RNA–Protein interactions for RNA: ENST00000535170.5

ZKSCAN1-205, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

TSL 2 BASIC

Gene ZKSCAN1, Length 8,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-205ENST00000535170 RARSP54136 660 aaKnown RBP12.82□□□□□ -0.36
ZKSCAN1-205ENST00000535170 NPHP3Q7Z494 1330 aa12.82□□□□□ -0.36
ZKSCAN1-205ENST00000535170 TSGA10Q9BZW7 698 aa12.82□□□□□ -0.36
ZKSCAN1-205ENST00000535170 SH2D4AQ9H788 454 aa12.82□□□□□ -0.36
ZKSCAN1-205ENST00000535170 CEP83Q9Y592 693 aa12.82□□□□□ -0.36
ZKSCAN1-205ENST00000535170 TTC41PQ6P2S7 1318 aa12.82□□□□□ -0.36
ZKSCAN1-205ENST00000535170 PIP4K2BP78356 416 aa12.82□□□□□ -0.36
ZKSCAN1-205ENST00000535170 ALDH1L1O75891 902 aa12.81□□□□□ -0.36
ZKSCAN1-205ENST00000535170 IVLP07476 585 aa12.81□□□□□ -0.36
ZKSCAN1-205ENST00000535170 ZNF710Q8N1W2 664 aa12.81□□□□□ -0.36
ZKSCAN1-205ENST00000535170 OGFOD1Q8N543 542 aa12.81□□□□□ -0.36
ZKSCAN1-205ENST00000535170 RANBP6O60518 1105 aaKnown RBP12.81□□□□□ -0.36
ZKSCAN1-205ENST00000535170 KIAA0753Q2KHM9 967 aa12.81□□□□□ -0.36
ZKSCAN1-205ENST00000535170 GIMAP7Q8NHV1 300 aa12.81□□□□□ -0.36
ZKSCAN1-205ENST00000535170 TNPO1Q92973 898 aaKnown RBP12.81□□□□□ -0.36
ZKSCAN1-205ENST00000535170 CDCA7Q9BWT1 371 aaPredicted RBP12.81□□□□□ -0.36
ZKSCAN1-205ENST00000535170 FBXO3Q9UK99 471 aa12.81□□□□□ -0.36
ZKSCAN1-205ENST00000535170 URB2Q14146 1524 aaKnown RBP12.81□□□□□ -0.36
ZKSCAN1-205ENST00000535170 METAP2P50579 478 aaKnown RBP eCLIP12.81□□□□□ -0.365e-9■■■□□ 14.8
ZKSCAN1-205ENST00000535170 HDAC1Q13547 482 aaPredicted RBP12.81□□□□□ -0.36
ZKSCAN1-205ENST00000535170 UHRF1BP1Q6BDS2 1440 aa12.81□□□□□ -0.36
ZKSCAN1-205ENST00000535170 NBPF1Q3BBV0 1214 aa12.81□□□□□ -0.36
ZKSCAN1-205ENST00000535170 TMEM67Q5HYA8 995 aa12.81□□□□□ -0.36
ZKSCAN1-205ENST00000535170 ATP2A2P16615 1042 aaKnown RBP12.81□□□□□ -0.36
ZKSCAN1-205ENST00000535170 FLIIQ13045 1269 aa12.81□□□□□ -0.36
ZKSCAN1-205ENST00000535170 TUBB2AQ13885 445 aa12.81□□□□□ -0.36
ZKSCAN1-205ENST00000535170 ZNF804AQ7Z570 1209 aa12.81□□□□□ -0.36
ZKSCAN1-205ENST00000535170 TUBB2BQ9BVA1 445 aa12.81□□□□□ -0.36
ZKSCAN1-205ENST00000535170 SLU7O95391 586 aaKnown RBP12.8□□□□□ -0.36
ZKSCAN1-205ENST00000535170 KRT13P13646 458 aa12.8□□□□□ -0.36
ZKSCAN1-205ENST00000535170 PODXL2Q9NZ53 605 aa12.8□□□□□ -0.36
ZKSCAN1-205ENST00000535170 CCDC40Q4G0X9 1142 aa12.8□□□□□ -0.36
ZKSCAN1-205ENST00000535170 TMOD4Q9NZQ9 345 aa12.8□□□□□ -0.36
ZKSCAN1-205ENST00000535170 SPECC1Q5M775 1068 aa12.8□□□□□ -0.36
ZKSCAN1-205ENST00000535170 ABCC10Q5T3U5 1492 aa12.8□□□□□ -0.36
ZKSCAN1-205ENST00000535170 NAP1L3Q99457 506 aaPredicted RBP12.8□□□□□ -0.36
ZKSCAN1-205ENST00000535170 PSMA7O14818 248 aa12.8□□□□□ -0.36
ZKSCAN1-205ENST00000535170 GNA11P29992 359 aa12.8□□□□□ -0.36
ZKSCAN1-205ENST00000535170 TNRQ92752 1358 aa12.79□□□□□ -0.36
ZKSCAN1-205ENST00000535170 KRT83P78385 493 aa12.79□□□□□ -0.36
ZKSCAN1-205ENST00000535170 TDRD12Q587J7 1177 aaKnown RBP12.79□□□□□ -0.36
ZKSCAN1-205ENST00000535170 C6orf50Q9HD87 102 aa12.79□□□□□ -0.36
ZKSCAN1-205ENST00000535170 IQCDQ96DY2 449 aa12.79□□□□□ -0.36
ZKSCAN1-205ENST00000535170 CROCCP2Q86T23 111 aa12.79□□□□□ -0.36
ZKSCAN1-205ENST00000535170 UGGT2Q9NYU1 1516 aa12.79□□□□□ -0.36
ZKSCAN1-205ENST00000535170 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.79□□□□□ -0.36
ZKSCAN1-205ENST00000535170 CDCA7LQ96GN5 454 aa12.79□□□□□ -0.36
ZKSCAN1-205ENST00000535170 TSPY2A6NKD2 308 aa12.79□□□□□ -0.36
ZKSCAN1-205ENST00000535170 RBM28Q9NW13 759 aaKnown RBP12.79□□□□□ -0.36
ZKSCAN1-205ENST00000535170 RAD50Q92878 1312 aa12.79□□□□□ -0.36
ZKSCAN1-205ENST00000535170 RRS1Q15050 365 aaKnown RBP12.78□□□□□ -0.36
ZKSCAN1-205ENST00000535170 DKC1O60832 514 aaKnown RBP eCLIP12.78□□□□□ -0.36
ZKSCAN1-205ENST00000535170 GAS8O95995 478 aa12.78□□□□□ -0.36
ZKSCAN1-205ENST00000535170 IQCGQ9H095 443 aaKnown RBP12.78□□□□□ -0.36
ZKSCAN1-205ENST00000535170 HS1BP3Q53T59 392 aa12.78□□□□□ -0.36
ZKSCAN1-205ENST00000535170 ANKRD2Q9GZV1 360 aa12.78□□□□□ -0.36
ZKSCAN1-205ENST00000535170 ALDH3A1P30838 453 aa12.78□□□□□ -0.36
ZKSCAN1-205ENST00000535170 DYNC1I1O14576 645 aa12.78□□□□□ -0.36
ZKSCAN1-205ENST00000535170 PPP2R5BQ15173 497 aa12.78□□□□□ -0.36
ZKSCAN1-205ENST00000535170 PRPF40BQ6NWY9 871 aaKnown RBP12.78□□□□□ -0.36
ZKSCAN1-205ENST00000535170 CSRNP2Q9H175 543 aa12.78□□□□□ -0.36
ZKSCAN1-205ENST00000535170 VIMP08670 466 aaKnown RBP12.78□□□□□ -0.36
ZKSCAN1-205ENST00000535170 MYD88Q99836 296 aa12.78□□□□□ -0.36
ZKSCAN1-205ENST00000535170 COMMD10Q9Y6G5 202 aa12.78□□□□□ -0.36
ZKSCAN1-205ENST00000535170 IL15P40933 162 aaPredicted RBP12.78□□□□□ -0.36
ZKSCAN1-205ENST00000535170 NEK1Q96PY6 1258 aa12.78□□□□□ -0.36
ZKSCAN1-205ENST00000535170 RFC4P35249 363 aa12.77□□□□□ -0.36
ZKSCAN1-205ENST00000535170 WTAPQ15007 396 aa12.77□□□□□ -0.36
ZKSCAN1-205ENST00000535170 CTR9Q6PD62 1173 aa12.77□□□□□ -0.36
ZKSCAN1-205ENST00000535170 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.77□□□□□ -0.364e-6■■□□□ 13.2
ZKSCAN1-205ENST00000535170 SPDYE4A6NLX3 237 aa12.77□□□□□ -0.36
ZKSCAN1-205ENST00000535170 SYCE3A1L190 88 aa12.77□□□□□ -0.36
ZKSCAN1-205ENST00000535170 NUTM2BA6NNL0 878 aaPredicted RBP12.77□□□□□ -0.36
ZKSCAN1-205ENST00000535170 NUTM2EB1AL46 878 aaPredicted RBP12.77□□□□□ -0.36
ZKSCAN1-205ENST00000535170 OPA1O60313 960 aa12.77□□□□□ -0.36
ZKSCAN1-205ENST00000535170 HSF2BPO75031 334 aa12.77□□□□□ -0.36
ZKSCAN1-205ENST00000535170 NUTM2AQ8IVF1 878 aaPredicted RBP12.77□□□□□ -0.36
ZKSCAN1-205ENST00000535170 WDR78Q5VTH9 848 aa12.77□□□□□ -0.37
ZKSCAN1-205ENST00000535170 SSH1Q8WYL5 1049 aa12.77□□□□□ -0.37
ZKSCAN1-205ENST00000535170 PNMA2Q9UL42 364 aa12.77□□□□□ -0.37
ZKSCAN1-205ENST00000535170 SKIDA1Q1XH10 827 aa12.77□□□□□ -0.37
ZKSCAN1-205ENST00000535170 BRAPQ7Z569 592 aa12.77□□□□□ -0.37
ZKSCAN1-205ENST00000535170 FSIP1Q8NA03 581 aa12.77□□□□□ -0.37
ZKSCAN1-205ENST00000535170 MAST1Q9Y2H9 1570 aa12.77□□□□□ -0.37
ZKSCAN1-205ENST00000535170 ATP5DP30049 168 aa12.77□□□□□ -0.37
ZKSCAN1-205ENST00000535170 TTLL12Q14166 644 aaPredicted RBP12.77□□□□□ -0.37
ZKSCAN1-205ENST00000535170 BMS1Q14692 1282 aaKnown RBP12.77□□□□□ -0.37
ZKSCAN1-205ENST00000535170 SYNCQ9H7C4 482 aa12.77□□□□□ -0.37
ZKSCAN1-205ENST00000535170 LRSAM1Q6UWE0 723 aa12.76□□□□□ -0.37
ZKSCAN1-205ENST00000535170 CCDC110Q8TBZ0 833 aa12.76□□□□□ -0.37
ZKSCAN1-205ENST00000535170 EXOC6BQ9Y2D4 811 aa12.76□□□□□ -0.37
ZKSCAN1-205ENST00000535170 A2MP01023 1474 aa12.76□□□□□ -0.37
ZKSCAN1-205ENST00000535170 LDHAL6AQ6ZMR3 332 aa12.76□□□□□ -0.37
ZKSCAN1-205ENST00000535170 FAM177A1Q8N128 213 aaPredicted RBP12.76□□□□□ -0.37
ZKSCAN1-205ENST00000535170 HOXA7P31268 230 aaPredicted RBP12.76□□□□□ -0.37
ZKSCAN1-205ENST00000535170 C14orf93Q9H972 538 aaKnown RBP12.76□□□□□ -0.37
ZKSCAN1-205ENST00000535170 RPL13P26373 211 aaKnown RBP12.76□□□□□ -0.37
ZKSCAN1-205ENST00000535170 EYA3Q99504 573 aa12.76□□□□□ -0.37
ZKSCAN1-205ENST00000535170 STAT6P42226 847 aa12.76□□□□□ -0.37
ZKSCAN1-205ENST00000535170 KLHL40Q2TBA0 621 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms