RNA–Protein interactions for RNA: ENST00000549526.1

SMARCD1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-207ENST00000549526 HOXA10P31260 410 aaPredicted RBP11.32□□□□□ -0.6
SMARCD1-207ENST00000549526 PIP4K2AP48426 406 aaPredicted RBP11.32□□□□□ -0.6
SMARCD1-207ENST00000549526 CDCA5Q96FF9 252 aa11.32□□□□□ -0.6
SMARCD1-207ENST00000549526 RBM17Q96I25 401 aaKnown RBP11.32□□□□□ -0.6
SMARCD1-207ENST00000549526 FKBP1BP68106 108 aa11.31□□□□□ -0.6
SMARCD1-207ENST00000549526 SREBF2Q12772 1141 aa11.31□□□□□ -0.6
SMARCD1-207ENST00000549526 MKRN3Q13064 507 aaKnown RBP11.31□□□□□ -0.6
SMARCD1-207ENST00000549526 SLC4A8Q2Y0W8 1093 aa11.31□□□□□ -0.6
SMARCD1-207ENST00000549526 NUTM1Q86Y26 1132 aa11.31□□□□□ -0.6
SMARCD1-207ENST00000549526 DPF2Q92785 391 aa11.31□□□□□ -0.6
SMARCD1-207ENST00000549526 ARMC5Q96C12 935 aa11.31□□□□□ -0.6
SMARCD1-207ENST00000549526 CRAMP1Q96RY5 1269 aa11.31□□□□□ -0.6
SMARCD1-207ENST00000549526 UBE2Q2LH0YL09 131 aa11.3□□□□□ -0.6
SMARCD1-207ENST00000549526 ZNF790Q6PG37 636 aa11.3□□□□□ -0.6
SMARCD1-207ENST00000549526 LRCH3Q96II8 777 aa11.3□□□□□ -0.6
SMARCD1-207ENST00000549526 CFHR5Q9BXR6 569 aa11.3□□□□□ -0.6
SMARCD1-207ENST00000549526 PRDM6Q9NQX0 595 aa11.3□□□□□ -0.6
SMARCD1-207ENST00000549526 KIF7Q2M1P5 1343 aa11.3□□□□□ -0.6
SMARCD1-207ENST00000549526 DPP8Q6V1X1 898 aaPredicted RBP11.29□□□□□ -0.6
SMARCD1-207ENST00000549526 ANKRD13DQ6ZTN6 518 aa11.29□□□□□ -0.6
SMARCD1-207ENST00000549526 MOB2Q70IA6 237 aa11.29□□□□□ -0.6
SMARCD1-207ENST00000549526 FMNL2Q96PY5 1086 aa11.29□□□□□ -0.6
SMARCD1-207ENST00000549526 NYXQ9GZU5 481 aa11.29□□□□□ -0.6
SMARCD1-207ENST00000549526 GGA3Q9NZ52 723 aa11.29□□□□□ -0.6
SMARCD1-207ENST00000549526 ATP6V0A2Q9Y487 856 aa11.29□□□□□ -0.6
SMARCD1-207ENST00000549526 YDJCA8MPS7 323 aa11.28□□□□□ -0.6
SMARCD1-207ENST00000549526 SOX1O00570 391 aaPredicted RBP11.28□□□□□ -0.6
SMARCD1-207ENST00000549526 ALDH1A1P00352 501 aa11.28□□□□□ -0.6
SMARCD1-207ENST00000549526 MYCP01106 439 aaPredicted RBP11.28□□□□□ -0.6
SMARCD1-207ENST00000549526 KIAA2012Q0VF49 1180 aa11.28□□□□□ -0.6
SMARCD1-207ENST00000549526 CDCA8Q53HL2 280 aa11.28□□□□□ -0.6
SMARCD1-207ENST00000549526 NBPF11Q86T75 865 aa11.28□□□□□ -0.6
SMARCD1-207ENST00000549526 ERO1AQ96HE7 468 aa11.28□□□□□ -0.6
SMARCD1-207ENST00000549526 RTFDC1Q9BY42 306 aaPredicted RBP11.28□□□□□ -0.6
SMARCD1-207ENST00000549526 WTIPA6NIX2 430 aaPredicted RBP11.27□□□□□ -0.61
SMARCD1-207ENST00000549526 PSMD14O00487 310 aa11.27□□□□□ -0.61
SMARCD1-207ENST00000549526 TEFQ10587 303 aa11.27□□□□□ -0.61
SMARCD1-207ENST00000549526 TTLL12Q14166 644 aaPredicted RBP11.27□□□□□ -0.61
SMARCD1-207ENST00000549526 HLFQ16534 295 aa11.27□□□□□ -0.61
SMARCD1-207ENST00000549526 KIF4BQ2VIQ3 1234 aa11.27□□□□□ -0.61
SMARCD1-207ENST00000549526 MPNDQ8N594 471 aa11.27□□□□□ -0.61
SMARCD1-207ENST00000549526 DEFB123Q8N688 67 aa11.27□□□□□ -0.61
SMARCD1-207ENST00000549526 USP16Q9Y5T5 823 aa11.27□□□□□ -0.61
SMARCD1-207ENST00000549526 ABCC12Q96J65 1359 aa11.27□□□□□ -0.61
SMARCD1-207ENST00000549526 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.26□□□□□ -0.61
SMARCD1-207ENST00000549526 CD99L2Q8TCZ2 262 aa11.26□□□□□ -0.61
SMARCD1-207ENST00000549526 ZNF333Q96JL9 665 aa11.26□□□□□ -0.61
SMARCD1-207ENST00000549526 PRO3102Q9H379 93 aa11.26□□□□□ -0.61
SMARCD1-207ENST00000549526 EFCC1Q9HA90 598 aa11.26□□□□□ -0.61
SMARCD1-207ENST00000549526 STXBP5LQ9Y2K9 1186 aa11.26□□□□□ -0.61
SMARCD1-207ENST00000549526 ASTN2O75129 1339 aaPredicted RBP11.26□□□□□ -0.61
SMARCD1-207ENST00000549526 RGL2O15211 777 aa11.25□□□□□ -0.61
SMARCD1-207ENST00000549526 COL9A1P20849 921 aa11.25□□□□□ -0.61
SMARCD1-207ENST00000549526 MTHFSDQ2M296 383 aaKnown RBP11.25□□□□□ -0.61
SMARCD1-207ENST00000549526 SLC9C1Q4G0N8 1177 aa11.25□□□□□ -0.61
SMARCD1-207ENST00000549526 ANGEL2Q5VTE6 544 aaKnown RBP11.25□□□□□ -0.61
SMARCD1-207ENST00000549526 LAMA3Q16787 3333 aa11.24□□□□□ -0.61
SMARCD1-207ENST00000549526 A0A1W2PPC1 479 aa11.24□□□□□ -0.61
SMARCD1-207ENST00000549526 RPS12P25398 132 aaKnown RBP11.24□□□□□ -0.61
SMARCD1-207ENST00000549526 TCIRG1Q13488 830 aa11.24□□□□□ -0.61
SMARCD1-207ENST00000549526 NR2E3Q9Y5X4 410 aa11.24□□□□□ -0.61
SMARCD1-207ENST00000549526 VCANP13611 3396 aa11.23□□□□□ -0.61
SMARCD1-207ENST00000549526 HMOX1P09601 288 aa11.23□□□□□ -0.61
SMARCD1-207ENST00000549526 SCARF1Q14162 830 aa11.23□□□□□ -0.61
SMARCD1-207ENST00000549526 PRAMEF18Q5VWM3 479 aa11.23□□□□□ -0.61
SMARCD1-207ENST00000549526 SP8Q8IXZ3 490 aa11.23□□□□□ -0.61
SMARCD1-207ENST00000549526 RIC1Q4ADV7 1423 aa11.23□□□□□ -0.61
SMARCD1-207ENST00000549526 IL13P35225 146 aa11.22□□□□□ -0.61
SMARCD1-207ENST00000549526 INHBEP58166 350 aa11.22□□□□□ -0.61
SMARCD1-207ENST00000549526 Q7L0L9 218 aa11.22□□□□□ -0.61
SMARCD1-207ENST00000549526 IFNL1Q8IU54 200 aa11.22□□□□□ -0.61
SMARCD1-207ENST00000549526 NLRP3Q96P20 1036 aa11.22□□□□□ -0.61
SMARCD1-207ENST00000549526 DBNDD1Q9H9R9 158 aa11.22□□□□□ -0.61
SMARCD1-207ENST00000549526 SCAF8Q9UPN6 1271 aaKnown RBP11.22□□□□□ -0.61
SMARCD1-207ENST00000549526 NUP98P52948 1817 aa11.21□□□□□ -0.61
SMARCD1-207ENST00000549526 CLSPNQ9HAW4 1339 aa11.21□□□□□ -0.61
SMARCD1-207ENST00000549526 KCNQ3O43525 872 aa11.21□□□□□ -0.61
SMARCD1-207ENST00000549526 BBOX1O75936 387 aa11.21□□□□□ -0.61
SMARCD1-207ENST00000549526 WASHC4Q2M389 1173 aa11.21□□□□□ -0.61
SMARCD1-207ENST00000549526 GPR153Q6NV75 609 aa11.21□□□□□ -0.61
SMARCD1-207ENST00000549526 C3orf67Q6ZVT6 689 aa11.21□□□□□ -0.61
SMARCD1-207ENST00000549526 CCER1Q8TC90 406 aaPredicted RBP11.21□□□□□ -0.61
SMARCD1-207ENST00000549526 HTATIP2Q9BUP3 242 aa11.21□□□□□ -0.61
SMARCD1-207ENST00000549526 KCNQ5Q9NR82 932 aa11.21□□□□□ -0.61
SMARCD1-207ENST00000549526 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.21□□□□□ -0.61
SMARCD1-207ENST00000549526 BTBD11A6QL63 1104 aa11.2□□□□□ -0.62
SMARCD1-207ENST00000549526 NBPF26B4DH59 902 aa11.2□□□□□ -0.62
SMARCD1-207ENST00000549526 RIMBP2O15034 1052 aa11.2□□□□□ -0.62
SMARCD1-207ENST00000549526 GPTP24298 496 aa11.2□□□□□ -0.62
SMARCD1-207ENST00000549526 NF2P35240 595 aa11.2□□□□□ -0.62
SMARCD1-207ENST00000549526 SP3Q02447 781 aa11.2□□□□□ -0.62
SMARCD1-207ENST00000549526 SUSD4Q5VX71 490 aa11.2□□□□□ -0.62
SMARCD1-207ENST00000549526 SPRYD7Q5W111 196 aa11.2□□□□□ -0.62
SMARCD1-207ENST00000549526 NBPF10Q6P3W6 841 aaKnown RBP11.2□□□□□ -0.62
SMARCD1-207ENST00000549526 NGEFQ8N5V2 710 aa11.2□□□□□ -0.62
SMARCD1-207ENST00000549526 IL17REQ8NFR9 667 aa11.2□□□□□ -0.62
SMARCD1-207ENST00000549526 STAP2Q9UGK3 403 aa11.2□□□□□ -0.62
SMARCD1-207ENST00000549526 ZNF609O15014 1411 aa11.19□□□□□ -0.62
SMARCD1-207ENST00000549526 ABCC4O15439 1325 aa11.19□□□□□ -0.62
SMARCD1-207ENST00000549526 ERBB4Q15303 1308 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms