RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 FAM81BQ96LP2 452 aa5.98□□□□□ -1.45
UBE4A-203ENST00000545354 DHX36Q9H2U1 1008 aaKnown RBP5.98□□□□□ -1.45
UBE4A-203ENST00000545354 TUBA8Q9NY65 449 aaPredicted RBP5.98□□□□□ -1.45
UBE4A-203ENST00000545354 SPATA7Q9P0W8 599 aa5.98□□□□□ -1.45
UBE4A-203ENST00000545354 CHPF2Q9P2E5 772 aa5.98□□□□□ -1.45
UBE4A-203ENST00000545354 PCSK1NQ9UHG2 260 aa5.98□□□□□ -1.45
UBE4A-203ENST00000545354 CEP104O60308 925 aa5.98□□□□□ -1.45
UBE4A-203ENST00000545354 HIP1RO75146 1068 aa5.98□□□□□ -1.45
UBE4A-203ENST00000545354 NEBLO76041 1014 aa5.98□□□□□ -1.45
UBE4A-203ENST00000545354 CSB-PGBD3P0DP91 1061 aa5.98□□□□□ -1.45
UBE4A-203ENST00000545354 HOXB1P14653 301 aaPredicted RBP5.98□□□□□ -1.45
UBE4A-203ENST00000545354 CD53P19397 219 aa5.98□□□□□ -1.45
UBE4A-203ENST00000545354 ABL2P42684 1182 aa5.98□□□□□ -1.45
UBE4A-203ENST00000545354 CLK1P49759 484 aaKnown RBP5.98□□□□□ -1.45
UBE4A-203ENST00000545354 PSMD7P51665 324 aa5.98□□□□□ -1.45
UBE4A-203ENST00000545354 NBPF8Q3BBV2 869 aa5.98□□□□□ -1.45
UBE4A-203ENST00000545354 KBTBD12Q3ZCT8 623 aa5.98□□□□□ -1.45
UBE4A-203ENST00000545354 MICALCLQ6ZW33 695 aa5.98□□□□□ -1.45
UBE4A-203ENST00000545354 ZNF710Q8N1W2 664 aa5.98□□□□□ -1.45
UBE4A-203ENST00000545354 MICALL1Q8N3F8 863 aa5.98□□□□□ -1.45
UBE4A-203ENST00000545354 RBM46Q8TBY0 533 aaKnown RBP5.98□□□□□ -1.45
UBE4A-203ENST00000545354 NAP1L3Q99457 506 aaPredicted RBP5.98□□□□□ -1.45
UBE4A-203ENST00000545354 ZHX3Q9H4I2 956 aa5.98□□□□□ -1.45
UBE4A-203ENST00000545354 GPHNQ9NQX3 736 aaPredicted RBP5.98□□□□□ -1.45
UBE4A-203ENST00000545354 RABL2AQ9UBK7 228 aaPredicted RBP5.98□□□□□ -1.45
UBE4A-203ENST00000545354 MAFFQ9ULX9 164 aa5.98□□□□□ -1.45
UBE4A-203ENST00000545354 LRRFIP2Q9Y608 721 aaKnown RBP5.98□□□□□ -1.45
UBE4A-203ENST00000545354 CPP00450 1065 aa5.97□□□□□ -1.45
UBE4A-203ENST00000545354 IGHDP01880 384 aa5.97□□□□□ -1.45
UBE4A-203ENST00000545354 ZNF24P17028 368 aa5.97□□□□□ -1.45
UBE4A-203ENST00000545354 TRIM21P19474 475 aaKnown RBP5.97□□□□□ -1.45
UBE4A-203ENST00000545354 HOXD10P28358 340 aa5.97□□□□□ -1.45
UBE4A-203ENST00000545354 INHBEP58166 350 aa5.97□□□□□ -1.45
UBE4A-203ENST00000545354 GRIK3Q13003 919 aa5.97□□□□□ -1.45
UBE4A-203ENST00000545354 NEDD9Q14511 834 aa5.97□□□□□ -1.45
UBE4A-203ENST00000545354 CNGA3Q16281 694 aa5.97□□□□□ -1.45
UBE4A-203ENST00000545354 SLC4A8Q2Y0W8 1093 aa5.97□□□□□ -1.45
UBE4A-203ENST00000545354 TBC1D25Q3MII6 688 aa5.97□□□□□ -1.45
UBE4A-203ENST00000545354 ANKRD18AQ8IVF6 992 aa5.97□□□□□ -1.45
UBE4A-203ENST00000545354 RTF1Q92541 710 aaKnown RBP5.97□□□□□ -1.45
UBE4A-203ENST00000545354 MARVELD3Q96A59 401 aa5.97□□□□□ -1.45
UBE4A-203ENST00000545354 PANK2Q9BZ23 570 aa5.97□□□□□ -1.45
UBE4A-203ENST00000545354 LRRCC1Q9C099 1032 aa5.97□□□□□ -1.45
UBE4A-203ENST00000545354 ZSWIM6Q9HCJ5 1215 aa5.97□□□□□ -1.45
UBE4A-203ENST00000545354 TMEM63CQ9P1W3 806 aa5.97□□□□□ -1.45
UBE4A-203ENST00000545354 SLAIN2Q9P270 581 aa5.97□□□□□ -1.45
UBE4A-203ENST00000545354 LZTS1Q9Y250 596 aa5.97□□□□□ -1.45
UBE4A-203ENST00000545354 SPAG9O60271 1321 aaKnown RBP5.96□□□□□ -1.45
UBE4A-203ENST00000545354 A0A1B0GUA9 196 aa5.96□□□□□ -1.45
UBE4A-203ENST00000545354 RIMBP2O15034 1052 aa5.96□□□□□ -1.45
UBE4A-203ENST00000545354 NAT2P11245 290 aa5.96□□□□□ -1.45
UBE4A-203ENST00000545354 GCFC2P16383 781 aaKnown RBP5.96□□□□□ -1.45
UBE4A-203ENST00000545354 POU5F1BQ06416 359 aa5.96□□□□□ -1.45
UBE4A-203ENST00000545354 ZBTB17Q13105 803 aa5.96□□□□□ -1.45
UBE4A-203ENST00000545354 WTAPQ15007 396 aa5.96□□□□□ -1.45
UBE4A-203ENST00000545354 CEP135Q66GS9 1140 aa5.96□□□□□ -1.45
UBE4A-203ENST00000545354 DAAM2Q86T65 1068 aa5.96□□□□□ -1.45
UBE4A-203ENST00000545354 NOP9Q86U38 636 aaKnown RBP5.96□□□□□ -1.45
UBE4A-203ENST00000545354 TTC30AQ86WT1 665 aa5.96□□□□□ -1.45
UBE4A-203ENST00000545354 PEX5LQ8IYB4 626 aa5.96□□□□□ -1.45
UBE4A-203ENST00000545354 TAF4BQ92750 862 aa5.96□□□□□ -1.45
UBE4A-203ENST00000545354 TTC14Q96N46 770 aa5.96□□□□□ -1.45
UBE4A-203ENST00000545354 SH3GL1Q99961 368 aa5.96□□□□□ -1.45
UBE4A-203ENST00000545354 UTP14AQ9BVJ6 771 aaKnown RBP5.96□□□□□ -1.45
UBE4A-203ENST00000545354 RPAP3Q9H6T3 665 aaPredicted RBP5.96□□□□□ -1.45
UBE4A-203ENST00000545354 QTRT2Q9H974 415 aaKnown RBP5.96□□□□□ -1.45
UBE4A-203ENST00000545354 SEPT10Q9P0V9 454 aa5.96□□□□□ -1.45
UBE4A-203ENST00000545354 PCDH10Q9P2E7 1040 aa5.96□□□□□ -1.45
UBE4A-203ENST00000545354 ZMAT5Q9UDW3 170 aaKnown RBP5.96□□□□□ -1.45
UBE4A-203ENST00000545354 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.96□□□□□ -1.45
UBE4A-203ENST00000545354 CLASP1Q7Z460 1538 aa5.96□□□□□ -1.46
UBE4A-203ENST00000545354 TOPBP1Q92547 1522 aa5.96□□□□□ -1.46
UBE4A-203ENST00000545354 KDM4FA0A1W2PPD8 638 aa5.96□□□□□ -1.46
UBE4A-203ENST00000545354 KDM1AO60341 852 aa5.96□□□□□ -1.46
UBE4A-203ENST00000545354 RLBP1P12271 317 aa5.96□□□□□ -1.46
UBE4A-203ENST00000545354 TPP2P29144 1249 aaPredicted RBP5.96□□□□□ -1.46
UBE4A-203ENST00000545354 ZC3H6P61129 1189 aaKnown RBP5.96□□□□□ -1.46
UBE4A-203ENST00000545354 TPM4P67936 248 aa5.96□□□□□ -1.46
UBE4A-203ENST00000545354 KCTD2Q14681 263 aa5.96□□□□□ -1.46
UBE4A-203ENST00000545354 CCDC158Q5M9N0 1113 aa5.96□□□□□ -1.46
UBE4A-203ENST00000545354 FAAH2Q6GMR7 532 aa5.96□□□□□ -1.46
UBE4A-203ENST00000545354 GPR153Q6NV75 609 aa5.96□□□□□ -1.46
UBE4A-203ENST00000545354 CAVIN1Q6NZI2 390 aaKnown RBP5.96□□□□□ -1.46
UBE4A-203ENST00000545354 ERMNQ8TAM6 284 aa5.96□□□□□ -1.46
UBE4A-203ENST00000545354 VTI1AQ96AJ9 217 aa5.96□□□□□ -1.46
UBE4A-203ENST00000545354 ZBTB10Q96DT7 871 aa5.96□□□□□ -1.46
UBE4A-203ENST00000545354 MRRFQ96E11 262 aaKnown RBP5.96□□□□□ -1.46
UBE4A-203ENST00000545354 DTNBP1Q96EV8 351 aa5.96□□□□□ -1.46
UBE4A-203ENST00000545354 CDHR1Q96JP9 859 aa5.96□□□□□ -1.46
UBE4A-203ENST00000545354 GSDMAQ96QA5 445 aa5.96□□□□□ -1.46
UBE4A-203ENST00000545354 RPS6KC1Q96S38 1066 aa5.96□□□□□ -1.46
UBE4A-203ENST00000545354 STK31Q9BXU1 1019 aa5.96□□□□□ -1.46
UBE4A-203ENST00000545354 LRRC27Q9C0I9 530 aa5.96□□□□□ -1.46
UBE4A-203ENST00000545354 LUC7LQ9NQ29 371 aaKnown RBP5.96□□□□□ -1.46
UBE4A-203ENST00000545354 GABBR1Q9UBS5 961 aa5.96□□□□□ -1.46
UBE4A-203ENST00000545354 WDR37Q9Y2I8 494 aa5.96□□□□□ -1.46
UBE4A-203ENST00000545354 CCDC144AA2RUR9 1427 aa5.95□□□□□ -1.46
UBE4A-203ENST00000545354 ZSCAN9O15535 394 aaPredicted RBP5.95□□□□□ -1.46
UBE4A-203ENST00000545354 GIGYF1O75420 1035 aaPredicted RBP5.95□□□□□ -1.46
UBE4A-203ENST00000545354 HNRNPCP07910 306 aaKnown RBP eCLIP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms