RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 KDM3BQ7LBC6 1761 aa8.87□□□□□ -0.99
C11orf54-207ENST00000528288 TAF5LO75529 589 aa8.87□□□□□ -0.99
C11orf54-207ENST00000528288 RPS6KB1P23443 525 aa8.87□□□□□ -0.99
C11orf54-207ENST00000528288 TTLL7Q6ZT98 887 aa8.87□□□□□ -0.99
C11orf54-207ENST00000528288 FBXW7Q969H0 707 aa8.87□□□□□ -0.99
C11orf54-207ENST00000528288 FTOQ9C0B1 505 aaKnown RBP eCLIP8.87□□□□□ -0.99
C11orf54-207ENST00000528288 ZBTB3Q9H5J0 574 aa8.87□□□□□ -0.99
C11orf54-207ENST00000528288 MED1Q15648 1581 aaPredicted RBP8.87□□□□□ -0.99
C11orf54-207ENST00000528288 TPM2P07951 284 aa8.87□□□□□ -0.99
C11orf54-207ENST00000528288 GUCY1B3Q02153 619 aa8.87□□□□□ -0.99
C11orf54-207ENST00000528288 HS1BP3Q53T59 392 aa8.87□□□□□ -0.99
C11orf54-207ENST00000528288 HSP90AB3PQ58FF7 597 aa8.87□□□□□ -0.99
C11orf54-207ENST00000528288 VSIG10Q8N0Z9 540 aa8.87□□□□□ -0.99
C11orf54-207ENST00000528288 TMEM87AQ8NBN3 555 aa8.87□□□□□ -0.99
C11orf54-207ENST00000528288 ZSCAN31Q96LW9 406 aaPredicted RBP8.87□□□□□ -0.99
C11orf54-207ENST00000528288 CHMP4AQ9BY43 222 aa8.87□□□□□ -0.99
C11orf54-207ENST00000528288 HEG1Q9ULI3 1381 aa8.87□□□□□ -0.99
C11orf54-207ENST00000528288 KDM6AO15550 1401 aaPredicted RBP8.87□□□□□ -0.99
C11orf54-207ENST00000528288 GOLIM4O00461 696 aa8.86□□□□□ -0.99
C11orf54-207ENST00000528288 CABP4P57796 275 aa8.86□□□□□ -0.99
C11orf54-207ENST00000528288 CCT2P78371 535 aaKnown RBP8.86□□□□□ -0.99
C11orf54-207ENST00000528288 Q6ZUG5 572 aa8.86□□□□□ -0.99
C11orf54-207ENST00000528288 LUZP1Q86V48 1076 aa8.86□□□□□ -0.99
C11orf54-207ENST00000528288 RAB11FIP4Q86YS3 637 aa8.86□□□□□ -0.99
C11orf54-207ENST00000528288 UBE2Q2Q8WVN8 375 aa8.86□□□□□ -0.99
C11orf54-207ENST00000528288 SH2B1Q9NRF2 756 aaPredicted RBP8.86□□□□□ -0.99
C11orf54-207ENST00000528288 ATP6V1DQ9Y5K8 247 aa8.86□□□□□ -0.99
C11orf54-207ENST00000528288 A1BGP04217 495 aa8.86□□□□□ -0.99
C11orf54-207ENST00000528288 BRF1Q92994 677 aa8.86□□□□□ -0.99
C11orf54-207ENST00000528288 SNRKQ9NRH2 765 aa8.86□□□□□ -0.99
C11orf54-207ENST00000528288 DACT1Q9NYF0 836 aa8.86□□□□□ -0.99
C11orf54-207ENST00000528288 GOLGA6L4A6NEF3 574 aa8.86□□□□□ -0.99
C11orf54-207ENST00000528288 PSMA5P28066 241 aa8.86□□□□□ -0.99
C11orf54-207ENST00000528288 TM6SF1Q9BZW5 370 aa8.86□□□□□ -0.99
C11orf54-207ENST00000528288 RGPD5Q99666 1765 aa8.86□□□□□ -0.99
C11orf54-207ENST00000528288 EPB41L2O43491 1005 aaKnown RBP8.85□□□□□ -0.99
C11orf54-207ENST00000528288 SNRPA1P09661 255 aaKnown RBP8.85□□□□□ -0.99
C11orf54-207ENST00000528288 RFX5P48382 616 aaPredicted RBP8.85□□□□□ -0.99
C11orf54-207ENST00000528288 KIAA2012Q0VF49 1180 aa8.85□□□□□ -0.99
C11orf54-207ENST00000528288 RNF20Q5VTR2 975 aa8.85□□□□□ -0.99
C11orf54-207ENST00000528288 NCOA5Q9HCD5 579 aaKnown RBP8.85□□□□□ -0.99
C11orf54-207ENST00000528288 NPHP4O75161 1426 aaPredicted RBP8.85□□□□□ -0.99
C11orf54-207ENST00000528288 KDM4AO75164 1064 aa8.85□□□□□ -0.99
C11orf54-207ENST00000528288 CYP21A2P08686 494 aa8.85□□□□□ -0.99
C11orf54-207ENST00000528288 IFNL2Q8IZJ0 200 aa8.85□□□□□ -0.99
C11orf54-207ENST00000528288 ERCC4Q92889 916 aaPredicted RBP8.85□□□□□ -0.99
C11orf54-207ENST00000528288 SPATA32Q96LK8 384 aa8.85□□□□□ -0.99
C11orf54-207ENST00000528288 MEGF6O75095 1541 aa8.85□□□□□ -0.99
C11orf54-207ENST00000528288 UTYO14607 1347 aa8.85□□□□□ -0.99
C11orf54-207ENST00000528288 KRT85P78386 507 aa8.85□□□□□ -0.99
C11orf54-207ENST00000528288 LRRC24Q50LG9 513 aa8.85□□□□□ -0.99
C11orf54-207ENST00000528288 STOX1Q6ZVD7 989 aa8.85□□□□□ -0.99
C11orf54-207ENST00000528288 KCNB2Q92953 911 aa8.85□□□□□ -0.99
C11orf54-207ENST00000528288 NEK1Q96PY6 1258 aa8.85□□□□□ -0.99
C11orf54-207ENST00000528288 NBPF26B4DH59 902 aa8.85□□□□□ -0.99
C11orf54-207ENST00000528288 RRP9O43818 475 aaKnown RBP8.85□□□□□ -0.99
C11orf54-207ENST00000528288 NBPF14Q5TI25 921 aa8.85□□□□□ -0.99
C11orf54-207ENST00000528288 NBPF10Q6P3W6 841 aaKnown RBP8.85□□□□□ -0.99
C11orf54-207ENST00000528288 NBPF15Q8N660 670 aa8.85□□□□□ -0.99
C11orf54-207ENST00000528288 BICD2Q8TD16 824 aa8.85□□□□□ -0.99
C11orf54-207ENST00000528288 PUS3Q9BZE2 481 aaKnown RBP8.85□□□□□ -0.99
C11orf54-207ENST00000528288 GPHNQ9NQX3 736 aaPredicted RBP8.85□□□□□ -0.99
C11orf54-207ENST00000528288 HDAC5Q9UQL6 1122 aa8.85□□□□□ -0.99
C11orf54-207ENST00000528288 HIP1O00291 1037 aa8.84□□□□□ -0.99
C11orf54-207ENST00000528288 APOBRQ0VD83 1088 aa8.84□□□□□ -0.99
C11orf54-207ENST00000528288 TTLL5Q6EMB2 1281 aa8.84□□□□□ -0.99
C11orf54-207ENST00000528288 LRP10Q7Z4F1 713 aa8.84□□□□□ -0.99
C11orf54-207ENST00000528288 FUCA2Q9BTY2 467 aa8.84□□□□□ -0.99
C11orf54-207ENST00000528288 PYCARDQ9ULZ3 195 aa8.84□□□□□ -0.99
C11orf54-207ENST00000528288 ZNF609O15014 1411 aa8.84□□□□□ -0.99
C11orf54-207ENST00000528288 H3BQV1 296 aa8.84□□□□□ -0.99
C11orf54-207ENST00000528288 NR1I2O75469 434 aa8.84□□□□□ -0.99
C11orf54-207ENST00000528288 ATF3P18847 181 aa8.84□□□□□ -0.99
C11orf54-207ENST00000528288 IFFO2Q5TF58 517 aa8.84□□□□□ -0.99
C11orf54-207ENST00000528288 NUP62CLQ9H1M0 184 aa8.84□□□□□ -0.99
C11orf54-207ENST00000528288 CHD2O14647 1828 aaKnown RBP8.84□□□□□ -0.99
C11orf54-207ENST00000528288 MED23Q9ULK4 1368 aa8.84□□□□□ -0.99
C11orf54-207ENST00000528288 LMO7Q8WWI1 1683 aa8.84□□□□□ -0.99
C11orf54-207ENST00000528288 HAND2P61296 217 aa8.84□□□□□ -0.99
C11orf54-207ENST00000528288 FMNL2Q96PY5 1086 aa8.84□□□□□ -0.99
C11orf54-207ENST00000528288 NOLC1Q14978 699 aaKnown RBP eCLIP8.83□□□□□ -1
C11orf54-207ENST00000528288 ANO6Q4KMQ2 910 aa8.83□□□□□ -1
C11orf54-207ENST00000528288 PGBD1Q96JS3 809 aa8.83□□□□□ -1
C11orf54-207ENST00000528288 COPRSQ9NQ92 184 aa8.83□□□□□ -1
C11orf54-207ENST00000528288 N4BP2Q86UW6 1770 aaPredicted RBP8.83□□□□□ -1
C11orf54-207ENST00000528288 ATP5JP18859 108 aa8.83□□□□□ -1
C11orf54-207ENST00000528288 FKBP4Q02790 459 aaKnown RBP eCLIP8.83□□□□□ -1
C11orf54-207ENST00000528288 SCRN1Q12765 414 aa8.83□□□□□ -1
C11orf54-207ENST00000528288 OTUD7BQ6GQQ9 843 aa8.83□□□□□ -1
C11orf54-207ENST00000528288 LEO1Q8WVC0 666 aaPredicted RBP8.83□□□□□ -1
C11orf54-207ENST00000528288 TNMDQ9H2S6 317 aa8.83□□□□□ -1
C11orf54-207ENST00000528288 NRBP1Q9UHY1 535 aa8.83□□□□□ -1
C11orf54-207ENST00000528288 TYRO3Q06418 890 aa8.83□□□□□ -1
C11orf54-207ENST00000528288 MAP3K11Q16584 847 aa8.83□□□□□ -1
C11orf54-207ENST00000528288 DRC7Q8IY82 874 aa8.83□□□□□ -1
C11orf54-207ENST00000528288 FAM184AQ8NB25 1140 aa8.83□□□□□ -1
C11orf54-207ENST00000528288 KCNF1Q9H3M0 494 aa8.83□□□□□ -1
C11orf54-207ENST00000528288 C19orf44Q9H6X5 657 aa8.83□□□□□ -1
C11orf54-207ENST00000528288 MRVI1Q9Y6F6 885 aa8.83□□□□□ -1
C11orf54-207ENST00000528288 CCDC192P0DO97 292 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms