RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 ASAP1Q9ULH1 1129 aa8.45□□□□□ -1.06
CLTCL1-206ENST00000540896 ADAMTS7Q9UKP4 1686 aa8.45□□□□□ -1.06
CLTCL1-206ENST00000540896 BTAF1O14981 1849 aa8.45□□□□□ -1.06
CLTCL1-206ENST00000540896 VIRMAQ69YN4 1812 aaKnown RBP8.45□□□□□ -1.06
CLTCL1-206ENST00000540896 TNS1Q9HBL0 1735 aaKnown RBP8.44□□□□□ -1.06
CLTCL1-206ENST00000540896 MLLT3P42568 568 aaPredicted RBP8.44□□□□□ -1.06
CLTCL1-206ENST00000540896 APLP1P51693 650 aa8.44□□□□□ -1.06
CLTCL1-206ENST00000540896 SMARCC1Q92922 1105 aaPredicted RBP8.44□□□□□ -1.06
CLTCL1-206ENST00000540896 CLUAP1Q96AJ1 413 aa8.44□□□□□ -1.06
CLTCL1-206ENST00000540896 CAMKK2Q96RR4 588 aa8.44□□□□□ -1.06
CLTCL1-206ENST00000540896 ATG3Q9NT62 314 aa8.44□□□□□ -1.06
CLTCL1-206ENST00000540896 V9GY48 417 aaPredicted RBP8.44□□□□□ -1.06
CLTCL1-206ENST00000540896 PRAMEF22A3QJZ6 481 aa8.43□□□□□ -1.06
CLTCL1-206ENST00000540896 DNAJB2P25686 324 aa8.43□□□□□ -1.06
CLTCL1-206ENST00000540896 PTGDRQ13258 359 aa8.43□□□□□ -1.06
CLTCL1-206ENST00000540896 PDE3AQ14432 1141 aa8.43□□□□□ -1.06
CLTCL1-206ENST00000540896 EZH2Q15910 746 aaKnown RBP8.43□□□□□ -1.06
CLTCL1-206ENST00000540896 C20orf194Q5TEA3 1177 aa8.43□□□□□ -1.06
CLTCL1-206ENST00000540896 ATF7IPQ6VMQ6 1270 aa8.43□□□□□ -1.06
CLTCL1-206ENST00000540896 DZIP1LQ8IYY4 767 aaKnown RBP8.43□□□□□ -1.06
CLTCL1-206ENST00000540896 VSIG10Q8N0Z9 540 aa8.43□□□□□ -1.06
CLTCL1-206ENST00000540896 PANK1Q8TE04 598 aa8.43□□□□□ -1.06
CLTCL1-206ENST00000540896 ARHGAP45Q92619 1136 aa8.43□□□□□ -1.06
CLTCL1-206ENST00000540896 TEX13AQ9BXU3 409 aaPredicted RBP8.43□□□□□ -1.06
CLTCL1-206ENST00000540896 API5Q9BZZ5 524 aaKnown RBP8.43□□□□□ -1.06
CLTCL1-206ENST00000540896 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.43□□□□□ -1.06
CLTCL1-206ENST00000540896 CHPF2Q9P2E5 772 aa8.43□□□□□ -1.06
CLTCL1-206ENST00000540896 DBF4Q9UBU7 674 aaPredicted RBP8.43□□□□□ -1.06
CLTCL1-206ENST00000540896 USP16Q9Y5T5 823 aa8.43□□□□□ -1.06
CLTCL1-206ENST00000540896 HEG1Q9ULI3 1381 aa8.43□□□□□ -1.06
CLTCL1-206ENST00000540896 MRC1P22897 1456 aa8.43□□□□□ -1.06
CLTCL1-206ENST00000540896 STARD3NLO95772 234 aa8.42□□□□□ -1.06
CLTCL1-206ENST00000540896 MYL6BP14649 208 aa8.42□□□□□ -1.06
CLTCL1-206ENST00000540896 BRPF1P55201 1214 aaPredicted RBP8.42□□□□□ -1.06
CLTCL1-206ENST00000540896 FKBP5Q13451 457 aaPredicted RBP8.42□□□□□ -1.06
CLTCL1-206ENST00000540896 TXNRD1Q16881 649 aa8.42□□□□□ -1.06
CLTCL1-206ENST00000540896 ERICH6BQ5W0A0 696 aa8.42□□□□□ -1.06
CLTCL1-206ENST00000540896 PPP1R18Q6NYC8 613 aa8.42□□□□□ -1.06
CLTCL1-206ENST00000540896 Q6ZNB5 142 aa8.42□□□□□ -1.06
CLTCL1-206ENST00000540896 EXOC6Q8TAG9 804 aa8.42□□□□□ -1.06
CLTCL1-206ENST00000540896 CRBNQ96SW2 442 aa8.42□□□□□ -1.06
CLTCL1-206ENST00000540896 HYPKQ9NX55 129 aa8.42□□□□□ -1.06
CLTCL1-206ENST00000540896 COG6Q9Y2V7 657 aa8.42□□□□□ -1.06
CLTCL1-206ENST00000540896 PALLDQ8WX93 1383 aa8.42□□□□□ -1.06
CLTCL1-206ENST00000540896 SIPA1L3O60292 1781 aaPredicted RBP8.41□□□□□ -1.06
CLTCL1-206ENST00000540896 PTPRCP08575 1304 aa8.41□□□□□ -1.06
CLTCL1-206ENST00000540896 LOC102724428A0A0B4J2F2 783 aa8.41□□□□□ -1.06
CLTCL1-206ENST00000540896 ANXA1P04083 346 aa8.41□□□□□ -1.06
CLTCL1-206ENST00000540896 TRIM27P14373 513 aa8.41□□□□□ -1.06
CLTCL1-206ENST00000540896 ATP6V1AP38606 617 aa8.41□□□□□ -1.06
CLTCL1-206ENST00000540896 KCNQ4P56696 695 aa8.41□□□□□ -1.06
CLTCL1-206ENST00000540896 SIK1P57059 783 aa8.41□□□□□ -1.06
CLTCL1-206ENST00000540896 FLIIQ13045 1269 aa8.41□□□□□ -1.06
CLTCL1-206ENST00000540896 SLC27A3Q5K4L6 730 aa8.41□□□□□ -1.06
CLTCL1-206ENST00000540896 SLC4A10Q6U841 1118 aa8.41□□□□□ -1.06
CLTCL1-206ENST00000540896 G2E3Q7L622 706 aa8.41□□□□□ -1.06
CLTCL1-206ENST00000540896 NPM2Q86SE8 214 aaKnown RBP8.41□□□□□ -1.06
CLTCL1-206ENST00000540896 ITPRIPQ8IWB1 547 aa8.41□□□□□ -1.06
CLTCL1-206ENST00000540896 ARXQ96QS3 562 aa8.41□□□□□ -1.06
CLTCL1-206ENST00000540896 TMUB1Q9BVT8 246 aa8.41□□□□□ -1.06
CLTCL1-206ENST00000540896 PRKD2Q9BZL6 878 aa8.41□□□□□ -1.06
CLTCL1-206ENST00000540896 DDX21Q9NR30 783 aaKnown RBP eCLIP8.41□□□□□ -1.06
CLTCL1-206ENST00000540896 CCNL1Q9UK58 526 aaPredicted RBP8.41□□□□□ -1.06
CLTCL1-206ENST00000540896 TNNQ9UQP3 1299 aa8.41□□□□□ -1.06
CLTCL1-206ENST00000540896 DDX58O95786 925 aaKnown RBP8.4□□□□□ -1.06
CLTCL1-206ENST00000540896 A1BGP04217 495 aa8.4□□□□□ -1.06
CLTCL1-206ENST00000540896 AIMP1Q12904 312 aaKnown RBP8.4□□□□□ -1.06
CLTCL1-206ENST00000540896 SMYD5Q6GMV2 418 aa8.4□□□□□ -1.06
CLTCL1-206ENST00000540896 DNAJC10Q8IXB1 793 aa8.4□□□□□ -1.06
CLTCL1-206ENST00000540896 ZNF516Q92618 1163 aa8.4□□□□□ -1.06
CLTCL1-206ENST00000540896 PHAXQ9H814 394 aaKnown RBP8.4□□□□□ -1.06
CLTCL1-206ENST00000540896 LRRC4BQ9NT99 713 aa8.4□□□□□ -1.06
CLTCL1-206ENST00000540896 ZNF330Q9Y3S2 320 aaPredicted RBP8.4□□□□□ -1.06
CLTCL1-206ENST00000540896 RLBP1P12271 317 aa8.39□□□□□ -1.07
CLTCL1-206ENST00000540896 PIP4K2AP48426 406 aaPredicted RBP8.39□□□□□ -1.07
CLTCL1-206ENST00000540896 PROSER3Q2NL68 480 aa8.39□□□□□ -1.07
CLTCL1-206ENST00000540896 RIC3Q7Z5B4 369 aa8.39□□□□□ -1.07
CLTCL1-206ENST00000540896 TMEM57Q8N5G2 664 aa8.39□□□□□ -1.07
CLTCL1-206ENST00000540896 SLC4A9Q96Q91 983 aa8.39□□□□□ -1.07
CLTCL1-206ENST00000540896 CHMP4BQ9H444 224 aaKnown RBP8.39□□□□□ -1.07
CLTCL1-206ENST00000540896 PPP4R2Q9NY27 417 aa8.39□□□□□ -1.07
CLTCL1-206ENST00000540896 RGPD3A6NKT7 1758 aaPredicted RBP8.39□□□□□ -1.07
CLTCL1-206ENST00000540896 KDM3BQ7LBC6 1761 aa8.39□□□□□ -1.07
CLTCL1-206ENST00000540896 RGPD4Q7Z3J3 1758 aa8.39□□□□□ -1.07
CLTCL1-206ENST00000540896 LY75O60449 1722 aa8.39□□□□□ -1.07
CLTCL1-206ENST00000540896 ERBB4Q15303 1308 aa8.38□□□□□ -1.07
CLTCL1-206ENST00000540896 F6X3S4 739 aa8.38□□□□□ -1.07
CLTCL1-206ENST00000540896 GFRA3O60609 400 aa8.38□□□□□ -1.07
CLTCL1-206ENST00000540896 OATP04181 439 aa8.38□□□□□ -1.07
CLTCL1-206ENST00000540896 HMGB2P26583 209 aaKnown RBP8.38□□□□□ -1.07
CLTCL1-206ENST00000540896 CCT4P50991 539 aaKnown RBP8.38□□□□□ -1.07
CLTCL1-206ENST00000540896 ITPK1Q13572 414 aa8.38□□□□□ -1.07
CLTCL1-206ENST00000540896 MVPQ14764 893 aaKnown RBP8.38□□□□□ -1.07
CLTCL1-206ENST00000540896 KMT5BQ4FZB7 885 aa8.38□□□□□ -1.07
CLTCL1-206ENST00000540896 COPS6Q7L5N1 327 aa8.38□□□□□ -1.07
CLTCL1-206ENST00000540896 XAGE3Q8WTP9 111 aa8.38□□□□□ -1.07
CLTCL1-206ENST00000540896 CCDC136Q96JN2 1154 aa8.38□□□□□ -1.07
CLTCL1-206ENST00000540896 TMEM134Q9H6X4 195 aa8.38□□□□□ -1.07
CLTCL1-206ENST00000540896 DDX19BQ9UMR2 479 aa8.38□□□□□ -1.07
CLTCL1-206ENST00000540896 PCDHB3Q9Y5E6 796 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms