RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 NAT10Q9H0A0 1025 aaKnown RBP6.91□□□□□ -1.3
CHD4-206ENST00000536999 TNNQ9UQP3 1299 aa6.91□□□□□ -1.3
CHD4-206ENST00000536999 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.91□□□□□ -1.3
CHD4-206ENST00000536999 CCDC61Q9Y6R9 512 aa6.91□□□□□ -1.3
CHD4-206ENST00000536999 MINK1Q8N4C8 1332 aaPredicted RBP6.91□□□□□ -1.3
CHD4-206ENST00000536999 CTIFO43310 598 aaKnown RBP6.9□□□□□ -1.3
CHD4-206ENST00000536999 STX6O43752 255 aa6.9□□□□□ -1.3
CHD4-206ENST00000536999 CDC25BP30305 580 aa6.9□□□□□ -1.3
CHD4-206ENST00000536999 HSPA4P34932 840 aa6.9□□□□□ -1.3
CHD4-206ENST00000536999 RGS19P49795 217 aa6.9□□□□□ -1.3
CHD4-206ENST00000536999 KCNQ4P56696 695 aa6.9□□□□□ -1.3
CHD4-206ENST00000536999 GSDMDP57764 484 aa6.9□□□□□ -1.3
CHD4-206ENST00000536999 TPM4P67936 248 aa6.9□□□□□ -1.3
CHD4-206ENST00000536999 RBM10P98175 930 aaKnown RBP6.9□□□□□ -1.3
CHD4-206ENST00000536999 ATP8B2P98198 1209 aa6.9□□□□□ -1.3
CHD4-206ENST00000536999 KRT32Q14532 448 aa6.9□□□□□ -1.3
CHD4-206ENST00000536999 VPS53Q5VIR6 699 aa6.9□□□□□ -1.3
CHD4-206ENST00000536999 POTEHQ6S545 545 aa6.9□□□□□ -1.3
CHD4-206ENST00000536999 USP48Q86UV5 1035 aa6.9□□□□□ -1.3
CHD4-206ENST00000536999 COL23A1Q86Y22 540 aaPredicted RBP6.9□□□□□ -1.3
CHD4-206ENST00000536999 RGS22Q8NE09 1264 aa6.9□□□□□ -1.3
CHD4-206ENST00000536999 KIAA1524Q8TCG1 905 aa6.9□□□□□ -1.3
CHD4-206ENST00000536999 KIF1BPQ96EK5 621 aa6.9□□□□□ -1.3
CHD4-206ENST00000536999 ALDH8A1Q9H2A2 487 aaPredicted RBP6.9□□□□□ -1.3
CHD4-206ENST00000536999 RRAGCQ9HB90 399 aa6.9□□□□□ -1.3
CHD4-206ENST00000536999 ANO2Q9NQ90 1003 aa6.9□□□□□ -1.3
CHD4-206ENST00000536999 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.9□□□□□ -1.3
CHD4-206ENST00000536999 PRDM4Q9UKN5 801 aa6.9□□□□□ -1.3
CHD4-206ENST00000536999 CFAP45Q9UL16 551 aa6.9□□□□□ -1.3
CHD4-206ENST00000536999 TTC41PQ6P2S7 1318 aa6.9□□□□□ -1.3
CHD4-206ENST00000536999 WDR17Q8IZU2 1322 aa6.9□□□□□ -1.3
CHD4-206ENST00000536999 PLEKHG2Q9H7P9 1386 aa6.9□□□□□ -1.31
CHD4-206ENST00000536999 TRIM6-TRIM34B2RNG4 842 aa6.89□□□□□ -1.31
CHD4-206ENST00000536999 ATP8B1O43520 1251 aa6.89□□□□□ -1.31
CHD4-206ENST00000536999 GLRX3O76003 335 aaKnown RBP6.89□□□□□ -1.31
CHD4-206ENST00000536999 CD2BP2O95400 341 aaKnown RBP6.89□□□□□ -1.31
CHD4-206ENST00000536999 HOXB7P09629 217 aa6.89□□□□□ -1.31
CHD4-206ENST00000536999 CHMLP26374 656 aa6.89□□□□□ -1.31
CHD4-206ENST00000536999 MAP3K11Q16584 847 aa6.89□□□□□ -1.31
CHD4-206ENST00000536999 SLFNL1Q499Z3 407 aa6.89□□□□□ -1.31
CHD4-206ENST00000536999 TEX35Q5T0J7 233 aa6.89□□□□□ -1.31
CHD4-206ENST00000536999 ARHGAP27Q6ZUM4 889 aa6.89□□□□□ -1.31
CHD4-206ENST00000536999 CCDC112Q8NEF3 446 aa6.89□□□□□ -1.31
CHD4-206ENST00000536999 SRRTQ9BXP5 876 aaKnown RBP6.89□□□□□ -1.31
CHD4-206ENST00000536999 ZSCAN16Q9H4T2 348 aaPredicted RBP6.89□□□□□ -1.31
CHD4-206ENST00000536999 CABP1Q9NZU7 370 aa6.89□□□□□ -1.31
CHD4-206ENST00000536999 CALCOCO1Q9P1Z2 691 aa6.89□□□□□ -1.31
CHD4-206ENST00000536999 MKRN1Q9UHC7 482 aaKnown RBP6.89□□□□□ -1.31
CHD4-206ENST00000536999 BTAF1O14981 1849 aa6.88□□□□□ -1.31
CHD4-206ENST00000536999 CICQ96RK0 1608 aaPredicted RBP6.88□□□□□ -1.31
CHD4-206ENST00000536999 KCPQ6ZWJ8 1503 aa6.88□□□□□ -1.31
CHD4-206ENST00000536999 PXDNLA1KZ92 1463 aa6.88□□□□□ -1.31
CHD4-206ENST00000536999 RAD50Q92878 1312 aa6.88□□□□□ -1.31
CHD4-206ENST00000536999 GOLGA6L19H0YKK7 550 aa6.88□□□□□ -1.31
CHD4-206ENST00000536999 WASLO00401 505 aaPredicted RBP6.88□□□□□ -1.31
CHD4-206ENST00000536999 MYO1BO43795 1136 aa6.88□□□□□ -1.31
CHD4-206ENST00000536999 LBX1P52954 281 aa6.88□□□□□ -1.31
CHD4-206ENST00000536999 GPS2Q13227 327 aa6.88□□□□□ -1.31
CHD4-206ENST00000536999 C9orf131Q5VYM1 1079 aa6.88□□□□□ -1.31
CHD4-206ENST00000536999 ANKRD7Q92527 254 aa6.88□□□□□ -1.31
CHD4-206ENST00000536999 CARD10Q9BWT7 1032 aa6.88□□□□□ -1.31
CHD4-206ENST00000536999 KCND1Q9NSA2 647 aa6.88□□□□□ -1.31
CHD4-206ENST00000536999 ARGLU1Q9NWB6 273 aaPredicted RBP6.88□□□□□ -1.31
CHD4-206ENST00000536999 HMG20BQ9P0W2 317 aa6.88□□□□□ -1.31
CHD4-206ENST00000536999 BCS1LQ9Y276 419 aa6.88□□□□□ -1.31
CHD4-206ENST00000536999 ZDHHC9Q9Y397 364 aa6.88□□□□□ -1.31
CHD4-206ENST00000536999 CYP46A1Q9Y6A2 500 aa6.88□□□□□ -1.31
CHD4-206ENST00000536999 KAT6BQ8WYB5 2073 aa6.88□□□□□ -1.31
CHD4-206ENST00000536999 TUBGCP6Q96RT7 1819 aa6.87□□□□□ -1.31
CHD4-206ENST00000536999 WNK3Q9BYP7 1800 aa6.87□□□□□ -1.31
CHD4-206ENST00000536999 C10orf71Q711Q0 1435 aa6.87□□□□□ -1.31
CHD4-206ENST00000536999 F13A1P00488 732 aa6.87□□□□□ -1.31
CHD4-206ENST00000536999 ZSCAN20P17040 1043 aaPredicted RBP6.87□□□□□ -1.31
CHD4-206ENST00000536999 KCNJ6P48051 423 aa6.87□□□□□ -1.31
CHD4-206ENST00000536999 ZRSR1Q15695 479 aaKnown RBP6.87□□□□□ -1.31
CHD4-206ENST00000536999 PPP4R3BQ5MIZ7 849 aa6.87□□□□□ -1.31
CHD4-206ENST00000536999 CHRDL2Q6WN34 429 aa6.87□□□□□ -1.31
CHD4-206ENST00000536999 ZGPATQ8N5A5 531 aaKnown RBP6.87□□□□□ -1.31
CHD4-206ENST00000536999 C8orf58Q8NAV2 365 aa6.87□□□□□ -1.31
CHD4-206ENST00000536999 NUP62CLQ9H1M0 184 aa6.87□□□□□ -1.31
CHD4-206ENST00000536999 IMPACTQ9P2X3 320 aa6.87□□□□□ -1.31
CHD4-206ENST00000536999 CCNL1Q9UK58 526 aaPredicted RBP6.87□□□□□ -1.31
CHD4-206ENST00000536999 CLEC11AQ9Y240 323 aa6.87□□□□□ -1.31
CHD4-206ENST00000536999 V9GYY5 206 aaPredicted RBP6.87□□□□□ -1.31
CHD4-206ENST00000536999 TUBBP07437 444 aa6.86□□□□□ -1.31
CHD4-206ENST00000536999 HMGB1P09429 215 aaKnown RBP6.86□□□□□ -1.31
CHD4-206ENST00000536999 UBTFL1P0CB47 393 aaPredicted RBP6.86□□□□□ -1.31
CHD4-206ENST00000536999 CDK11BP21127 795 aaKnown RBP6.86□□□□□ -1.31
CHD4-206ENST00000536999 SLC20A2Q08357 652 aa6.86□□□□□ -1.31
CHD4-206ENST00000536999 BMS1Q14692 1282 aaKnown RBP6.86□□□□□ -1.31
CHD4-206ENST00000536999 SARM1Q6SZW1 724 aa6.86□□□□□ -1.31
CHD4-206ENST00000536999 DRC7Q8IY82 874 aa6.86□□□□□ -1.31
CHD4-206ENST00000536999 KRT222Q8N1A0 295 aa6.86□□□□□ -1.31
CHD4-206ENST00000536999 RNF214Q8ND24 703 aa6.86□□□□□ -1.31
CHD4-206ENST00000536999 KIF18AQ8NI77 898 aa6.86□□□□□ -1.31
CHD4-206ENST00000536999 RILPL2Q969X0 211 aa6.86□□□□□ -1.31
CHD4-206ENST00000536999 SYTL4Q96C24 671 aaPredicted RBP6.86□□□□□ -1.31
CHD4-206ENST00000536999 NUDT16Q96DE0 195 aaKnown RBP6.86□□□□□ -1.31
CHD4-206ENST00000536999 PODXL2Q9NZ53 605 aa6.86□□□□□ -1.31
CHD4-206ENST00000536999 ABCC6O95255 1503 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms