0.82
SUPT16H-205ENST00000556217 NEUROD2Q15784 382 aa20.15■□□□□ 0.82
SUPT16H-205ENST00000556217 CDC37L1Q7L3B6 337 aa20.15■□□□□ 0.82
SUPT16H-205ENST00000556217 GLIS2Q9BZE0 524 aaPredicted RBP20.15■□□□□ 0.82
SUPT16H-205ENST00000556217 DDX60Q8IY21 1712 aaKnown RBP20.15■□□□□ 0.82
SUPT16H-205ENST00000556217 PLBD2Q8NHP8 589 aa20.14■□□□□ 0.81
SUPT16H-205ENST00000556217 CHPF2Q9P2E5 772 aa20.14■□□□□ 0.81
SUPT16H-205ENST00000556217 CNOT7Q9UIV1 285 aaKnown RBP20.14■□□□□ 0.81
SUPT16H-205ENST00000556217 LAS1LQ9Y4W2 734 aaKnown RBP20.14■□□□□ 0.81
SUPT16H-205ENST00000556217 HDGFL1Q5TGJ6 251 aa20.13■□□□□ 0.81
SUPT16H-205ENST00000556217 ANKRD13DQ6ZTN6 518 aa20.13■□□□□ 0.81
SUPT16H-205ENST00000556217 ZNF408Q9H9D4 720 aa20.13■□□□□ 0.81
SUPT16H-205ENST00000556217 DUOX1Q9NRD9 1551 aa20.12■□□□□ 0.81
SUPT16H-205ENST00000556217 HOXB7P09629 217 aa20.12■□□□□ 0.81
SUPT16H-205ENST00000556217 HIRAP54198 1017 aaPredicted RBP20.12■□□□□ 0.81
SUPT16H-205ENST00000556217 WASHC4Q2M389 1173 aa20.12■□□□□ 0.81
SUPT16H-205ENST00000556217 CCDC146Q8IYE0 955 aa20.12■□□□□ 0.81
SUPT16H-205ENST00000556217 DBF4Q9UBU7 674 aaPredicted RBP20.12■□□□□ 0.81
SUPT16H-205ENST00000556217 YDJCA8MPS7 323 aa20.11■□□□□ 0.81
SUPT16H-205ENST00000556217 KRT24Q2M2I5 525 aa20.11■□□□□ 0.81
SUPT16H-205ENST00000556217 MICALL2Q8IY33 904 aa20.11■□□□□ 0.81
SUPT16H-205ENST00000556217 TRPM4Q8TD43 1214 aa20.11■□□□□ 0.81
SUPT16H-205ENST00000556217 DPF2Q92785 391 aa20.11■□□□□ 0.81
SUPT16H-205ENST00000556217 RUNDC1Q96C34 613 aa20.11■□□□□ 0.81
SUPT16H-205ENST00000556217 NSFL1CQ9UNZ2 370 aaKnown RBP20.11■□□□□ 0.81
SUPT16H-205ENST00000556217 NOGQ13253 232 aa20.1■□□□□ 0.81
SUPT16H-205ENST00000556217 WDR43Q15061 677 aaKnown RBP eCLIP20.1■□□□□ 0.81
SUPT16H-205ENST00000556217 SF3B3Q15393 1217 aaKnown RBP20.1■□□□□ 0.81
SUPT16H-205ENST00000556217 FAM89AQ96GI7 184 aa20.1■□□□□ 0.81
SUPT16H-205ENST00000556217 ISCA1Q9BUE6 129 aa20.1■□□□□ 0.81
SUPT16H-205ENST00000556217 HYPKQ9NX55 129 aa20.1■□□□□ 0.81
SUPT16H-205ENST00000556217 MYBBP1AQ9BQG0 1328 aaKnown RBP20.09■□□□□ 0.81
SUPT16H-205ENST00000556217 C6orf229H3BNL8 230 aa20.09■□□□□ 0.81
SUPT16H-205ENST00000556217 ZNF428Q96B54 188 aa20.09■□□□□ 0.81
SUPT16H-205ENST00000556217 EYA3Q99504 573 aa20.09■□□□□ 0.81
SUPT16H-205ENST00000556217 PSMD14O00487 310 aa20.08■□□□□ 0.81
SUPT16H-205ENST00000556217 RPS12P25398 132 aaKnown RBP20.08■□□□□ 0.81
SUPT16H-205ENST00000556217 USP48Q86UV5 1035 aa20.08■□□□□ 0.81
SUPT16H-205ENST00000556217 CELF1Q92879 486 aaKnown RBP20.08■□□□□ 0.81
SUPT16H-205ENST00000556217 DBNDD1Q9H9R9 158 aa20.08■□□□□ 0.81
SUPT16H-205ENST00000556217 TRIM35Q9UPQ4 493 aa20.08■□□□□ 0.81
SUPT16H-205ENST00000556217 ZBTB12Q9Y330 459 aaPredicted RBP20.08■□□□□ 0.81
SUPT16H-205ENST00000556217 POLR2AP24928 1970 aaKnown RBP20.08■□□□□ 0.8
SUPT16H-205ENST00000556217 SHTN1A0MZ66 631 aa20.07■□□□□ 0.8
SUPT16H-205ENST00000556217 ATP5J2-PTCD1G3V325 749 aa20.07■□□□□ 0.8
SUPT16H-205ENST00000556217 HSP90B1P14625 803 aaKnown RBP20.07■□□□□ 0.8
SUPT16H-205ENST00000556217 PRPF38BQ5VTL8 546 aaKnown RBP20.07■□□□□ 0.8
SUPT16H-205ENST00000556217 RIMBP2O15034 1052 aa20.06■□□□□ 0.8
SUPT16H-205ENST00000556217 SOX10P56693 466 aa20.06■□□□□ 0.8
SUPT16H-205ENST00000556217 HUNKP57058 714 aa20.06■□□□□ 0.8
SUPT16H-205ENST00000556217 TRIM28Q13263 835 aaKnown RBP20.06■□□□□ 0.8
SUPT16H-205ENST00000556217 IRS4O14654 1257 aaPredicted RBP20.05■□□□□ 0.8
SUPT16H-205ENST00000556217 ECE2O60344 883 aa20.05■□□□□ 0.8
SUPT16H-205ENST00000556217 GPSM2P81274 684 aa20.05■□□□□ 0.8
SUPT16H-205ENST00000556217 RTL5Q5HYW3 569 aaPredicted RBP20.05■□□□□ 0.8
SUPT16H-205ENST00000556217 SAMD7Q7Z3H4 446 aa20.05■□□□□ 0.8
SUPT16H-205ENST00000556217 KRT26Q7Z3Y9 468 aa20.05■□□□□ 0.8
SUPT16H-205ENST00000556217 DCPSQ96C86 337 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms