RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 ARHGEF25Q86VW2 580 aa6.26□□□□□ -1.41
ATPAF1-212ENST00000542495 TMEM121BQ9BXQ6 578 aaPredicted RBP6.26□□□□□ -1.41
ATPAF1-212ENST00000542495 TM6SF1Q9BZW5 370 aa6.26□□□□□ -1.41
ATPAF1-212ENST00000542495 LIMCH1Q9UPQ0 1083 aa6.26□□□□□ -1.41
ATPAF1-212ENST00000542495 TRPM3Q9HCF6 1732 aaPredicted RBP6.25□□□□□ -1.41
ATPAF1-212ENST00000542495 MRC1P22897 1456 aa6.25□□□□□ -1.41
ATPAF1-212ENST00000542495 MAP4K4O95819 1239 aaPredicted RBP6.25□□□□□ -1.41
ATPAF1-212ENST00000542495 TPM2P07951 284 aa6.25□□□□□ -1.41
ATPAF1-212ENST00000542495 AK2P54819 239 aa6.25□□□□□ -1.41
ATPAF1-212ENST00000542495 FOXD4L5Q5VV16 416 aaPredicted RBP6.25□□□□□ -1.41
ATPAF1-212ENST00000542495 ERC1Q8IUD2 1116 aa6.25□□□□□ -1.41
ATPAF1-212ENST00000542495 FOXD4L4Q8WXT5 416 aaPredicted RBP6.25□□□□□ -1.41
ATPAF1-212ENST00000542495 SYAP1Q96A49 352 aaPredicted RBP6.25□□□□□ -1.41
ATPAF1-212ENST00000542495 KRTAP3-3Q9BYR6 98 aa6.25□□□□□ -1.41
ATPAF1-212ENST00000542495 KRTAP3-2Q9BYR7 98 aa6.25□□□□□ -1.41
ATPAF1-212ENST00000542495 ECHDC1Q9NTX5 307 aa6.25□□□□□ -1.41
ATPAF1-212ENST00000542495 HYPKQ9NX55 129 aa6.25□□□□□ -1.41
ATPAF1-212ENST00000542495 RGS17Q9UGC6 210 aaPredicted RBP6.25□□□□□ -1.41
ATPAF1-212ENST00000542495 HDAC5Q9UQL6 1122 aa6.25□□□□□ -1.41
ATPAF1-212ENST00000542495 GRXCR2A6NFK2 248 aa6.24□□□□□ -1.41
ATPAF1-212ENST00000542495 GNPATO15228 680 aa6.24□□□□□ -1.41
ATPAF1-212ENST00000542495 GADD45BO75293 160 aaPredicted RBP6.24□□□□□ -1.41
ATPAF1-212ENST00000542495 GCP02774 474 aa6.24□□□□□ -1.41
ATPAF1-212ENST00000542495 ANXA1P04083 346 aa6.24□□□□□ -1.41
ATPAF1-212ENST00000542495 ZSCAN22P10073 491 aaPredicted RBP6.24□□□□□ -1.41
ATPAF1-212ENST00000542495 FECHP22830 423 aa6.24□□□□□ -1.41
ATPAF1-212ENST00000542495 PSME1Q06323 249 aa6.24□□□□□ -1.41
ATPAF1-212ENST00000542495 PROSER3Q2NL68 480 aa6.24□□□□□ -1.41
ATPAF1-212ENST00000542495 VPS53Q5VIR6 699 aa6.24□□□□□ -1.41
ATPAF1-212ENST00000542495 DPY19L2Q6NUT2 758 aa6.24□□□□□ -1.41
ATPAF1-212ENST00000542495 MPRIPQ6WCQ1 1025 aa6.24□□□□□ -1.41
ATPAF1-212ENST00000542495 NOL8Q76FK4 1167 aaKnown RBP6.24□□□□□ -1.41
ATPAF1-212ENST00000542495 USP48Q86UV5 1035 aa6.24□□□□□ -1.41
ATPAF1-212ENST00000542495 MICALL2Q8IY33 904 aa6.24□□□□□ -1.41
ATPAF1-212ENST00000542495 CLASRPQ8N2M8 674 aaKnown RBP6.24□□□□□ -1.41
ATPAF1-212ENST00000542495 LINS1Q8NG48 757 aa6.24□□□□□ -1.41
ATPAF1-212ENST00000542495 RUFY2Q8WXA3 655 aa6.24□□□□□ -1.41
ATPAF1-212ENST00000542495 LRRC59Q96AG4 307 aaKnown RBP6.24□□□□□ -1.41
ATPAF1-212ENST00000542495 KAZALD1Q96I82 304 aa6.24□□□□□ -1.41
ATPAF1-212ENST00000542495 TSPY26PQ9H489 355 aa6.24□□□□□ -1.41
ATPAF1-212ENST00000542495 ZSWIM6Q9HCJ5 1215 aa6.24□□□□□ -1.41
ATPAF1-212ENST00000542495 GOPCQ9HD26 462 aa6.24□□□□□ -1.41
ATPAF1-212ENST00000542495 MAP3K2Q9Y2U5 619 aa6.24□□□□□ -1.41
ATPAF1-212ENST00000542495 ROBO1Q9Y6N7 1651 aa6.24□□□□□ -1.41
ATPAF1-212ENST00000542495 PHF14O94880 888 aa6.23□□□□□ -1.41
ATPAF1-212ENST00000542495 SYT1P21579 422 aa6.23□□□□□ -1.41
ATPAF1-212ENST00000542495 OSBPP22059 807 aa6.23□□□□□ -1.41
ATPAF1-212ENST00000542495 MSNP26038 577 aaKnown RBP6.23□□□□□ -1.41
ATPAF1-212ENST00000542495 PTH1RQ03431 593 aa6.23□□□□□ -1.41
ATPAF1-212ENST00000542495 NECTIN1Q15223 517 aa6.23□□□□□ -1.41
ATPAF1-212ENST00000542495 UVSSAQ2YD98 709 aa6.23□□□□□ -1.41
ATPAF1-212ENST00000542495 CWC27Q6UX04 472 aaKnown RBP6.23□□□□□ -1.41
ATPAF1-212ENST00000542495 KIAA1211Q6ZU35 1233 aa6.23□□□□□ -1.41
ATPAF1-212ENST00000542495 EVI5LQ96CN4 794 aa6.23□□□□□ -1.41
ATPAF1-212ENST00000542495 ZKSCAN5Q9Y2L8 839 aa6.23□□□□□ -1.41
ATPAF1-212ENST00000542495 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.23□□□□□ -1.41
ATPAF1-212ENST00000542495 JCADQ9P266 1359 aa6.23□□□□□ -1.41
ATPAF1-212ENST00000542495 ABCC6O95255 1503 aa6.23□□□□□ -1.41
ATPAF1-212ENST00000542495 GRM8O00222 908 aa6.23□□□□□ -1.41
ATPAF1-212ENST00000542495 STX6O43752 255 aa6.23□□□□□ -1.41
ATPAF1-212ENST00000542495 SASH1O94885 1247 aa6.23□□□□□ -1.41
ATPAF1-212ENST00000542495 F13A1P00488 732 aa6.23□□□□□ -1.41
ATPAF1-212ENST00000542495 ST3GAL1Q11201 340 aa6.23□□□□□ -1.41
ATPAF1-212ENST00000542495 ESCO1Q5FWF5 840 aa6.23□□□□□ -1.41
ATPAF1-212ENST00000542495 C1orf141Q5JVX7 400 aa6.23□□□□□ -1.41
ATPAF1-212ENST00000542495 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.23□□□□□ -1.41
ATPAF1-212ENST00000542495 PLPP6Q8IY26 295 aa6.23□□□□□ -1.41
ATPAF1-212ENST00000542495 FAM184AQ8NB25 1140 aa6.23□□□□□ -1.41
ATPAF1-212ENST00000542495 TMC2Q8TDI7 906 aa6.23□□□□□ -1.41
ATPAF1-212ENST00000542495 ANKRD24Q8TF21 1146 aa6.23□□□□□ -1.41
ATPAF1-212ENST00000542495 RBM33Q96EV2 1170 aaKnown RBP6.23□□□□□ -1.41
ATPAF1-212ENST00000542495 GPATCH3Q96I76 525 aa6.23□□□□□ -1.41
ATPAF1-212ENST00000542495 ZSCAN31Q96LW9 406 aaPredicted RBP6.23□□□□□ -1.41
ATPAF1-212ENST00000542495 ALDH8A1Q9H2A2 487 aaPredicted RBP6.23□□□□□ -1.41
ATPAF1-212ENST00000542495 DDX21Q9NR30 783 aaKnown RBP eCLIP6.23□□□□□ -1.41
ATPAF1-212ENST00000542495 SH2B1Q9NRF2 756 aaPredicted RBP6.23□□□□□ -1.41
ATPAF1-212ENST00000542495 DIAPH3Q9NSV4 1193 aa6.23□□□□□ -1.41
ATPAF1-212ENST00000542495 C9orf78Q9NZ63 289 aaPredicted RBP6.23□□□□□ -1.41
ATPAF1-212ENST00000542495 SLAIN2Q9P270 581 aa6.23□□□□□ -1.41
ATPAF1-212ENST00000542495 CCDC39Q9UFE4 941 aa6.23□□□□□ -1.41
ATPAF1-212ENST00000542495 SPG7Q9UQ90 795 aa6.23□□□□□ -1.41
ATPAF1-212ENST00000542495 TCHHQ07283 1943 aa6.22□□□□□ -1.41
ATPAF1-212ENST00000542495 COL15A1P39059 1388 aa6.22□□□□□ -1.41
ATPAF1-212ENST00000542495 PLEKHG2Q9H7P9 1386 aa6.22□□□□□ -1.41
ATPAF1-212ENST00000542495 CCDC171Q6TFL3 1326 aa6.22□□□□□ -1.41
ATPAF1-212ENST00000542495 POTEB3A0JP26 581 aa6.22□□□□□ -1.41
ATPAF1-212ENST00000542495 HIP1O00291 1037 aa6.22□□□□□ -1.41
ATPAF1-212ENST00000542495 RRP9O43818 475 aaKnown RBP6.22□□□□□ -1.41
ATPAF1-212ENST00000542495 LETM1O95202 739 aaPredicted RBP6.22□□□□□ -1.41
ATPAF1-212ENST00000542495 LARGE1O95461 756 aa6.22□□□□□ -1.41
ATPAF1-212ENST00000542495 IFIT2P09913 472 aaKnown RBP6.22□□□□□ -1.41
ATPAF1-212ENST00000542495 CASTP20810 708 aaKnown RBP6.22□□□□□ -1.41
ATPAF1-212ENST00000542495 UBE2HP62256 183 aa6.22□□□□□ -1.41
ATPAF1-212ENST00000542495 OS9Q13438 667 aaPredicted RBP6.22□□□□□ -1.41
ATPAF1-212ENST00000542495 HIC1Q14526 733 aa6.22□□□□□ -1.41
ATPAF1-212ENST00000542495 CWF19L2Q2TBE0 894 aaKnown RBP6.22□□□□□ -1.41
ATPAF1-212ENST00000542495 ADCK5Q3MIX3 580 aa6.22□□□□□ -1.41
ATPAF1-212ENST00000542495 CCDC183Q5T5S1 534 aa6.22□□□□□ -1.41
ATPAF1-212ENST00000542495 POTEBQ6S5H4 581 aa6.22□□□□□ -1.41
ATPAF1-212ENST00000542495 UBE2Q2Q8WVN8 375 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms