RNA–Protein interactions for RNA: ENST00000543898.5

ABCB1-210, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5 BASIC

Gene ABCB1, Length 4,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-210ENST00000543898 PNPLA6Q8IY17 1366 aa9.98□□□□□ -0.81
ABCB1-210ENST00000543898 RALYLQ86SE5 291 aaKnown RBP9.98□□□□□ -0.81
ABCB1-210ENST00000543898 EDC3Q96F86 508 aaKnown RBP9.98□□□□□ -0.81
ABCB1-210ENST00000543898 TRIM34Q9BYJ4 488 aa9.98□□□□□ -0.81
ABCB1-210ENST00000543898 RPAP1Q9BWH6 1393 aaPredicted RBP9.98□□□□□ -0.81
ABCB1-210ENST00000543898 TTC41PQ6P2S7 1318 aa9.98□□□□□ -0.81
ABCB1-210ENST00000543898 LMAN1P49257 510 aa9.98□□□□□ -0.81
ABCB1-210ENST00000543898 CCDC144BQ3MJ40 725 aa9.98□□□□□ -0.81
ABCB1-210ENST00000543898 LEKR1Q6ZMV7 388 aa9.98□□□□□ -0.81
ABCB1-210ENST00000543898 CCDC144CPQ8IYA2 1237 aa9.98□□□□□ -0.81
ABCB1-210ENST00000543898 KLHDC4Q8TBB5 520 aa9.98□□□□□ -0.81
ABCB1-210ENST00000543898 ATP10DQ9P241 1426 aa9.98□□□□□ -0.81
ABCB1-210ENST00000543898 TET3O43151 1660 aa9.98□□□□□ -0.81
ABCB1-210ENST00000543898 USP27XA6NNY8 438 aa9.97□□□□□ -0.81
ABCB1-210ENST00000543898 GNG11P61952 73 aa9.97□□□□□ -0.81
ABCB1-210ENST00000543898 DDX46Q7L014 1031 aaKnown RBP9.97□□□□□ -0.81
ABCB1-210ENST00000543898 DDX41Q9UJV9 622 aaKnown RBP9.97□□□□□ -0.81
ABCB1-210ENST00000543898 EID1Q9Y6B2 187 aa9.97□□□□□ -0.81
ABCB1-210ENST00000543898 AOX1Q06278 1338 aa9.97□□□□□ -0.81
ABCB1-210ENST00000543898 MYCNP04198 464 aaPredicted RBP9.97□□□□□ -0.81
ABCB1-210ENST00000543898 TOP1P11387 765 aaKnown RBP9.97□□□□□ -0.81
ABCB1-210ENST00000543898 RPS6KB1P23443 525 aa9.97□□□□□ -0.81
ABCB1-210ENST00000543898 TRIM29Q14134 588 aa9.97□□□□□ -0.81
ABCB1-210ENST00000543898 CCDC129Q6ZRS4 1044 aa9.97□□□□□ -0.81
ABCB1-210ENST00000543898 CHMP4CQ96CF2 233 aa9.97□□□□□ -0.81
ABCB1-210ENST00000543898 QRICH2Q9H0J4 1663 aa9.97□□□□□ -0.81
ABCB1-210ENST00000543898 FBXO38Q6PIJ6 1188 aa9.97□□□□□ -0.81
ABCB1-210ENST00000543898 C11orf57Q6ZUT1 292 aaPredicted RBP9.97□□□□□ -0.81
ABCB1-210ENST00000543898 ANKRD7Q92527 254 aa9.97□□□□□ -0.81
ABCB1-210ENST00000543898 TTC14Q96N46 770 aa9.97□□□□□ -0.81
ABCB1-210ENST00000543898 POGZQ7Z3K3 1410 aa9.97□□□□□ -0.81
ABCB1-210ENST00000543898 APOBRQ0VD83 1088 aa9.97□□□□□ -0.81
ABCB1-210ENST00000543898 FTOQ9C0B1 505 aaKnown RBP eCLIP9.97□□□□□ -0.81
ABCB1-210ENST00000543898 TERF2Q15554 542 aa9.96□□□□□ -0.81
ABCB1-210ENST00000543898 CPLX2Q6PUV4 134 aaKnown RBP9.96□□□□□ -0.81
ABCB1-210ENST00000543898 PI4K2BQ8TCG2 481 aa9.96□□□□□ -0.81
ABCB1-210ENST00000543898 ST7Q9NRC1 585 aa9.96□□□□□ -0.81
ABCB1-210ENST00000543898 CASQ1P31415 396 aa9.96□□□□□ -0.81
ABCB1-210ENST00000543898 KMT5BQ4FZB7 885 aa9.96□□□□□ -0.81
ABCB1-210ENST00000543898 NFXL1Q6ZNB6 911 aa9.96□□□□□ -0.81
ABCB1-210ENST00000543898 TDRD7Q8NHU6 1098 aaKnown RBP9.96□□□□□ -0.81
ABCB1-210ENST00000543898 C8orf76Q96K31 380 aa9.96□□□□□ -0.81
ABCB1-210ENST00000543898 NCOA5Q9HCD5 579 aaKnown RBP9.96□□□□□ -0.81
ABCB1-210ENST00000543898 DBF4Q9UBU7 674 aaPredicted RBP9.96□□□□□ -0.81
ABCB1-210ENST00000543898 ZFYVE16Q7Z3T8 1539 aa9.96□□□□□ -0.81
ABCB1-210ENST00000543898 TULP4Q9NRJ4 1543 aa9.96□□□□□ -0.81
ABCB1-210ENST00000543898 EDC4Q6P2E9 1401 aaKnown RBP9.96□□□□□ -0.82
ABCB1-210ENST00000543898 CSB-PGBD3P0DP91 1061 aa9.96□□□□□ -0.82
ABCB1-210ENST00000543898 UBASH3AP57075 661 aa9.96□□□□□ -0.82
ABCB1-210ENST00000543898 TRDNQ13061 729 aa9.96□□□□□ -0.82
ABCB1-210ENST00000543898 OTUD7BQ6GQQ9 843 aa9.96□□□□□ -0.82
ABCB1-210ENST00000543898 CCDC150Q8NCX0 1101 aa9.96□□□□□ -0.82
ABCB1-210ENST00000543898 MRPS27Q92552 414 aaKnown RBP9.96□□□□□ -0.82
ABCB1-210ENST00000543898 UTP14AQ9BVJ6 771 aaKnown RBP9.96□□□□□ -0.82
ABCB1-210ENST00000543898 FKBP4Q02790 459 aaKnown RBP eCLIP9.95□□□□□ -0.82
ABCB1-210ENST00000543898 CPLX3Q8WVH0 158 aa9.95□□□□□ -0.82
ABCB1-210ENST00000543898 CCDC102AQ96A19 550 aa9.95□□□□□ -0.82
ABCB1-210ENST00000543898 CARD6Q9BX69 1037 aa9.95□□□□□ -0.82
ABCB1-210ENST00000543898 TM6SF1Q9BZW5 370 aa9.95□□□□□ -0.82
ABCB1-210ENST00000543898 HMG20BQ9P0W2 317 aa9.95□□□□□ -0.82
ABCB1-210ENST00000543898 A0A0D9SFI3 127 aa9.95□□□□□ -0.82
ABCB1-210ENST00000543898 MARCKSP29966 332 aaPredicted RBP9.95□□□□□ -0.82
ABCB1-210ENST00000543898 HAND2P61296 217 aa9.95□□□□□ -0.82
ABCB1-210ENST00000543898 MCM6Q14566 821 aa9.95□□□□□ -0.82
ABCB1-210ENST00000543898 C10orf67Q8IYJ2 551 aa9.95□□□□□ -0.82
ABCB1-210ENST00000543898 GPATCH11Q8N954 259 aa9.95□□□□□ -0.82
ABCB1-210ENST00000543898 ASXL2Q76L83 1435 aa9.95□□□□□ -0.82
ABCB1-210ENST00000543898 A0A0G2JS52 829 aa9.95□□□□□ -0.82
ABCB1-210ENST00000543898 PTPDC1A2A3K4 754 aa9.95□□□□□ -0.82
ABCB1-210ENST00000543898 NEK11Q8NG66 645 aa9.95□□□□□ -0.82
ABCB1-210ENST00000543898 U3KPZ7 1027 aaPredicted RBP9.95□□□□□ -0.82
ABCB1-210ENST00000543898 ZSCAN12O43309 604 aa9.95□□□□□ -0.82
ABCB1-210ENST00000543898 CBFA2T2O43439 604 aa9.95□□□□□ -0.82
ABCB1-210ENST00000543898 EPB41L2O43491 1005 aaKnown RBP9.95□□□□□ -0.82
ABCB1-210ENST00000543898 NOM1Q5C9Z4 860 aaKnown RBP9.95□□□□□ -0.82
ABCB1-210ENST00000543898 ZBTB12Q9Y330 459 aaPredicted RBP9.95□□□□□ -0.82
ABCB1-210ENST00000543898 SHROOM2Q13796 1616 aa9.95□□□□□ -0.82
ABCB1-210ENST00000543898 ZNF622Q969S3 477 aaKnown RBP eCLIP9.94□□□□□ -0.82
ABCB1-210ENST00000543898 XPO4Q9C0E2 1151 aaKnown RBP9.94□□□□□ -0.82
ABCB1-210ENST00000543898 SHPRHQ149N8 1683 aa9.94□□□□□ -0.82
ABCB1-210ENST00000543898 CTIFO43310 598 aaKnown RBP9.94□□□□□ -0.82
ABCB1-210ENST00000543898 DHX16O60231 1041 aaKnown RBP9.94□□□□□ -0.82
ABCB1-210ENST00000543898 FAM160A1Q05DH4 1040 aa9.94□□□□□ -0.82
ABCB1-210ENST00000543898 PLEKHO1Q53GL0 409 aaPredicted RBP9.94□□□□□ -0.82
ABCB1-210ENST00000543898 GOLIM4O00461 696 aa9.94□□□□□ -0.82
ABCB1-210ENST00000543898 TPM1P09493 284 aa9.94□□□□□ -0.82
ABCB1-210ENST00000543898 CALRP27797 417 aaKnown RBP9.94□□□□□ -0.82
ABCB1-210ENST00000543898 PTPN21Q16825 1174 aa9.94□□□□□ -0.82
ABCB1-210ENST00000543898 KRBA2Q6ZNG9 492 aa9.94□□□□□ -0.82
ABCB1-210ENST00000543898 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.94□□□□□ -0.82
ABCB1-210ENST00000543898 IL17REQ8NFR9 667 aa9.94□□□□□ -0.82
ABCB1-210ENST00000543898 MYD88Q99836 296 aa9.94□□□□□ -0.82
ABCB1-210ENST00000543898 ARFGAP3Q9NP61 516 aa9.94□□□□□ -0.82
ABCB1-210ENST00000543898 ERCC6L2Q5T890 1561 aa9.94□□□□□ -0.82
ABCB1-210ENST00000543898 EVCP57679 992 aa9.94□□□□□ -0.82
ABCB1-210ENST00000543898 PSME1Q06323 249 aa9.94□□□□□ -0.82
ABCB1-210ENST00000543898 USP28Q96RU2 1077 aa9.94□□□□□ -0.82
ABCB1-210ENST00000543898 HOOK1Q9UJC3 728 aaKnown RBP9.94□□□□□ -0.82
ABCB1-210ENST00000543898 CCDC191Q8NCU4 936 aa9.93□□□□□ -0.82
ABCB1-210ENST00000543898 PGBD1Q96JS3 809 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms