RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 PKN2Q16513 984 aaKnown RBP3.6□□□□□ -1.83
TRAV1-1-201ENST00000542354 PTCRAQ6ISU1 281 aaPredicted RBP3.6□□□□□ -1.83
TRAV1-1-201ENST00000542354 LARP1Q6PKG0 1096 aaKnown RBP3.6□□□□□ -1.83
TRAV1-1-201ENST00000542354 LYPD8Q6UX82 237 aa3.6□□□□□ -1.83
TRAV1-1-201ENST00000542354 COL23A1Q86Y22 540 aaPredicted RBP3.6□□□□□ -1.83
TRAV1-1-201ENST00000542354 LINC00528Q8N1L1 170 aa3.6□□□□□ -1.83
TRAV1-1-201ENST00000542354 HELBQ8NG08 1087 aaPredicted RBP3.6□□□□□ -1.83
TRAV1-1-201ENST00000542354 ENAMQ9NRM1 1142 aa3.6□□□□□ -1.83
TRAV1-1-201ENST00000542354 MAP4K5Q9Y4K4 846 aa3.6□□□□□ -1.83
TRAV1-1-201ENST00000542354 CEP152O94986 1710 aa3.6□□□□□ -1.83
TRAV1-1-201ENST00000542354 XRN1Q8IZH2 1706 aaKnown RBP3.6□□□□□ -1.83
TRAV1-1-201ENST00000542354 SBF2Q86WG5 1849 aa3.6□□□□□ -1.83
TRAV1-1-201ENST00000542354 METP08581 1390 aa3.6□□□□□ -1.83
TRAV1-1-201ENST00000542354 ATP7BP35670 1465 aa3.6□□□□□ -1.83
TRAV1-1-201ENST00000542354 CCDC18Q5T9S5 1454 aa3.6□□□□□ -1.83
TRAV1-1-201ENST00000542354 MARSP56192 900 aaKnown RBP3.59□□□□□ -1.83
TRAV1-1-201ENST00000542354 GUCA2AQ02747 115 aa3.59□□□□□ -1.83
TRAV1-1-201ENST00000542354 MAP3K10Q02779 954 aa3.59□□□□□ -1.83
TRAV1-1-201ENST00000542354 DHX9Q08211 1270 aaKnown RBP3.59□□□□□ -1.83
TRAV1-1-201ENST00000542354 CHRNA2Q15822 529 aa3.59□□□□□ -1.83
TRAV1-1-201ENST00000542354 CTU1Q7Z7A3 348 aaKnown RBP3.59□□□□□ -1.83
TRAV1-1-201ENST00000542354 MEIOBQ8N635 442 aa3.59□□□□□ -1.83
TRAV1-1-201ENST00000542354 MARCH10Q8NA82 808 aaPredicted RBP3.59□□□□□ -1.83
TRAV1-1-201ENST00000542354 SPIRE2Q8WWL2 714 aa3.59□□□□□ -1.83
TRAV1-1-201ENST00000542354 HLA-CQ95604 372 aa3.59□□□□□ -1.83
TRAV1-1-201ENST00000542354 SCARF2Q96GP6 870 aaPredicted RBP3.59□□□□□ -1.83
TRAV1-1-201ENST00000542354 PRR36Q9H6K5 1346 aa3.59□□□□□ -1.83
TRAV1-1-201ENST00000542354 KANK1Q14678 1352 aa3.59□□□□□ -1.83
TRAV1-1-201ENST00000542354 CCNB3Q8WWL7 1395 aa3.59□□□□□ -1.83
TRAV1-1-201ENST00000542354 LMTK2Q8IWU2 1503 aa3.59□□□□□ -1.84
TRAV1-1-201ENST00000542354 LRRIQ1Q96JM4 1722 aa3.58□□□□□ -1.84
TRAV1-1-201ENST00000542354 CACNA1BQ00975 2339 aa3.58□□□□□ -1.84
TRAV1-1-201ENST00000542354 A0A0G2JLW4 131 aa3.58□□□□□ -1.84
TRAV1-1-201ENST00000542354 H0YGN5 161 aa3.58□□□□□ -1.84
TRAV1-1-201ENST00000542354 PPFIA3O75145 1194 aa3.58□□□□□ -1.84
TRAV1-1-201ENST00000542354 BRPF1P55201 1214 aaPredicted RBP3.58□□□□□ -1.84
TRAV1-1-201ENST00000542354 AMHR2Q16671 573 aa3.58□□□□□ -1.84
TRAV1-1-201ENST00000542354 C6orf118Q5T5N4 469 aa3.58□□□□□ -1.84
TRAV1-1-201ENST00000542354 CYP4F22Q6NT55 531 aa3.58□□□□□ -1.84
TRAV1-1-201ENST00000542354 VASH1Q7L8A9 365 aaPredicted RBP3.58□□□□□ -1.84
TRAV1-1-201ENST00000542354 LDHDQ86WU2 507 aa3.58□□□□□ -1.84
TRAV1-1-201ENST00000542354 VSIG10Q8N0Z9 540 aa3.58□□□□□ -1.84
TRAV1-1-201ENST00000542354 DEFB123Q8N688 67 aa3.58□□□□□ -1.84
TRAV1-1-201ENST00000542354 FLAD1Q8NFF5 587 aa3.58□□□□□ -1.84
TRAV1-1-201ENST00000542354 HCN4Q9Y3Q4 1203 aa3.58□□□□□ -1.84
TRAV1-1-201ENST00000542354 DNMT3AQ9Y6K1 912 aaPredicted RBP3.58□□□□□ -1.84
TRAV1-1-201ENST00000542354 ANKRD30BQ9BXX2 1392 aa3.58□□□□□ -1.84
TRAV1-1-201ENST00000542354 USP6P35125 1406 aa3.58□□□□□ -1.84
TRAV1-1-201ENST00000542354 SPATA31E1Q6ZUB1 1445 aa3.58□□□□□ -1.84
TRAV1-1-201ENST00000542354 PEAK1Q9H792 1746 aa3.58□□□□□ -1.84
TRAV1-1-201ENST00000542354 ATRXP46100 2492 aa3.58□□□□□ -1.84
TRAV1-1-201ENST00000542354 TTLL8A6PVC2 850 aa3.57□□□□□ -1.84
TRAV1-1-201ENST00000542354 TRANK1O15050 2925 aa3.57□□□□□ -1.84
TRAV1-1-201ENST00000542354 HMGB2P26583 209 aaKnown RBP3.57□□□□□ -1.84
TRAV1-1-201ENST00000542354 RASSF7Q02833 373 aa3.57□□□□□ -1.84
TRAV1-1-201ENST00000542354 PAPPAQ13219 1627 aa3.57□□□□□ -1.84
TRAV1-1-201ENST00000542354 SUZ12Q15022 739 aaKnown RBP3.57□□□□□ -1.84
TRAV1-1-201ENST00000542354 QSER1Q2KHR3 1735 aa3.57□□□□□ -1.84
TRAV1-1-201ENST00000542354 FOXR1Q6PIV2 292 aa3.57□□□□□ -1.84
TRAV1-1-201ENST00000542354 PODNQ7Z5L7 613 aa3.57□□□□□ -1.84
TRAV1-1-201ENST00000542354 TRMT44Q8IYL2 757 aaKnown RBP3.57□□□□□ -1.84
TRAV1-1-201ENST00000542354 CCDC116Q8IYX3 515 aa3.57□□□□□ -1.84
TRAV1-1-201ENST00000542354 SVOPQ8N4V2 548 aa3.57□□□□□ -1.84
TRAV1-1-201ENST00000542354 CDCA7Q9BWT1 371 aaPredicted RBP3.57□□□□□ -1.84
TRAV1-1-201ENST00000542354 PCDHGC3Q9UN70 934 aa3.57□□□□□ -1.84
TRAV1-1-201ENST00000542354 MKI67P46013 3256 aaKnown RBP3.56□□□□□ -1.84
TRAV1-1-201ENST00000542354 RANBP2P49792 3224 aaKnown RBP3.56□□□□□ -1.84
TRAV1-1-201ENST00000542354 KIAA0232Q92628 1395 aa3.56□□□□□ -1.84
TRAV1-1-201ENST00000542354 ROBO2Q9HCK4 1378 aa3.56□□□□□ -1.84
TRAV1-1-201ENST00000542354 MOXD2PA6NHM9 499 aa3.56□□□□□ -1.84
TRAV1-1-201ENST00000542354 PHF20L1A8MW92 1017 aa3.56□□□□□ -1.84
TRAV1-1-201ENST00000542354 EXOC5O00471 708 aa3.56□□□□□ -1.84
TRAV1-1-201ENST00000542354 AOC2O75106 756 aa3.56□□□□□ -1.84
TRAV1-1-201ENST00000542354 LMNB1P20700 586 aa3.56□□□□□ -1.84
TRAV1-1-201ENST00000542354 FSHRP23945 695 aa3.56□□□□□ -1.84
TRAV1-1-201ENST00000542354 ZC3H6P61129 1189 aaKnown RBP3.56□□□□□ -1.84
TRAV1-1-201ENST00000542354 KCTD2Q14681 263 aa3.56□□□□□ -1.84
TRAV1-1-201ENST00000542354 MAP3K11Q16584 847 aa3.56□□□□□ -1.84
TRAV1-1-201ENST00000542354 AKAP4Q5JQC9 854 aa3.56□□□□□ -1.84
TRAV1-1-201ENST00000542354 LCE2CQ5TA81 110 aa3.56□□□□□ -1.84
TRAV1-1-201ENST00000542354 RSBN1LQ6PCB5 846 aaPredicted RBP3.56□□□□□ -1.84
TRAV1-1-201ENST00000542354 GIGYF2Q6Y7W6 1299 aaKnown RBP3.56□□□□□ -1.84
TRAV1-1-201ENST00000542354 SV2AQ7L0J3 742 aa3.56□□□□□ -1.84
TRAV1-1-201ENST00000542354 KCTD17Q8N5Z5 321 aa3.56□□□□□ -1.84
TRAV1-1-201ENST00000542354 NANOS1Q8WY41 292 aaKnown RBP3.56□□□□□ -1.84
TRAV1-1-201ENST00000542354 ITPKCQ96DU7 683 aa3.56□□□□□ -1.84
TRAV1-1-201ENST00000542354 SLC10A4Q96EP9 437 aa3.56□□□□□ -1.84
TRAV1-1-201ENST00000542354 GMCL1Q96IK5 515 aa3.56□□□□□ -1.84
TRAV1-1-201ENST00000542354 RSPH6AQ9H0K4 717 aa3.56□□□□□ -1.84
TRAV1-1-201ENST00000542354 SPTBN5Q9NRC6 3674 aaKnown RBP3.56□□□□□ -1.84
TRAV1-1-201ENST00000542354 PKD1L3Q7Z443 1732 aa3.56□□□□□ -1.84
TRAV1-1-201ENST00000542354 PARP4Q9UKK3 1724 aaKnown RBP3.56□□□□□ -1.84
TRAV1-1-201ENST00000542354 CCDC141Q6ZP82 1450 aa3.55□□□□□ -1.84
TRAV1-1-201ENST00000542354 ERBINQ96RT1 1412 aa3.55□□□□□ -1.84
TRAV1-1-201ENST00000542354 LOC100996750A0A140TA64 210 aa3.55□□□□□ -1.84
TRAV1-1-201ENST00000542354 A0A1W2PPC1 479 aa3.55□□□□□ -1.84
TRAV1-1-201ENST00000542354 IQCA1LA6NCM1 817 aa3.55□□□□□ -1.84
TRAV1-1-201ENST00000542354 NDUFV2P19404 249 aa3.55□□□□□ -1.84
TRAV1-1-201ENST00000542354 TUSC1Q2TAM9 212 aa3.55□□□□□ -1.84
TRAV1-1-201ENST00000542354 DALRD3Q5D0E6 543 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms