RNA–Protein interactions for RNA: ENST00000540768.5

NUP85-203, Transcript of nucleoporin 85, humanhuman

TSL 2 BASIC

Gene NUP85, Length 1,926 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-203ENST00000540768 PRIM1P49642 420 aaKnown RBP11.9□□□□□ -0.5
NUP85-203ENST00000540768 TNNI3KQ59H18 835 aa11.9□□□□□ -0.5
NUP85-203ENST00000540768 CREB3L3Q68CJ9 461 aa11.9□□□□□ -0.5
NUP85-203ENST00000540768 UBE3BQ7Z3V4 1068 aa11.9□□□□□ -0.5
NUP85-203ENST00000540768 LARP6Q9BRS8 491 aaKnown RBP11.9□□□□□ -0.5
NUP85-203ENST00000540768 RBSNQ9H1K0 784 aa11.9□□□□□ -0.5
NUP85-203ENST00000540768 PDRG1Q9NUG6 133 aa11.9□□□□□ -0.5
NUP85-203ENST00000540768 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.9□□□□□ -0.5
NUP85-203ENST00000540768 FPGT-TNNI3KV9GXZ4 949 aa11.9□□□□□ -0.5
NUP85-203ENST00000540768 SPATA31A5Q5VU36 1347 aa11.9□□□□□ -0.5
NUP85-203ENST00000540768 SPATA31A7Q8IWB4 1347 aa11.9□□□□□ -0.5
NUP85-203ENST00000540768 PCDH11XQ9BZA7 1347 aa11.9□□□□□ -0.5
NUP85-203ENST00000540768 PCDH11YQ9BZA8 1340 aa11.9□□□□□ -0.5
NUP85-203ENST00000540768 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.9□□□□□ -0.51
NUP85-203ENST00000540768 A0A087WZG4 1122 aa11.9□□□□□ -0.51
NUP85-203ENST00000540768 ERVV-2B6SEH9 535 aa11.9□□□□□ -0.51
NUP85-203ENST00000540768 ATP5JP18859 108 aa11.9□□□□□ -0.51
NUP85-203ENST00000540768 CCDC173Q0VFZ6 552 aa11.9□□□□□ -0.51
NUP85-203ENST00000540768 TFCP2Q12800 502 aa11.9□□□□□ -0.51
NUP85-203ENST00000540768 NKX1-1Q15270 411 aaPredicted RBP11.9□□□□□ -0.51
NUP85-203ENST00000540768 ZCRB1Q8TBF4 217 aaKnown RBP11.9□□□□□ -0.51
NUP85-203ENST00000540768 FSD1Q9BTV5 496 aa11.9□□□□□ -0.51
NUP85-203ENST00000540768 DBNLQ9UJU6 430 aaKnown RBP11.9□□□□□ -0.51
NUP85-203ENST00000540768 COL5A2P05997 1499 aaPredicted RBP11.89□□□□□ -0.51
NUP85-203ENST00000540768 PAPPAQ13219 1627 aa11.89□□□□□ -0.51
NUP85-203ENST00000540768 KCPQ6ZWJ8 1503 aa11.89□□□□□ -0.51
NUP85-203ENST00000540768 H7C1W4 665 aa11.89□□□□□ -0.51
NUP85-203ENST00000540768 SLC27A2O14975 620 aa11.89□□□□□ -0.51
NUP85-203ENST00000540768 ST3GAL1Q11201 340 aa11.89□□□□□ -0.51
NUP85-203ENST00000540768 TMEM87AQ8NBN3 555 aa11.89□□□□□ -0.51
NUP85-203ENST00000540768 ZSCAN31Q96LW9 406 aaPredicted RBP11.89□□□□□ -0.51
NUP85-203ENST00000540768 STRN4Q9NRL3 753 aa11.89□□□□□ -0.51
NUP85-203ENST00000540768 CYP46A1Q9Y6A2 500 aa11.89□□□□□ -0.51
NUP85-203ENST00000540768 ZSCAN22P10073 491 aaPredicted RBP11.88□□□□□ -0.51
NUP85-203ENST00000540768 ZKSCAN1P17029 563 aaPredicted RBP11.88□□□□□ -0.51
NUP85-203ENST00000540768 SYT1P21579 422 aa11.88□□□□□ -0.51
NUP85-203ENST00000540768 CLCN1P35523 988 aa11.88□□□□□ -0.51
NUP85-203ENST00000540768 BAG6P46379 1132 aa11.88□□□□□ -0.51
NUP85-203ENST00000540768 FOXO4P98177 505 aa11.88□□□□□ -0.51
NUP85-203ENST00000540768 LRSAM1Q6UWE0 723 aa11.88□□□□□ -0.51
NUP85-203ENST00000540768 SH2B1Q9NRF2 756 aaPredicted RBP11.88□□□□□ -0.51
NUP85-203ENST00000540768 NUP188Q5SRE5 1749 aa11.88□□□□□ -0.51
NUP85-203ENST00000540768 STX6O43752 255 aa11.88□□□□□ -0.51
NUP85-203ENST00000540768 EVA1CP58658 441 aa11.88□□□□□ -0.51
NUP85-203ENST00000540768 TOM1L2Q6ZVM7 507 aa11.88□□□□□ -0.51
NUP85-203ENST00000540768 USP48Q86UV5 1035 aa11.88□□□□□ -0.51
NUP85-203ENST00000540768 EDC3Q96F86 508 aaKnown RBP11.88□□□□□ -0.51
NUP85-203ENST00000540768 SMC3Q9UQE7 1217 aa11.88□□□□□ -0.51
NUP85-203ENST00000540768 SHANK3Q9BYB0 1731 aa11.87□□□□□ -0.51
NUP85-203ENST00000540768 SYCE3A1L190 88 aa11.87□□□□□ -0.51
NUP85-203ENST00000540768 ESPNB1AK53 854 aa11.87□□□□□ -0.51
NUP85-203ENST00000540768 GADD45BO75293 160 aaPredicted RBP11.87□□□□□ -0.51
NUP85-203ENST00000540768 COL9A3Q14050 684 aaPredicted RBP11.87□□□□□ -0.51
NUP85-203ENST00000540768 ME3Q16798 604 aa11.87□□□□□ -0.51
NUP85-203ENST00000540768 TSGA10IPQ3SY00 556 aa11.87□□□□□ -0.51
NUP85-203ENST00000540768 TTLL7Q6ZT98 887 aa11.87□□□□□ -0.51
NUP85-203ENST00000540768 ZNF589Q86UQ0 364 aaPredicted RBP11.87□□□□□ -0.51
NUP85-203ENST00000540768 ALDH8A1Q9H2A2 487 aaPredicted RBP11.87□□□□□ -0.51
NUP85-203ENST00000540768 RFX7Q2KHR2 1363 aa11.87□□□□□ -0.51
NUP85-203ENST00000540768 TNS2Q63HR2 1409 aa11.86□□□□□ -0.51
NUP85-203ENST00000540768 TAF5LO75529 589 aa11.86□□□□□ -0.51
NUP85-203ENST00000540768 PSMA5P28066 241 aa11.86□□□□□ -0.51
NUP85-203ENST00000540768 USPL1Q5W0Q7 1092 aa11.86□□□□□ -0.51
NUP85-203ENST00000540768 LMBR1LQ6UX01 489 aa11.86□□□□□ -0.51
NUP85-203ENST00000540768 CCDC83Q8IWF9 413 aa11.86□□□□□ -0.51
NUP85-203ENST00000540768 CARD10Q9BWT7 1032 aa11.86□□□□□ -0.51
NUP85-203ENST00000540768 GDPD2Q9HCC8 539 aa11.86□□□□□ -0.51
NUP85-203ENST00000540768 TJP1Q07157 1748 aa11.86□□□□□ -0.51
NUP85-203ENST00000540768 SPATA31A1Q5TZJ5 1347 aa11.86□□□□□ -0.51
NUP85-203ENST00000540768 ABCA3Q99758 1704 aa11.86□□□□□ -0.51
NUP85-203ENST00000540768 F13A1P00488 732 aa11.86□□□□□ -0.51
NUP85-203ENST00000540768 A1BGP04217 495 aa11.86□□□□□ -0.51
NUP85-203ENST00000540768 IL2RBP14784 551 aa11.86□□□□□ -0.51
NUP85-203ENST00000540768 GJB2P29033 226 aa11.86□□□□□ -0.51
NUP85-203ENST00000540768 KCNJ4P48050 445 aa11.86□□□□□ -0.51
NUP85-203ENST00000540768 EN1Q05925 392 aaPredicted RBP11.86□□□□□ -0.51
NUP85-203ENST00000540768 FOXD4L6Q3SYB3 417 aaPredicted RBP11.86□□□□□ -0.51
NUP85-203ENST00000540768 FOXD4L3Q6VB84 417 aaPredicted RBP11.86□□□□□ -0.51
NUP85-203ENST00000540768 DDX54Q8TDD1 881 aaKnown RBP11.86□□□□□ -0.51
NUP85-203ENST00000540768 TRIM44Q96DX7 344 aaPredicted RBP11.86□□□□□ -0.51
NUP85-203ENST00000540768 HAUS7Q99871 368 aa11.86□□□□□ -0.51
NUP85-203ENST00000540768 DBNDD2Q9BQY9 259 aa11.86□□□□□ -0.51
NUP85-203ENST00000540768 TPCN1Q9ULQ1 816 aa11.86□□□□□ -0.51
NUP85-203ENST00000540768 PSDA5PKW4 1024 aaPredicted RBP11.85□□□□□ -0.51
NUP85-203ENST00000540768 RNF20Q5VTR2 975 aa11.85□□□□□ -0.51
NUP85-203ENST00000540768 ATG9AQ7Z3C6 839 aa11.85□□□□□ -0.51
NUP85-203ENST00000540768 CWC25Q9NXE8 425 aaPredicted RBP11.85□□□□□ -0.51
NUP85-203ENST00000540768 HMG20BQ9P0W2 317 aa11.85□□□□□ -0.51
NUP85-203ENST00000540768 MTMR6Q9Y217 621 aa11.85□□□□□ -0.51
NUP85-203ENST00000540768 TAF6LQ9Y6J9 622 aa11.85□□□□□ -0.51
NUP85-203ENST00000540768 TCHHQ07283 1943 aa11.85□□□□□ -0.51
NUP85-203ENST00000540768 PLCH1Q4KWH8 1693 aa11.85□□□□□ -0.51
NUP85-203ENST00000540768 RPS6KB1P23443 525 aa11.84□□□□□ -0.51
NUP85-203ENST00000540768 ANP32BQ92688 251 aaKnown RBP11.84□□□□□ -0.51
NUP85-203ENST00000540768 PDLIM2Q96JY6 352 aa11.84□□□□□ -0.51
NUP85-203ENST00000540768 CNPY2Q9Y2B0 182 aa11.84□□□□□ -0.51
NUP85-203ENST00000540768 NWD2Q9ULI1 1742 aa11.84□□□□□ -0.51
NUP85-203ENST00000540768 ZNF609O15014 1411 aa11.84□□□□□ -0.51
NUP85-203ENST00000540768 CCDC191Q8NCU4 936 aa11.84□□□□□ -0.51
NUP85-203ENST00000540768 SYAP1Q96A49 352 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms