RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 RSPO4Q2I0M5 234 aaPredicted RBP5.51□□□□□ -1.53
SLIRP-202ENST00000553981 MICALL1Q8N3F8 863 aa5.51□□□□□ -1.53
SLIRP-202ENST00000553981 ZNF280CQ8ND82 737 aa5.51□□□□□ -1.53
SLIRP-202ENST00000553981 CEP63Q96MT8 703 aa5.51□□□□□ -1.53
SLIRP-202ENST00000553981 PHACTR1Q9C0D0 580 aa5.51□□□□□ -1.53
SLIRP-202ENST00000553981 MADDQ8WXG6 1647 aa5.51□□□□□ -1.53
SLIRP-202ENST00000553981 BCORL1Q5H9F3 1711 aa5.51□□□□□ -1.53
SLIRP-202ENST00000553981 ABCA9Q8IUA7 1624 aa5.5□□□□□ -1.53
SLIRP-202ENST00000553981 M0R2N6 131 aa5.5□□□□□ -1.53
SLIRP-202ENST00000553981 ATP9BO43861 1147 aa5.5□□□□□ -1.53
SLIRP-202ENST00000553981 NID1P14543 1247 aa5.5□□□□□ -1.53
SLIRP-202ENST00000553981 TYRO3Q06418 890 aa5.5□□□□□ -1.53
SLIRP-202ENST00000553981 HDGFL1Q5TGJ6 251 aa5.5□□□□□ -1.53
SLIRP-202ENST00000553981 LARGE2Q8N3Y3 721 aa5.5□□□□□ -1.53
SLIRP-202ENST00000553981 OGFOD1Q8N543 542 aa5.5□□□□□ -1.53
SLIRP-202ENST00000553981 TSEN2Q8NCE0 465 aaKnown RBP5.5□□□□□ -1.53
SLIRP-202ENST00000553981 FBXO41Q8TF61 875 aa5.5□□□□□ -1.53
SLIRP-202ENST00000553981 ANKIB1Q9P2G1 1089 aa5.5□□□□□ -1.53
SLIRP-202ENST00000553981 MKRN1Q9UHC7 482 aaKnown RBP5.5□□□□□ -1.53
SLIRP-202ENST00000553981 CHMP3Q9Y3E7 222 aa5.5□□□□□ -1.53
SLIRP-202ENST00000553981 PALM3A6NDB9 673 aaPredicted RBP5.49□□□□□ -1.53
SLIRP-202ENST00000553981 C21orf2O43822 256 aa5.49□□□□□ -1.53
SLIRP-202ENST00000553981 DKK1O94907 266 aa5.49□□□□□ -1.53
SLIRP-202ENST00000553981 APBA3O96018 575 aa5.49□□□□□ -1.53
SLIRP-202ENST00000553981 HSPA2P54652 639 aa5.49□□□□□ -1.53
SLIRP-202ENST00000553981 NEUROD1Q13562 356 aa5.49□□□□□ -1.53
SLIRP-202ENST00000553981 NKAPLQ5M9Q1 402 aa5.49□□□□□ -1.53
SLIRP-202ENST00000553981 C20orf204Q6ZNR8 217 aa5.49□□□□□ -1.53
SLIRP-202ENST00000553981 SIX5Q8N196 739 aa5.49□□□□□ -1.53
SLIRP-202ENST00000553981 SUSD3Q96L08 255 aa5.49□□□□□ -1.53
SLIRP-202ENST00000553981 TPSG1Q9NRR2 321 aa5.49□□□□□ -1.53
SLIRP-202ENST00000553981 KCNH4Q9UQ05 1017 aa5.49□□□□□ -1.53
SLIRP-202ENST00000553981 SAMD9Q5K651 1589 aa5.48□□□□□ -1.53
SLIRP-202ENST00000553981 UBTFP17480 764 aaKnown RBP5.48□□□□□ -1.53
SLIRP-202ENST00000553981 TRIM28Q13263 835 aaKnown RBP5.48□□□□□ -1.53
SLIRP-202ENST00000553981 GRIK4Q16099 956 aa5.48□□□□□ -1.53
SLIRP-202ENST00000553981 ZMYM1Q5SVZ6 1142 aa5.48□□□□□ -1.53
SLIRP-202ENST00000553981 ILDR2Q71H61 639 aa5.48□□□□□ -1.53
SLIRP-202ENST00000553981 BHMTQ93088 406 aa5.48□□□□□ -1.53
SLIRP-202ENST00000553981 ZNF594Q96JF6 807 aaPredicted RBP5.48□□□□□ -1.53
SLIRP-202ENST00000553981 YEATS2Q9ULM3 1422 aa5.48□□□□□ -1.53
SLIRP-202ENST00000553981 RIMS1Q86UR5 1692 aaKnown RBP5.47□□□□□ -1.53
SLIRP-202ENST00000553981 PCF11O94913 1555 aaKnown RBP5.47□□□□□ -1.53
SLIRP-202ENST00000553981 NUP153P49790 1475 aaKnown RBP5.47□□□□□ -1.53
SLIRP-202ENST00000553981 ATAD2Q6PL18 1390 aa5.47□□□□□ -1.53
SLIRP-202ENST00000553981 PPP1R12BO60237 982 aaPredicted RBP5.47□□□□□ -1.53
SLIRP-202ENST00000553981 FLIIQ13045 1269 aa5.47□□□□□ -1.53
SLIRP-202ENST00000553981 BTLAQ7Z6A9 289 aa5.47□□□□□ -1.53
SLIRP-202ENST00000553981 ALDH16A1Q8IZ83 802 aa5.47□□□□□ -1.53
SLIRP-202ENST00000553981 NACC1Q96RE7 527 aa5.47□□□□□ -1.53
SLIRP-202ENST00000553981 C2orf49Q9BVC5 232 aaPredicted RBP5.47□□□□□ -1.53
SLIRP-202ENST00000553981 KRTAP4-8Q9BYQ9 185 aa5.47□□□□□ -1.53
SLIRP-202ENST00000553981 RICTORQ6R327 1708 aa5.47□□□□□ -1.53
SLIRP-202ENST00000553981 DYRK3O43781 588 aa5.46□□□□□ -1.54
SLIRP-202ENST00000553981 PRKCSHP14314 528 aaPredicted RBP5.46□□□□□ -1.54
SLIRP-202ENST00000553981 TRAPPC3LQ5T215 181 aa5.46□□□□□ -1.54
SLIRP-202ENST00000553981 STAG2Q8N3U4 1231 aa5.46□□□□□ -1.54
SLIRP-202ENST00000553981 RBM19Q9Y4C8 960 aaKnown RBP5.46□□□□□ -1.54
SLIRP-202ENST00000553981 GOLGA3Q08378 1498 aa5.45□□□□□ -1.54
SLIRP-202ENST00000553981 RAPGEF6Q8TEU7 1601 aa5.45□□□□□ -1.54
SLIRP-202ENST00000553981 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.45□□□□□ -1.54
SLIRP-202ENST00000553981 LILRB5O75023 590 aa5.45□□□□□ -1.54
SLIRP-202ENST00000553981 TBC1D8BQ0IIM8 1120 aa5.45□□□□□ -1.54
SLIRP-202ENST00000553981 FOXD4L6Q3SYB3 417 aaPredicted RBP5.45□□□□□ -1.54
SLIRP-202ENST00000553981 FOXD4L3Q6VB84 417 aaPredicted RBP5.45□□□□□ -1.54
SLIRP-202ENST00000553981 SCG3Q8WXD2 468 aaKnown RBP5.45□□□□□ -1.54
SLIRP-202ENST00000553981 UBE2OQ9C0C9 1292 aaKnown RBP5.45□□□□□ -1.54
SLIRP-202ENST00000553981 SLC6A14Q9UN76 642 aa5.45□□□□□ -1.54
SLIRP-202ENST00000553981 FHOD3Q2V2M9 1422 aa5.45□□□□□ -1.54
SLIRP-202ENST00000553981 TTC37Q6PGP7 1564 aa5.45□□□□□ -1.54
SLIRP-202ENST00000553981 NEO1Q92859 1461 aa5.45□□□□□ -1.54
SLIRP-202ENST00000553981 ARHGEF40Q8TER5 1519 aa5.44□□□□□ -1.54
SLIRP-202ENST00000553981 A0A0A0MRY4 1105 aa5.44□□□□□ -1.54
SLIRP-202ENST00000553981 SELPP16109 830 aa5.44□□□□□ -1.54
SLIRP-202ENST00000553981 RASA1P20936 1047 aa5.44□□□□□ -1.54
SLIRP-202ENST00000553981 CEBPAP49715 358 aaPredicted RBP5.44□□□□□ -1.54
SLIRP-202ENST00000553981 HIF1AQ16665 826 aa5.44□□□□□ -1.54
SLIRP-202ENST00000553981 GAS2L2Q8NHY3 880 aa5.44□□□□□ -1.54
SLIRP-202ENST00000553981 NGLY1Q96IV0 654 aa5.44□□□□□ -1.54
SLIRP-202ENST00000553981 IGFLR1Q9H665 355 aa5.44□□□□□ -1.54
SLIRP-202ENST00000553981 AKNAQ7Z591 1439 aa5.43□□□□□ -1.54
SLIRP-202ENST00000553981 STRCQ7RTU9 1775 aa5.43□□□□□ -1.54
SLIRP-202ENST00000553981 C9orf172C9J069 976 aa5.43□□□□□ -1.54
SLIRP-202ENST00000553981 SEC13P55735 322 aa5.43□□□□□ -1.54
SLIRP-202ENST00000553981 ADGRE1Q14246 886 aa5.43□□□□□ -1.54
SLIRP-202ENST00000553981 NUDT8Q8WV74 236 aa5.43□□□□□ -1.54
SLIRP-202ENST00000553981 GSX2Q9BZM3 304 aa5.43□□□□□ -1.54
SLIRP-202ENST00000553981 JPH1Q9HDC5 661 aaPredicted RBP5.43□□□□□ -1.54
SLIRP-202ENST00000553981 TFIP11Q9UBB9 837 aaKnown RBP5.43□□□□□ -1.54
SLIRP-202ENST00000553981 MAFBQ9Y5Q3 323 aaPredicted RBP5.43□□□□□ -1.54
SLIRP-202ENST00000553981 HECW1Q76N89 1606 aa5.43□□□□□ -1.54
SLIRP-202ENST00000553981 CDK13Q14004 1512 aaKnown RBP5.43□□□□□ -1.54
SLIRP-202ENST00000553981 ELNP15502 786 aa5.42□□□□□ -1.54
SLIRP-202ENST00000553981 RANGAP1P46060 587 aaPredicted RBP5.42□□□□□ -1.54
SLIRP-202ENST00000553981 MLECQ14165 292 aa5.42□□□□□ -1.54
SLIRP-202ENST00000553981 MBTPS1Q14703 1052 aa5.42□□□□□ -1.54
SLIRP-202ENST00000553981 RTN1Q16799 776 aa5.42□□□□□ -1.54
SLIRP-202ENST00000553981 IER5Q5VY09 327 aa5.42□□□□□ -1.54
SLIRP-202ENST00000553981 GLMNQ92990 594 aa5.42□□□□□ -1.54
SLIRP-202ENST00000553981 PSMG3-AS1Q96PY0 264 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms