RNA–Protein interactions for RNA: ENST00000550224.5

PRIM1-205, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,206 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-205ENST00000550224 GMPRP36959 345 aa8.81□□□□□ -1
PRIM1-205ENST00000550224 RARSP54136 660 aaKnown RBP8.81□□□□□ -1
PRIM1-205ENST00000550224 EXOSC9Q06265 439 aaKnown RBP8.81□□□□□ -1
PRIM1-205ENST00000550224 TAF7Q15545 349 aaPredicted RBP8.81□□□□□ -1
PRIM1-205ENST00000550224 MTHFSDQ2M296 383 aaKnown RBP8.81□□□□□ -1
PRIM1-205ENST00000550224 NBPF6Q5VWK0 638 aa8.81□□□□□ -1
PRIM1-205ENST00000550224 AEBP1Q8IUX7 1158 aa8.81□□□□□ -1
PRIM1-205ENST00000550224 PRR7Q8TB68 274 aa8.81□□□□□ -1
PRIM1-205ENST00000550224 HPS1Q92902 700 aa8.81□□□□□ -1
PRIM1-205ENST00000550224 MRGPRX2Q96LB1 330 aa8.81□□□□□ -1
PRIM1-205ENST00000550224 NBPF4Q96M43 638 aa8.81□□□□□ -1
PRIM1-205ENST00000550224 PXDNQ92626 1479 aa8.81□□□□□ -1
PRIM1-205ENST00000550224 FANCIQ9NVI1 1328 aa8.8□□□□□ -1
PRIM1-205ENST00000550224 NFAT5O94916 1531 aa8.8□□□□□ -1
PRIM1-205ENST00000550224 PHRF1Q9P1Y6 1649 aaKnown RBP8.8□□□□□ -1
PRIM1-205ENST00000550224 TRPM3Q9HCF6 1732 aaPredicted RBP8.8□□□□□ -1
PRIM1-205ENST00000550224 CHL1O00533 1208 aa8.8□□□□□ -1
PRIM1-205ENST00000550224 ZNF853P0CG23 659 aa8.8□□□□□ -1
PRIM1-205ENST00000550224 BRPF1P55201 1214 aaPredicted RBP8.8□□□□□ -1
PRIM1-205ENST00000550224 TEFQ10587 303 aa8.8□□□□□ -1
PRIM1-205ENST00000550224 TPRNQ4KMQ1 711 aa8.8□□□□□ -1
PRIM1-205ENST00000550224 ZKSCAN2Q63HK3 967 aa8.8□□□□□ -1
PRIM1-205ENST00000550224 ARHGAP45Q92619 1136 aa8.8□□□□□ -1
PRIM1-205ENST00000550224 NXF1Q9UBU9 619 aaKnown RBP8.8□□□□□ -1
PRIM1-205ENST00000550224 KIAA0232Q92628 1395 aa8.79□□□□□ -1
PRIM1-205ENST00000550224 MAP3K5Q99683 1374 aa8.79□□□□□ -1
PRIM1-205ENST00000550224 TUSC1Q2TAM9 212 aa8.79□□□□□ -1
PRIM1-205ENST00000550224 ZNF530Q6P9A1 599 aaPredicted RBP8.79□□□□□ -1
PRIM1-205ENST00000550224 FTSJ3Q8IY81 847 aaKnown RBP8.79□□□□□ -1
PRIM1-205ENST00000550224 FRAT1Q92837 279 aaPredicted RBP8.79□□□□□ -1
PRIM1-205ENST00000550224 DDX17Q92841 729 aaKnown RBP8.79□□□□□ -1
PRIM1-205ENST00000550224 SMC4Q9NTJ3 1288 aa8.79□□□□□ -1
PRIM1-205ENST00000550224 ALS2Q96Q42 1657 aa8.78□□□□□ -1
PRIM1-205ENST00000550224 CLK2P49760 499 aaKnown RBP8.78□□□□□ -1
PRIM1-205ENST00000550224 IRX6P78412 446 aaPredicted RBP8.78□□□□□ -1
PRIM1-205ENST00000550224 TRIM32Q13049 653 aa8.78□□□□□ -1
PRIM1-205ENST00000550224 CSPP1Q1MSJ5 1256 aa8.78□□□□□ -1
PRIM1-205ENST00000550224 TWISTNBQ3B726 338 aaPredicted RBP8.78□□□□□ -1
PRIM1-205ENST00000550224 PRPF38BQ5VTL8 546 aaKnown RBP8.78□□□□□ -1
PRIM1-205ENST00000550224 TOM1L2Q6ZVM7 507 aa8.78□□□□□ -1
PRIM1-205ENST00000550224 IFNL2Q8IZJ0 200 aa8.78□□□□□ -1
PRIM1-205ENST00000550224 IRF7Q92985 503 aa8.78□□□□□ -1
PRIM1-205ENST00000550224 TSR2Q969E8 191 aaKnown RBP8.78□□□□□ -1
PRIM1-205ENST00000550224 NUDT12Q9BQG2 462 aa8.78□□□□□ -1
PRIM1-205ENST00000550224 STK31Q9BXU1 1019 aa8.78□□□□□ -1
PRIM1-205ENST00000550224 ZBTB3Q9H5J0 574 aa8.78□□□□□ -1
PRIM1-205ENST00000550224 TSPYL4Q9UJ04 414 aa8.78□□□□□ -1
PRIM1-205ENST00000550224 MED1Q15648 1581 aaPredicted RBP8.78□□□□□ -1
PRIM1-205ENST00000550224 XIRP1Q702N8 1843 aaKnown RBP8.77□□□□□ -1
PRIM1-205ENST00000550224 PEAK1Q9H792 1746 aa8.77□□□□□ -1
PRIM1-205ENST00000550224 LTN1O94822 1766 aa8.77□□□□□ -1.01
PRIM1-205ENST00000550224 UBAP1LF5GYI3 381 aa8.77□□□□□ -1.01
PRIM1-205ENST00000550224 LILRB3O75022 631 aa8.77□□□□□ -1.01
PRIM1-205ENST00000550224 VEGFBP49765 207 aa8.77□□□□□ -1.01
PRIM1-205ENST00000550224 PTPRNQ16849 979 aa8.77□□□□□ -1.01
PRIM1-205ENST00000550224 CCDC30Q5VVM6 783 aa8.77□□□□□ -1.01
PRIM1-205ENST00000550224 DESI1Q6ICB0 168 aa8.77□□□□□ -1.01
PRIM1-205ENST00000550224 PTCRAQ6ISU1 281 aaPredicted RBP8.77□□□□□ -1.01
PRIM1-205ENST00000550224 MCM10Q7L590 875 aa8.77□□□□□ -1.01
PRIM1-205ENST00000550224 DZIP1LQ8IYY4 767 aaKnown RBP8.77□□□□□ -1.01
PRIM1-205ENST00000550224 CARD10Q9BWT7 1032 aa8.77□□□□□ -1.01
PRIM1-205ENST00000550224 API5Q9BZZ5 524 aaKnown RBP8.77□□□□□ -1.01
PRIM1-205ENST00000550224 MBIPQ9NS73 344 aa8.77□□□□□ -1.01
PRIM1-205ENST00000550224 NCAPD2Q15021 1401 aa8.77□□□□□ -1.01
PRIM1-205ENST00000550224 WDR17Q8IZU2 1322 aa8.77□□□□□ -1.01
PRIM1-205ENST00000550224 SPDYE5A6NIY4 337 aa8.76□□□□□ -1.01
PRIM1-205ENST00000550224 VAMP4O75379 141 aa8.76□□□□□ -1.01
PRIM1-205ENST00000550224 BCAR3O75815 825 aa8.76□□□□□ -1.01
PRIM1-205ENST00000550224 HOXB7P09629 217 aa8.76□□□□□ -1.01
PRIM1-205ENST00000550224 CCNYL3P0C7X3 344 aa8.76□□□□□ -1.01
PRIM1-205ENST00000550224 SKOR1P84550 965 aa8.76□□□□□ -1.01
PRIM1-205ENST00000550224 SUZ12Q15022 739 aaKnown RBP8.76□□□□□ -1.01
PRIM1-205ENST00000550224 CHRNA2Q15822 529 aa8.76□□□□□ -1.01
PRIM1-205ENST00000550224 SH3D19Q5HYK7 790 aa8.76□□□□□ -1.01
PRIM1-205ENST00000550224 CDCA7Q9BWT1 371 aaPredicted RBP8.76□□□□□ -1.01
PRIM1-205ENST00000550224 RGPD1P0DJD0 1748 aa8.76□□□□□ -1.01
PRIM1-205ENST00000550224 FAM83GA6ND36 823 aa8.75□□□□□ -1.01
PRIM1-205ENST00000550224 PLIN1O60240 522 aa8.75□□□□□ -1.01
PRIM1-205ENST00000550224 ATF7IPQ6VMQ6 1270 aa8.75□□□□□ -1.01
PRIM1-205ENST00000550224 CCDC24Q8N4L8 307 aa8.75□□□□□ -1.01
PRIM1-205ENST00000550224 USHBP1Q8N6Y0 703 aa8.75□□□□□ -1.01
PRIM1-205ENST00000550224 DCAF5Q96JK2 942 aa8.75□□□□□ -1.01
PRIM1-205ENST00000550224 DDX19BQ9UMR2 479 aa8.75□□□□□ -1.01
PRIM1-205ENST00000550224 OVOS2A0A0G2JMS6 1433 aa8.74□□□□□ -1.01
PRIM1-205ENST00000550224 LTBP4Q8N2S1 1624 aa8.74□□□□□ -1.01
PRIM1-205ENST00000550224 BTBD11A6QL63 1104 aa8.74□□□□□ -1.01
PRIM1-205ENST00000550224 IL2RBP14784 551 aa8.74□□□□□ -1.01
PRIM1-205ENST00000550224 PIP4K2BP78356 416 aa8.74□□□□□ -1.01
PRIM1-205ENST00000550224 DCTN1Q14203 1278 aa8.74□□□□□ -1.01
PRIM1-205ENST00000550224 RTL5Q5HYW3 569 aaPredicted RBP8.74□□□□□ -1.01
PRIM1-205ENST00000550224 ZCRB1Q8TBF4 217 aaKnown RBP8.74□□□□□ -1.01
PRIM1-205ENST00000550224 SSH1Q8WYL5 1049 aa8.74□□□□□ -1.01
PRIM1-205ENST00000550224 DDRGK1Q96HY6 314 aa8.74□□□□□ -1.01
PRIM1-205ENST00000550224 THUMPD2Q9BTF0 503 aaKnown RBP8.74□□□□□ -1.01
PRIM1-205ENST00000550224 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.74□□□□□ -1.01
PRIM1-205ENST00000550224 POLR3EQ9NVU0 708 aa8.74□□□□□ -1.01
PRIM1-205ENST00000550224 HDAC5Q9UQL6 1122 aa8.74□□□□□ -1.01
PRIM1-205ENST00000550224 THRAP3Q9Y2W1 955 aaKnown RBP8.74□□□□□ -1.01
PRIM1-205ENST00000550224 PTPRCP08575 1304 aa8.74□□□□□ -1.01
PRIM1-205ENST00000550224 MARF1Q9Y4F3 1742 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms