RNA–Protein interactions for RNA: ENST00000541421.2

SMLR1-201, Transcript of small leucine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMLR1, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMLR1-201ENST00000541421 PLBD2Q8NHP8 589 aa12.37□□□□□ -0.43
SMLR1-201ENST00000541421 ALDH8A1Q9H2A2 487 aaPredicted RBP12.37□□□□□ -0.43
SMLR1-201ENST00000541421 DBNLQ9UJU6 430 aaKnown RBP12.37□□□□□ -0.43
SMLR1-201ENST00000541421 RFX7Q2KHR2 1363 aa12.37□□□□□ -0.43
SMLR1-201ENST00000541421 A0A087WZG4 1122 aa12.37□□□□□ -0.43
SMLR1-201ENST00000541421 FIBPO43427 364 aa12.37□□□□□ -0.43
SMLR1-201ENST00000541421 PIP4K2AP48426 406 aaPredicted RBP12.37□□□□□ -0.43
SMLR1-201ENST00000541421 TFCP2Q12800 502 aa12.37□□□□□ -0.43
SMLR1-201ENST00000541421 DDX54Q8TDD1 881 aaKnown RBP12.37□□□□□ -0.43
SMLR1-201ENST00000541421 CCDC39Q9UFE4 941 aa12.37□□□□□ -0.43
SMLR1-201ENST00000541421 CPDO75976 1380 aa12.37□□□□□ -0.43
SMLR1-201ENST00000541421 NHSL1Q5SYE7 1610 aa12.37□□□□□ -0.43
SMLR1-201ENST00000541421 ARFGEF2Q9Y6D5 1785 aa12.36□□□□□ -0.43
SMLR1-201ENST00000541421 RPS6KB1P23443 525 aa12.36□□□□□ -0.43
SMLR1-201ENST00000541421 AFDNP55196 1824 aaKnown RBP12.36□□□□□ -0.43
SMLR1-201ENST00000541421 ZNF589Q86UQ0 364 aaPredicted RBP12.36□□□□□ -0.43
SMLR1-201ENST00000541421 NECAB1Q8N987 351 aa12.36□□□□□ -0.43
SMLR1-201ENST00000541421 VPS37CA5D8V6 355 aaPredicted RBP12.36□□□□□ -0.43
SMLR1-201ENST00000541421 TAF5LO75529 589 aa12.36□□□□□ -0.43
SMLR1-201ENST00000541421 MCM5P33992 734 aa12.36□□□□□ -0.43
SMLR1-201ENST00000541421 UVSSAQ2YD98 709 aa12.36□□□□□ -0.43
SMLR1-201ENST00000541421 USPL1Q5W0Q7 1092 aa12.36□□□□□ -0.43
SMLR1-201ENST00000541421 JARID2Q92833 1246 aaPredicted RBP12.36□□□□□ -0.43
SMLR1-201ENST00000541421 ZKSCAN5Q9Y2L8 839 aa12.36□□□□□ -0.43
SMLR1-201ENST00000541421 LAMB4A4D0S4 1761 aa12.35□□□□□ -0.43
SMLR1-201ENST00000541421 SPATA31A3Q5VYP0 1347 aa12.35□□□□□ -0.43
SMLR1-201ENST00000541421 ATP5J2-PTCD1G3V325 749 aa12.35□□□□□ -0.43
SMLR1-201ENST00000541421 ZNF500O60304 480 aaPredicted RBP12.35□□□□□ -0.43
SMLR1-201ENST00000541421 PTCD1O75127 700 aaKnown RBP12.35□□□□□ -0.43
SMLR1-201ENST00000541421 PDCP20941 246 aa12.35□□□□□ -0.43
SMLR1-201ENST00000541421 CASP7P55210 303 aa12.35□□□□□ -0.43
SMLR1-201ENST00000541421 DNM1Q05193 864 aaKnown RBP12.35□□□□□ -0.43
SMLR1-201ENST00000541421 KRT32Q14532 448 aa12.35□□□□□ -0.43
SMLR1-201ENST00000541421 EDC3Q96F86 508 aaKnown RBP12.35□□□□□ -0.43
SMLR1-201ENST00000541421 PARP4Q9UKK3 1724 aaKnown RBP12.35□□□□□ -0.43
SMLR1-201ENST00000541421 OFD1O75665 1012 aa12.35□□□□□ -0.43
SMLR1-201ENST00000541421 LARP1BQ659C4 914 aaKnown RBP12.35□□□□□ -0.43
SMLR1-201ENST00000541421 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.35□□□□□ -0.43
SMLR1-201ENST00000541421 GLI3P10071 1580 aa12.34□□□□□ -0.43
SMLR1-201ENST00000541421 PIP4K2BP78356 416 aa12.34□□□□□ -0.43
SMLR1-201ENST00000541421 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.34□□□□□ -0.43
SMLR1-201ENST00000541421 COL9A3Q14050 684 aaPredicted RBP12.34□□□□□ -0.43
SMLR1-201ENST00000541421 TOB2Q14106 344 aaPredicted RBP12.34□□□□□ -0.43
SMLR1-201ENST00000541421 HAUS7Q99871 368 aa12.34□□□□□ -0.43
SMLR1-201ENST00000541421 DBNDD2Q9BQY9 259 aa12.34□□□□□ -0.43
SMLR1-201ENST00000541421 TAF6LQ9Y6J9 622 aa12.34□□□□□ -0.43
SMLR1-201ENST00000541421 AHDC1Q5TGY3 1603 aaPredicted RBP12.33□□□□□ -0.44
SMLR1-201ENST00000541421 LMBR1LQ6UX01 489 aa12.33□□□□□ -0.44
SMLR1-201ENST00000541421 H7C1W4 665 aa12.33□□□□□ -0.44
SMLR1-201ENST00000541421 DTNBO60941 627 aa12.33□□□□□ -0.44
SMLR1-201ENST00000541421 TCEANC2Q96MN5 208 aa12.33□□□□□ -0.44
SMLR1-201ENST00000541421 DNAJC2Q99543 621 aaKnown RBP12.33□□□□□ -0.44
SMLR1-201ENST00000541421 U3KPZ7 1027 aaPredicted RBP12.33□□□□□ -0.44
SMLR1-201ENST00000541421 KRT85P78386 507 aa12.32□□□□□ -0.44
SMLR1-201ENST00000541421 ZNF609O15014 1411 aa12.32□□□□□ -0.44
SMLR1-201ENST00000541421 PCDH11XQ9BZA7 1347 aa12.32□□□□□ -0.44
SMLR1-201ENST00000541421 PCDH11YQ9BZA8 1340 aa12.32□□□□□ -0.44
SMLR1-201ENST00000541421 NBPF26B4DH59 902 aa12.32□□□□□ -0.44
SMLR1-201ENST00000541421 TPM2P07951 284 aa12.32□□□□□ -0.44
SMLR1-201ENST00000541421 FOXO4P98177 505 aa12.32□□□□□ -0.44
SMLR1-201ENST00000541421 MCMDC2Q4G0Z9 681 aa12.32□□□□□ -0.44
SMLR1-201ENST00000541421 NBPF14Q5TI25 921 aa12.32□□□□□ -0.44
SMLR1-201ENST00000541421 NBPF10Q6P3W6 841 aaKnown RBP12.32□□□□□ -0.44
SMLR1-201ENST00000541421 CDC37L1Q7L3B6 337 aa12.32□□□□□ -0.44
SMLR1-201ENST00000541421 NBPF15Q8N660 670 aa12.32□□□□□ -0.44
SMLR1-201ENST00000541421 PTMAP06454 111 aaKnown RBP12.31□□□□□ -0.44
SMLR1-201ENST00000541421 TPRNQ4KMQ1 711 aa12.31□□□□□ -0.44
SMLR1-201ENST00000541421 NEK1Q96PY6 1258 aa12.31□□□□□ -0.44
SMLR1-201ENST00000541421 CWC25Q9NXE8 425 aaPredicted RBP12.31□□□□□ -0.44
SMLR1-201ENST00000541421 ELP1O95163 1332 aa12.31□□□□□ -0.44
SMLR1-201ENST00000541421 HCLS1P14317 486 aaPredicted RBP12.31□□□□□ -0.44
SMLR1-201ENST00000541421 TICAM2Q86XR7 235 aa12.31□□□□□ -0.44
SMLR1-201ENST00000541421 KBTBD3Q8NAB2 608 aa12.31□□□□□ -0.44
SMLR1-201ENST00000541421 ZCRB1Q8TBF4 217 aaKnown RBP12.31□□□□□ -0.44
SMLR1-201ENST00000541421 GPR108Q9NPR9 543 aa12.31□□□□□ -0.44
SMLR1-201ENST00000541421 NDUFB9Q9Y6M9 179 aa12.31□□□□□ -0.44
SMLR1-201ENST00000541421 WDR17Q8IZU2 1322 aa12.3□□□□□ -0.44
SMLR1-201ENST00000541421 ERVV-2B6SEH9 535 aa12.3□□□□□ -0.44
SMLR1-201ENST00000541421 DDX46Q7L014 1031 aaKnown RBP12.3□□□□□ -0.44
SMLR1-201ENST00000541421 FUCA2Q9BTY2 467 aa12.3□□□□□ -0.44
SMLR1-201ENST00000541421 CHMP3Q9Y3E7 222 aa12.3□□□□□ -0.44
SMLR1-201ENST00000541421 PALLDQ8WX93 1383 aa12.3□□□□□ -0.44
SMLR1-201ENST00000541421 SH3TC1Q8TE82 1336 aa12.3□□□□□ -0.44
SMLR1-201ENST00000541421 TERF1P54274 439 aa12.3□□□□□ -0.44
SMLR1-201ENST00000541421 ATG9AQ7Z3C6 839 aa12.3□□□□□ -0.44
SMLR1-201ENST00000541421 CYP21A2P08686 494 aa12.29□□□□□ -0.44
SMLR1-201ENST00000541421 STK3Q13188 491 aa12.29□□□□□ -0.44
SMLR1-201ENST00000541421 GIMAP6Q6P9H5 292 aa12.29□□□□□ -0.44
SMLR1-201ENST00000541421 CCDC129Q6ZRS4 1044 aa12.29□□□□□ -0.44
SMLR1-201ENST00000541421 TTLL7Q6ZT98 887 aa12.29□□□□□ -0.44
SMLR1-201ENST00000541421 TTC6Q86TZ1 520 aa12.29□□□□□ -0.44
SMLR1-201ENST00000541421 FERMT3Q86UX7 667 aa12.29□□□□□ -0.44
SMLR1-201ENST00000541421 GTF3C6Q969F1 213 aa12.29□□□□□ -0.44
SMLR1-201ENST00000541421 SEC62Q99442 399 aaKnown RBP12.29□□□□□ -0.44
SMLR1-201ENST00000541421 SCAND2PQ9GZW5 306 aaPredicted RBP12.29□□□□□ -0.44
SMLR1-201ENST00000541421 USP25Q9UHP3 1055 aa12.29□□□□□ -0.44
SMLR1-201ENST00000541421 COL16A1Q07092 1604 aaPredicted RBP12.29□□□□□ -0.44
SMLR1-201ENST00000541421 UBR2Q8IWV8 1755 aa12.29□□□□□ -0.44
SMLR1-201ENST00000541421 IL15P40933 162 aaPredicted RBP12.29□□□□□ -0.44
SMLR1-201ENST00000541421 TOM1L2Q6ZVM7 507 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms