RNA–Protein interactions for RNA: ENST00000532157.5

POLB-217, Transcript of DNA polymerase beta, humanhuman

TSL 3

Gene POLB, Length 675 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-217ENST00000532157 ANKRD13DQ6ZTN6 518 aa13.73□□□□□ -0.21
POLB-217ENST00000532157 SAPCD2Q86UD0 394 aa13.73□□□□□ -0.21
POLB-217ENST00000532157 PTCD2Q8WV60 388 aaKnown RBP13.73□□□□□ -0.21
POLB-217ENST00000532157 C7orf43Q8WVR3 580 aa13.73□□□□□ -0.21
POLB-217ENST00000532157 CNKSR1Q969H4 720 aa13.73□□□□□ -0.21
POLB-217ENST00000532157 PPM1GO15355 546 aaPredicted RBP13.72□□□□□ -0.21
POLB-217ENST00000532157 GTPBP6O43824 516 aaPredicted RBP13.72□□□□□ -0.21
POLB-217ENST00000532157 DNAJC10Q8IXB1 793 aa13.72□□□□□ -0.21
POLB-217ENST00000532157 CCDC24Q8N4L8 307 aa13.72□□□□□ -0.21
POLB-217ENST00000532157 NBPF15Q8N660 670 aa13.72□□□□□ -0.21
POLB-217ENST00000532157 NFATC2IPQ8NCF5 419 aa13.72□□□□□ -0.21
POLB-217ENST00000532157 YTHDC1Q96MU7 727 aaKnown RBP13.72□□□□□ -0.21
POLB-217ENST00000532157 FZD9O00144 591 aa13.71□□□□□ -0.21
POLB-217ENST00000532157 CYP19A1P11511 503 aaPredicted RBP13.71□□□□□ -0.21
POLB-217ENST00000532157 WDR43Q15061 677 aaKnown RBP eCLIP13.71□□□□□ -0.21
POLB-217ENST00000532157 STYK1Q6J9G0 422 aa13.71□□□□□ -0.21
POLB-217ENST00000532157 PRR5LQ6MZQ0 368 aa13.71□□□□□ -0.21
POLB-217ENST00000532157 BICDL1Q6ZP65 573 aa13.71□□□□□ -0.21
POLB-217ENST00000532157 GPC2Q8N158 579 aa13.71□□□□□ -0.21
POLB-217ENST00000532157 HHIPL1Q96JK4 782 aa13.71□□□□□ -0.21
POLB-217ENST00000532157 ZNF277Q9NRM2 450 aaPredicted RBP13.71□□□□□ -0.21
POLB-217ENST00000532157 SRGNP10124 158 aa13.7□□□□□ -0.22
POLB-217ENST00000532157 FKBP4Q02790 459 aaKnown RBP eCLIP13.7□□□□□ -0.22
POLB-217ENST00000532157 CCDC93Q567U6 631 aa13.69□□□□□ -0.22
POLB-217ENST00000532157 FAM9BQ8IZU0 186 aa13.69□□□□□ -0.22
POLB-217ENST00000532157 ZBTB1Q9Y2K1 713 aa13.69□□□□□ -0.22
POLB-217ENST00000532157 CUL9Q8IWT3 2517 aa13.68□□□□□ -0.22
POLB-217ENST00000532157 TBC1D9BQ66K14 1250 aa13.68□□□□□ -0.22
POLB-217ENST00000532157 MASTLQ96GX5 879 aa13.68□□□□□ -0.22
POLB-217ENST00000532157 ZIC5Q96T25 663 aa13.68□□□□□ -0.22
POLB-217ENST00000532157 MTHFSP49914 203 aa13.67□□□□□ -0.22
POLB-217ENST00000532157 FXR1P51114 621 aaKnown RBP eCLIP13.67□□□□□ -0.22
POLB-217ENST00000532157 ZNF530Q6P9A1 599 aaPredicted RBP13.67□□□□□ -0.22
POLB-217ENST00000532157 CRISPLD2Q9H0B8 497 aa13.67□□□□□ -0.22
POLB-217ENST00000532157 COL6A3P12111 3177 aa13.67□□□□□ -0.22
POLB-217ENST00000532157 TBC1D12O60347 775 aa13.66□□□□□ -0.22
POLB-217ENST00000532157 EPS15P42566 896 aa13.66□□□□□ -0.22
POLB-217ENST00000532157 LSM11P83369 360 aaKnown RBP eCLIP13.66□□□□□ -0.22
POLB-217ENST00000532157 NOGQ13253 232 aa13.66□□□□□ -0.22
POLB-217ENST00000532157 PLEKHO1Q53GL0 409 aaPredicted RBP13.66□□□□□ -0.22
POLB-217ENST00000532157 CENPFP49454 3210 aa13.66□□□□□ -0.22
POLB-217ENST00000532157 BCORQ6W2J9 1755 aa13.66□□□□□ -0.22
POLB-217ENST00000532157 CELF2O95319 508 aaKnown RBP13.65□□□□□ -0.22
POLB-217ENST00000532157 LMOD1P29536 600 aaPredicted RBP13.65□□□□□ -0.22
POLB-217ENST00000532157 IARSP41252 1262 aaKnown RBP13.65□□□□□ -0.22
POLB-217ENST00000532157 SCNN1DP51172 638 aa13.65□□□□□ -0.22
POLB-217ENST00000532157 CCDC184Q52MB2 194 aa13.65□□□□□ -0.22
POLB-217ENST00000532157 USP50Q70EL3 339 aaPredicted RBP13.65□□□□□ -0.22
POLB-217ENST00000532157 NUDCQ9Y266 331 aa13.65□□□□□ -0.22
POLB-217ENST00000532157 BRCA2P51587 3418 aa13.64□□□□□ -0.23
POLB-217ENST00000532157 SCN11AQ9UI33 1791 aa13.64□□□□□ -0.23
POLB-217ENST00000532157 DLL1O00548 723 aa13.64□□□□□ -0.23
POLB-217ENST00000532157 PDE4AP27815 886 aa13.64□□□□□ -0.23
POLB-217ENST00000532157 EIF4A2Q14240 407 aaKnown RBP13.64□□□□□ -0.23
POLB-217ENST00000532157 OLFM4Q6UX06 510 aa13.64□□□□□ -0.23
POLB-217ENST00000532157 RNF166Q96A37 237 aaPredicted RBP13.64□□□□□ -0.23
POLB-217ENST00000532157 SAGE1Q9NXZ1 904 aa13.64□□□□□ -0.23
POLB-217ENST00000532157 HPS5Q9UPZ3 1129 aa13.64□□□□□ -0.23
POLB-217ENST00000532157 GJA3Q9Y6H8 435 aa13.64□□□□□ -0.23
POLB-217ENST00000532157 SCN7AQ01118 1682 aa13.63□□□□□ -0.23
POLB-217ENST00000532157 PBX2P40425 430 aa13.63□□□□□ -0.23
POLB-217ENST00000532157 EIF5P55010 431 aaKnown RBP13.63□□□□□ -0.23
POLB-217ENST00000532157 AMOTQ4VCS5 1084 aa13.63□□□□□ -0.23
POLB-217ENST00000532157 POTEEQ6S8J3 1075 aa13.63□□□□□ -0.23
POLB-217ENST00000532157 CTU1Q7Z7A3 348 aaKnown RBP13.63□□□□□ -0.23
POLB-217ENST00000532157 RTKN2Q8IZC4 609 aa13.63□□□□□ -0.23
POLB-217ENST00000532157 CNBD1Q8NA66 436 aa13.63□□□□□ -0.23
POLB-217ENST00000532157 HTTP42858 3142 aa13.63□□□□□ -0.23
POLB-217ENST00000532157 COL4A5P29400 1685 aa13.63□□□□□ -0.23
POLB-217ENST00000532157 U2SURPO15042 1029 aaKnown RBP13.62□□□□□ -0.23
POLB-217ENST00000532157 CANXP27824 592 aaKnown RBP13.62□□□□□ -0.23
POLB-217ENST00000532157 PPP1R15BQ5SWA1 713 aa13.62□□□□□ -0.23
POLB-217ENST00000532157 SYNE4Q8N205 404 aa13.62□□□□□ -0.23
POLB-217ENST00000532157 AKAP11Q9UKA4 1901 aa13.61□□□□□ -0.23
POLB-217ENST00000532157 DIAPH1O60610 1272 aaKnown RBP13.61□□□□□ -0.23
POLB-217ENST00000532157 C1orf141Q5JVX7 400 aa13.61□□□□□ -0.23
POLB-217ENST00000532157 JDP2Q8WYK2 163 aa13.61□□□□□ -0.23
POLB-217ENST00000532157 POLKQ9UBT6 870 aa13.61□□□□□ -0.23
POLB-217ENST00000532157 A0A087WZG4 1122 aa13.6□□□□□ -0.23
POLB-217ENST00000532157 EIF6P56537 245 aaKnown RBP13.6□□□□□ -0.23
POLB-217ENST00000532157 ST5P78524 1137 aa13.6□□□□□ -0.23
POLB-217ENST00000532157 AKAP4Q5JQC9 854 aa13.6□□□□□ -0.23
POLB-217ENST00000532157 SNED1Q8TER0 1413 aa13.6□□□□□ -0.23
POLB-217ENST00000532157 GLIS2Q9BZE0 524 aaPredicted RBP13.6□□□□□ -0.23
POLB-217ENST00000532157 FAM155AB1AL88 458 aaPredicted RBP13.59□□□□□ -0.23
POLB-217ENST00000532157 TRPA1O75762 1119 aa13.59□□□□□ -0.23
POLB-217ENST00000532157 NEFMP07197 916 aa13.59□□□□□ -0.23
POLB-217ENST00000532157 NPR1P16066 1061 aa13.59□□□□□ -0.23
POLB-217ENST00000532157 SLC39A6Q13433 755 aa13.59□□□□□ -0.23
POLB-217ENST00000532157 SETDB2Q96T68 719 aa13.59□□□□□ -0.23
POLB-217ENST00000532157 LARP6Q9BRS8 491 aaKnown RBP13.59□□□□□ -0.23
POLB-217ENST00000532157 RNF186Q9NXI6 227 aa13.59□□□□□ -0.23
POLB-217ENST00000532157 RANBP2P49792 3224 aaKnown RBP13.59□□□□□ -0.23
POLB-217ENST00000532157 NPHP1O15259 732 aa13.58□□□□□ -0.24
POLB-217ENST00000532157 U2AF1L5P0DN76 240 aaPredicted RBP13.58□□□□□ -0.24
POLB-217ENST00000532157 HNRNPUQ00839 825 aaKnown RBP eCLIP13.58□□□□□ -0.24
POLB-217ENST00000532157 U2AF1Q01081 240 aaKnown RBP eCLIP13.58□□□□□ -0.24
POLB-217ENST00000532157 VSIG10Q8N0Z9 540 aa13.58□□□□□ -0.24
POLB-217ENST00000532157 OXER1Q8TDS5 423 aa13.58□□□□□ -0.24
POLB-217ENST00000532157 PSMD1Q99460 953 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms