RNA–Protein interactions for RNA: ENST00000526388.1

LINC00958-202, long intergenic non-protein coding RNA 958, humanhuman

TSL 2 BASIC

Gene LINC00958, Length 607 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-202ENST00000526388 ERVV-1B6SEH8 477 aa10.27□□□□□ -0.77
LINC00958-202ENST00000526388 VEGFAP15692 232 aaPredicted RBP10.27□□□□□ -0.77
LINC00958-202ENST00000526388 GTF2E1P29083 439 aaPredicted RBP10.27□□□□□ -0.77
LINC00958-202ENST00000526388 CCDC146Q8IYE0 955 aa10.27□□□□□ -0.77
LINC00958-202ENST00000526388 NYXQ9GZU5 481 aa10.27□□□□□ -0.77
LINC00958-202ENST00000526388 ZBTB3Q9H5J0 574 aa10.27□□□□□ -0.77
LINC00958-202ENST00000526388 UBN2Q6ZU65 1347 aa10.27□□□□□ -0.77
LINC00958-202ENST00000526388 KLRG2A4D1S0 409 aaPredicted RBP10.26□□□□□ -0.77
LINC00958-202ENST00000526388 GPTP24298 496 aa10.26□□□□□ -0.77
LINC00958-202ENST00000526388 TMPOP42166 694 aaKnown RBP10.26□□□□□ -0.77
LINC00958-202ENST00000526388 HTRA3P83110 453 aa10.26□□□□□ -0.77
LINC00958-202ENST00000526388 WDR43Q15061 677 aaKnown RBP eCLIP10.26□□□□□ -0.77
LINC00958-202ENST00000526388 NUTM1Q86Y26 1132 aa10.26□□□□□ -0.77
LINC00958-202ENST00000526388 DDX60Q8IY21 1712 aaKnown RBP10.26□□□□□ -0.77
LINC00958-202ENST00000526388 EIF2S2P20042 333 aaKnown RBP10.25□□□□□ -0.77
LINC00958-202ENST00000526388 FKBP4Q02790 459 aaKnown RBP eCLIP10.25□□□□□ -0.77
LINC00958-202ENST00000526388 OLFM4Q6UX06 510 aa10.25□□□□□ -0.77
LINC00958-202ENST00000526388 SNED1Q8TER0 1413 aa10.24□□□□□ -0.77
LINC00958-202ENST00000526388 ADAMTSL1Q8N6G6 1762 aa10.24□□□□□ -0.77
LINC00958-202ENST00000526388 TAF1P21675 1872 aa10.24□□□□□ -0.77
LINC00958-202ENST00000526388 ALDH1B1P30837 517 aa10.24□□□□□ -0.77
LINC00958-202ENST00000526388 NEUROD2Q15784 382 aa10.24□□□□□ -0.77
LINC00958-202ENST00000526388 PROSER3Q2NL68 480 aa10.24□□□□□ -0.77
LINC00958-202ENST00000526388 CRY2Q49AN0 593 aa10.24□□□□□ -0.77
LINC00958-202ENST00000526388 DNAJC5GQ8N7S2 189 aa10.24□□□□□ -0.77
LINC00958-202ENST00000526388 C7orf43Q8WVR3 580 aa10.24□□□□□ -0.77
LINC00958-202ENST00000526388 RPGRQ92834 1020 aaKnown RBP10.24□□□□□ -0.77
LINC00958-202ENST00000526388 ZNF277Q9NRM2 450 aaPredicted RBP10.24□□□□□ -0.77
LINC00958-202ENST00000526388 BABAM1Q9NWV8 329 aa10.24□□□□□ -0.77
LINC00958-202ENST00000526388 COL4A5P29400 1685 aa10.23□□□□□ -0.77
LINC00958-202ENST00000526388 DDNO94850 711 aaPredicted RBP10.23□□□□□ -0.77
LINC00958-202ENST00000526388 NTSR2O95665 410 aa10.23□□□□□ -0.77
LINC00958-202ENST00000526388 ANXA1P04083 346 aa10.23□□□□□ -0.77
LINC00958-202ENST00000526388 GIGYF2Q6Y7W6 1299 aaKnown RBP10.23□□□□□ -0.77
LINC00958-202ENST00000526388 LRP10Q7Z4F1 713 aa10.23□□□□□ -0.77
LINC00958-202ENST00000526388 RTKN2Q8IZC4 609 aa10.23□□□□□ -0.77
LINC00958-202ENST00000526388 NECTIN2Q92692 538 aa10.23□□□□□ -0.77
LINC00958-202ENST00000526388 KLRG1Q96E93 195 aa10.23□□□□□ -0.77
LINC00958-202ENST00000526388 LRRC37AA6NMS7 1700 aa10.23□□□□□ -0.77
LINC00958-202ENST00000526388 ZNF541Q9H0D2 1346 aa10.23□□□□□ -0.77
LINC00958-202ENST00000526388 POTECB2RU33 542 aa10.22□□□□□ -0.77
LINC00958-202ENST00000526388 PDIA6Q15084 440 aa10.22□□□□□ -0.77
LINC00958-202ENST00000526388 SUSD4Q5VX71 490 aa10.22□□□□□ -0.77
LINC00958-202ENST00000526388 PAXIP1Q6ZW49 1069 aaPredicted RBP10.22□□□□□ -0.77
LINC00958-202ENST00000526388 ZNF34Q8IZ26 560 aa10.22□□□□□ -0.77
LINC00958-202ENST00000526388 RUNDC1Q96C34 613 aa10.22□□□□□ -0.77
LINC00958-202ENST00000526388 IQCA1LA6NCM1 817 aa10.21□□□□□ -0.77
LINC00958-202ENST00000526388 IARSP41252 1262 aaKnown RBP10.21□□□□□ -0.77
LINC00958-202ENST00000526388 KRT24Q2M2I5 525 aa10.21□□□□□ -0.77
LINC00958-202ENST00000526388 PARP10Q53GL7 1025 aa10.21□□□□□ -0.77
LINC00958-202ENST00000526388 PPP1R42Q7Z4L9 355 aa10.21□□□□□ -0.77
LINC00958-202ENST00000526388 CFAP44Q96MT7 982 aa10.21□□□□□ -0.77
LINC00958-202ENST00000526388 LAS1LQ9Y4W2 734 aaKnown RBP10.21□□□□□ -0.77
LINC00958-202ENST00000526388 LTBP1Q14766 1721 aa10.21□□□□□ -0.78
LINC00958-202ENST00000526388 PPEF1O14829 653 aaPredicted RBP10.2□□□□□ -0.78
LINC00958-202ENST00000526388 SNPHO15079 494 aa10.2□□□□□ -0.78
LINC00958-202ENST00000526388 HOXA10P31260 410 aaPredicted RBP10.2□□□□□ -0.78
LINC00958-202ENST00000526388 AIMP1Q12904 312 aaKnown RBP10.2□□□□□ -0.78
LINC00958-202ENST00000526388 HSP90AB3PQ58FF7 597 aa10.2□□□□□ -0.78
LINC00958-202ENST00000526388 RNF123Q5XPI4 1314 aa10.2□□□□□ -0.78
LINC00958-202ENST00000526388 SLC51AQ86UW1 340 aa10.2□□□□□ -0.78
LINC00958-202ENST00000526388 SYNE4Q8N205 404 aa10.2□□□□□ -0.78
LINC00958-202ENST00000526388 XAGE3Q8WTP9 111 aa10.2□□□□□ -0.78
LINC00958-202ENST00000526388 PSMD1Q99460 953 aa10.2□□□□□ -0.78
LINC00958-202ENST00000526388 UTP14AQ9BVJ6 771 aaKnown RBP10.2□□□□□ -0.78
LINC00958-202ENST00000526388 PRKRIP1Q9H875 184 aaPredicted RBP10.2□□□□□ -0.78
LINC00958-202ENST00000526388 CHPF2Q9P2E5 772 aa10.2□□□□□ -0.78
LINC00958-202ENST00000526388 ADAMTS8Q9UP79 889 aa10.2□□□□□ -0.78
LINC00958-202ENST00000526388 ABCC4O15439 1325 aa10.19□□□□□ -0.78
LINC00958-202ENST00000526388 CHL1O00533 1208 aa10.19□□□□□ -0.78
LINC00958-202ENST00000526388 IFFO2Q5TF58 517 aa10.19□□□□□ -0.78
LINC00958-202ENST00000526388 HDGFL1Q5TGJ6 251 aa10.19□□□□□ -0.78
LINC00958-202ENST00000526388 CC2D2BQ6DHV5 1058 aa10.19□□□□□ -0.78
LINC00958-202ENST00000526388 COPS6Q7L5N1 327 aa10.19□□□□□ -0.78
LINC00958-202ENST00000526388 TMC2Q8TDI7 906 aa10.19□□□□□ -0.78
LINC00958-202ENST00000526388 RBM17Q96I25 401 aaKnown RBP10.19□□□□□ -0.78
LINC00958-202ENST00000526388 CRAMP1Q96RY5 1269 aa10.19□□□□□ -0.78
LINC00958-202ENST00000526388 DDX21Q9NR30 783 aaKnown RBP eCLIP10.19□□□□□ -0.78
LINC00958-202ENST00000526388 TRPM7Q96QT4 1865 aa10.19□□□□□ -0.78
LINC00958-202ENST00000526388 DUOX1Q9NRD9 1551 aa10.18□□□□□ -0.78
LINC00958-202ENST00000526388 MYH3P11055 1940 aa10.18□□□□□ -0.78
LINC00958-202ENST00000526388 TCERG1O14776 1098 aaKnown RBP10.18□□□□□ -0.78
LINC00958-202ENST00000526388 HOXB7P09629 217 aa10.18□□□□□ -0.78
LINC00958-202ENST00000526388 NLRP10Q86W26 655 aa10.18□□□□□ -0.78
LINC00958-202ENST00000526388 LDHDQ86WU2 507 aa10.18□□□□□ -0.78
LINC00958-202ENST00000526388 JMYQ8N9B5 988 aa10.18□□□□□ -0.78
LINC00958-202ENST00000526388 JDP2Q8WYK2 163 aa10.18□□□□□ -0.78
LINC00958-202ENST00000526388 NLRP3Q96P20 1036 aa10.18□□□□□ -0.78
LINC00958-202ENST00000526388 TAF1DQ9H5J8 278 aaPredicted RBP10.18□□□□□ -0.78
LINC00958-202ENST00000526388 HACL1Q9UJ83 578 aa10.18□□□□□ -0.78
LINC00958-202ENST00000526388 SPEF2Q9C093 1822 aa10.18□□□□□ -0.78
LINC00958-202ENST00000526388 FZD9O00144 591 aa10.17□□□□□ -0.78
LINC00958-202ENST00000526388 GRIPAP1Q4V328 841 aa10.17□□□□□ -0.78
LINC00958-202ENST00000526388 EAPPQ56P03 285 aaPredicted RBP10.17□□□□□ -0.78
LINC00958-202ENST00000526388 GPC2Q8N158 579 aa10.17□□□□□ -0.78
LINC00958-202ENST00000526388 LARGE2Q8N3Y3 721 aa10.17□□□□□ -0.78
LINC00958-202ENST00000526388 TMX4Q9H1E5 349 aaPredicted RBP10.17□□□□□ -0.78
LINC00958-202ENST00000526388 TRMT112Q9UI30 125 aaKnown RBP10.17□□□□□ -0.78
LINC00958-202ENST00000526388 COL4A1P02462 1669 aa10.16□□□□□ -0.78
LINC00958-202ENST00000526388 SH3TC1Q8TE82 1336 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms