RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 PSMA5P28066 241 aa21.34■■□□□ 1.01
RAB40C-203ENST00000535977 RUFY3Q7L099 469 aa21.34■■□□□ 1.01
RAB40C-203ENST00000535977 TMEM87AQ8NBN3 555 aa21.34■■□□□ 1.01
RAB40C-203ENST00000535977 MYD88Q99836 296 aa21.34■■□□□ 1.01
RAB40C-203ENST00000535977 PDRG1Q9NUG6 133 aa21.34■■□□□ 1.01
RAB40C-203ENST00000535977 ANKRD7Q92527 254 aa21.33■■□□□ 1.01
RAB40C-203ENST00000535977 SPTLC3Q9NUV7 552 aa21.33■■□□□ 1.01
RAB40C-203ENST00000535977 SMC3Q9UQE7 1217 aa21.33■■□□□ 1.01
RAB40C-203ENST00000535977 PTH1RQ03431 593 aa21.33■■□□□ 1
RAB40C-203ENST00000535977 MAP4K1Q92918 833 aa21.33■■□□□ 1
RAB40C-203ENST00000535977 RNF20Q5VTR2 975 aa21.32■■□□□ 1
RAB40C-203ENST00000535977 CDK11BP21127 795 aaKnown RBP21.32■■□□□ 1
RAB40C-203ENST00000535977 PRPF40BQ6NWY9 871 aaKnown RBP21.32■■□□□ 1
RAB40C-203ENST00000535977 LRP10Q7Z4F1 713 aa21.32■■□□□ 1
RAB40C-203ENST00000535977 PKD1L3Q7Z443 1732 aa21.31■■□□□ 1
RAB40C-203ENST00000535977 ZSCAN22P10073 491 aaPredicted RBP21.31■■□□□ 1
RAB40C-203ENST00000535977 JAKMIP1Q96N16 626 aaKnown RBP21.31■■□□□ 1
RAB40C-203ENST00000535977 CABP4P57796 275 aa21.31■■□□□ 1
RAB40C-203ENST00000535977 CCDC8Q9H0W5 538 aaPredicted RBP21.31■■□□□ 1
RAB40C-203ENST00000535977 TAF7LQ5H9L4 462 aa21.3■■□□□ 1
RAB40C-203ENST00000535977 STRCP1A6NGW2 1772 aa21.3■■□□□ 1
RAB40C-203ENST00000535977 SPATA31A3Q5VYP0 1347 aa21.3■■□□□ 1
RAB40C-203ENST00000535977 RIOK3O14730 519 aaKnown RBP21.3■■□□□ 1
RAB40C-203ENST00000535977 CYP27B1O15528 508 aa21.3■■□□□ 1
RAB40C-203ENST00000535977 STX6O43752 255 aa21.3■■□□□ 1
RAB40C-203ENST00000535977 RABL6Q3YEC7 729 aaPredicted RBP21.3■■□□□ 1
RAB40C-203ENST00000535977 RBM8AQ9Y5S9 174 aaKnown RBP21.3■■□□□ 1
RAB40C-203ENST00000535977 USP16Q9Y5T5 823 aa21.3■■□□□ 1
RAB40C-203ENST00000535977 RPAP1Q9BWH6 1393 aaPredicted RBP21.3■■□□□ 1
RAB40C-203ENST00000535977 KCNJ4P48050 445 aa21.29■■□□□ 1
RAB40C-203ENST00000535977 ANKRD1Q15327 319 aa21.29■■□□□ 1
RAB40C-203ENST00000535977 PLBD2Q8NHP8 589 aa21.29■■□□□ 1
RAB40C-203ENST00000535977 FEZ1Q99689 392 aa21.29■■□□□ 1
RAB40C-203ENST00000535977 ALDH8A1Q9H2A2 487 aaPredicted RBP21.29■■□□□ 1
RAB40C-203ENST00000535977 IRX5P78411 483 aaPredicted RBP21.28■■□□□ 1
RAB40C-203ENST00000535977 NMIQ13287 307 aaPredicted RBP21.28■■□□□ 1
RAB40C-203ENST00000535977 CREB3L3Q68CJ9 461 aa21.28■■□□□ 1
RAB40C-203ENST00000535977 FSD1Q9BTV5 496 aa21.28■■□□□ 1
RAB40C-203ENST00000535977 HMG20BQ9P0W2 317 aa21.28■■□□□ 1
RAB40C-203ENST00000535977 USP25Q9UHP3 1055 aa21.28■■□□□ 1
RAB40C-203ENST00000535977 RFX7Q2KHR2 1363 aa21.28■■□□□ 1
RAB40C-203ENST00000535977 ATP5JP18859 108 aa21.28■■□□□ 1
RAB40C-203ENST00000535977 OGFRQ9NZT2 677 aa21.28■■□□□ 1
RAB40C-203ENST00000535977 SYT1P21579 422 aa21.28■■□□□ 1
RAB40C-203ENST00000535977 USP48Q86UV5 1035 aa21.28■■□□□ 1
RAB40C-203ENST00000535977 TICAM2Q86XR7 235 aa21.28■■□□□ 1
RAB40C-203ENST00000535977 SIL1Q9H173 461 aa21.28■■□□□ 1
RAB40C-203ENST00000535977 BOLA2Q9H3K6 86 aa21.27■■□□□ 1
RAB40C-203ENST00000535977 TSGA10IPQ3SY00 556 aa21.27■□□□□ 0.99
RAB40C-203ENST00000535977 PARP4Q9UKK3 1724 aaKnown RBP21.26■□□□□ 0.99
RAB40C-203ENST00000535977 F13A1P00488 732 aa21.26■□□□□ 0.99
RAB40C-203ENST00000535977 RFX5P48382 616 aaPredicted RBP21.26■□□□□ 0.99
RAB40C-203ENST00000535977 ADCK5Q3MIX3 580 aa21.26■□□□□ 0.99
RAB40C-203ENST00000535977 EPHA10Q5JZY3 1008 aa21.26■□□□□ 0.99
RAB40C-203ENST00000535977 FAM227BQ96M60 508 aa21.26■□□□□ 0.99
RAB40C-203ENST00000535977 SLC27A2O14975 620 aa21.25■□□□□ 0.99
RAB40C-203ENST00000535977 ADCY5O95622 1261 aa21.25■□□□□ 0.99
RAB40C-203ENST00000535977 PTPN12Q05209 780 aaKnown RBP21.25■□□□□ 0.99
RAB40C-203ENST00000535977 MED23Q9ULK4 1368 aa21.25■□□□□ 0.99
RAB40C-203ENST00000535977 CTIFO43310 598 aaKnown RBP21.24■□□□□ 0.99
RAB40C-203ENST00000535977 CHRNA2Q15822 529 aa21.24■□□□□ 0.99
RAB40C-203ENST00000535977 TNNI3KQ59H18 835 aa21.24■□□□□ 0.99
RAB40C-203ENST00000535977 DDX17Q92841 729 aaKnown RBP21.24■□□□□ 0.99
RAB40C-203ENST00000535977 TLR7Q9NYK1 1049 aaKnown RBP21.24■□□□□ 0.99
RAB40C-203ENST00000535977 FPGT-TNNI3KV9GXZ4 949 aa21.24■□□□□ 0.99
RAB40C-203ENST00000535977 JCADQ9P266 1359 aa21.24■□□□□ 0.99
RAB40C-203ENST00000535977 UBE2HP62256 183 aa21.24■□□□□ 0.99
RAB40C-203ENST00000535977 GABPB1Q06547 395 aaPredicted RBP21.24■□□□□ 0.99
RAB40C-203ENST00000535977 KRT32Q14532 448 aa21.24■□□□□ 0.99
RAB40C-203ENST00000535977 CABLES1Q8TDN4 633 aa21.24■□□□□ 0.99
RAB40C-203ENST00000535977 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.24■□□□□ 0.99
RAB40C-203ENST00000535977 LAMB4A4D0S4 1761 aa21.23■□□□□ 0.99
RAB40C-203ENST00000535977 A0A087WZG4 1122 aa21.23■□□□□ 0.99
RAB40C-203ENST00000535977 ERVV-2B6SEH9 535 aa21.23■□□□□ 0.99
RAB40C-203ENST00000535977 GJB2P29033 226 aa21.23■□□□□ 0.99
RAB40C-203ENST00000535977 CHAF1AQ13111 956 aaPredicted RBP21.23■□□□□ 0.99
RAB40C-203ENST00000535977 BLOC1S2Q6QNY1 142 aa21.23■□□□□ 0.99
RAB40C-203ENST00000535977 PCDH11XQ9BZA7 1347 aa21.22■□□□□ 0.99
RAB40C-203ENST00000535977 PCDH11YQ9BZA8 1340 aa21.22■□□□□ 0.99
RAB40C-203ENST00000535977 SLFN14P0C7P3 912 aa21.22■□□□□ 0.99
RAB40C-203ENST00000535977 PDCP20941 246 aa21.22■□□□□ 0.99
RAB40C-203ENST00000535977 MAPK8IP2Q13387 824 aaPredicted RBP21.22■□□□□ 0.99
RAB40C-203ENST00000535977 UVSSAQ2YD98 709 aa21.22■□□□□ 0.99
RAB40C-203ENST00000535977 UBE3BQ7Z3V4 1068 aa21.22■□□□□ 0.99
RAB40C-203ENST00000535977 CCDC83Q8IWF9 413 aa21.22■□□□□ 0.99
RAB40C-203ENST00000535977 FAM184AQ8NB25 1140 aa21.22■□□□□ 0.99
RAB40C-203ENST00000535977 AFDNP55196 1824 aaKnown RBP21.22■□□□□ 0.99
RAB40C-203ENST00000535977 A0A0D9SFI3 127 aa21.21■□□□□ 0.99
RAB40C-203ENST00000535977 CPA1P15085 419 aa21.21■□□□□ 0.99
RAB40C-203ENST00000535977 CCDC183Q5T5S1 534 aa21.21■□□□□ 0.99
RAB40C-203ENST00000535977 USPL1Q5W0Q7 1092 aa21.21■□□□□ 0.99
RAB40C-203ENST00000535977 KLHDC4Q8TBB5 520 aa21.21■□□□□ 0.99
RAB40C-203ENST00000535977 ARFGEF2Q9Y6D5 1785 aa21.21■□□□□ 0.99
RAB40C-203ENST00000535977 CASP7P55210 303 aa21.21■□□□□ 0.99
RAB40C-203ENST00000535977 H7C1W4 665 aa21.2■□□□□ 0.98
RAB40C-203ENST00000535977 LARGE1O95461 756 aa21.2■□□□□ 0.98
RAB40C-203ENST00000535977 TFCP2Q12800 502 aa21.2■□□□□ 0.98
RAB40C-203ENST00000535977 ZCRB1Q8TBF4 217 aaKnown RBP21.2■□□□□ 0.98
RAB40C-203ENST00000535977 ME3Q16798 604 aa21.2■□□□□ 0.98
RAB40C-203ENST00000535977 GPR108Q9NPR9 543 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms