RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 ALDH1A1P00352 501 aa5.11□□□□□ -1.59
SCARNA13-201ENST00000516672 DSG3P32926 999 aa5.11□□□□□ -1.59
SCARNA13-201ENST00000516672 HIRAP54198 1017 aaPredicted RBP5.11□□□□□ -1.59
SCARNA13-201ENST00000516672 SMAD3P84022 425 aaKnown RBP5.11□□□□□ -1.59
SCARNA13-201ENST00000516672 ITPK1Q13572 414 aa5.11□□□□□ -1.59
SCARNA13-201ENST00000516672 PUM1Q14671 1186 aaKnown RBP eCLIP5.11□□□□□ -1.59
SCARNA13-201ENST00000516672 SOGA3Q5TF21 947 aa5.11□□□□□ -1.59
SCARNA13-201ENST00000516672 TMEM132EQ6IEE7 984 aa5.11□□□□□ -1.59
SCARNA13-201ENST00000516672 ATOH1Q92858 354 aaPredicted RBP5.11□□□□□ -1.59
SCARNA13-201ENST00000516672 MFSD14AQ96MC6 490 aa5.11□□□□□ -1.59
SCARNA13-201ENST00000516672 GAS2L1Q99501 681 aaPredicted RBP5.11□□□□□ -1.59
SCARNA13-201ENST00000516672 FAM205AQ6ZU69 1335 aa5.11□□□□□ -1.59
SCARNA13-201ENST00000516672 COL1A1P02452 1464 aaPredicted RBP5.11□□□□□ -1.59
SCARNA13-201ENST00000516672 KIF1BO60333 1816 aa5.11□□□□□ -1.59
SCARNA13-201ENST00000516672 PLXNA3P51805 1871 aa5.11□□□□□ -1.59
SCARNA13-201ENST00000516672 LRRC37A2A6NM11 1700 aa5.1□□□□□ -1.59
SCARNA13-201ENST00000516672 TLL1O43897 1013 aa5.1□□□□□ -1.59
SCARNA13-201ENST00000516672 CCL5P13501 91 aa5.1□□□□□ -1.59
SCARNA13-201ENST00000516672 ALADP13716 330 aa5.1□□□□□ -1.59
SCARNA13-201ENST00000516672 PTPRZ1P23471 2315 aaPredicted RBP5.1□□□□□ -1.59
SCARNA13-201ENST00000516672 TM4SF1P30408 202 aa5.1□□□□□ -1.59
SCARNA13-201ENST00000516672 SP3Q02447 781 aa5.1□□□□□ -1.59
SCARNA13-201ENST00000516672 FKBP4Q02790 459 aaKnown RBP eCLIP5.1□□□□□ -1.59
SCARNA13-201ENST00000516672 PIK3R5Q8WYR1 880 aa5.1□□□□□ -1.59
SCARNA13-201ENST00000516672 SMARCC1Q92922 1105 aaPredicted RBP5.1□□□□□ -1.59
SCARNA13-201ENST00000516672 PAWRQ96IZ0 340 aaKnown RBP5.1□□□□□ -1.59
SCARNA13-201ENST00000516672 RNF208Q9H0X6 261 aa5.1□□□□□ -1.59
SCARNA13-201ENST00000516672 GPRC5DQ9NZD1 345 aa5.1□□□□□ -1.59
SCARNA13-201ENST00000516672 SRP68Q9UHB9 627 aaKnown RBP5.1□□□□□ -1.59
SCARNA13-201ENST00000516672 LOC102724428A0A0B4J2F2 783 aa5.09□□□□□ -1.59
SCARNA13-201ENST00000516672 ADM5C9JUS6 153 aa5.09□□□□□ -1.59
SCARNA13-201ENST00000516672 PROB1E7EW31 1015 aa5.09□□□□□ -1.59
SCARNA13-201ENST00000516672 IARSP41252 1262 aaKnown RBP5.09□□□□□ -1.59
SCARNA13-201ENST00000516672 SIK1P57059 783 aa5.09□□□□□ -1.59
SCARNA13-201ENST00000516672 COL9A3Q14050 684 aaPredicted RBP5.09□□□□□ -1.59
SCARNA13-201ENST00000516672 MPRIPQ6WCQ1 1025 aa5.09□□□□□ -1.59
SCARNA13-201ENST00000516672 SIRT1Q96EB6 747 aa5.09□□□□□ -1.59
SCARNA13-201ENST00000516672 PRRX2Q99811 253 aa5.09□□□□□ -1.59
SCARNA13-201ENST00000516672 FBN3Q75N90 2809 aa5.09□□□□□ -1.6
SCARNA13-201ENST00000516672 CACNA1SQ13698 1873 aa5.09□□□□□ -1.6
SCARNA13-201ENST00000516672 COL5A3P25940 1745 aaPredicted RBP5.09□□□□□ -1.6
SCARNA13-201ENST00000516672 EIF3AQ14152 1382 aaKnown RBP5.08□□□□□ -1.6
SCARNA13-201ENST00000516672 CARMIL3Q8ND23 1372 aa5.08□□□□□ -1.6
SCARNA13-201ENST00000516672 RAB3GAP2Q9H2M9 1393 aa5.08□□□□□ -1.6
SCARNA13-201ENST00000516672 SGPL1O95470 568 aa5.08□□□□□ -1.6
SCARNA13-201ENST00000516672 DMWDQ09019 674 aa5.08□□□□□ -1.6
SCARNA13-201ENST00000516672 KRT26Q7Z3Y9 468 aa5.08□□□□□ -1.6
SCARNA13-201ENST00000516672 ARHGEF25Q86VW2 580 aa5.08□□□□□ -1.6
SCARNA13-201ENST00000516672 ADSSL1Q8N142 457 aa5.08□□□□□ -1.6
SCARNA13-201ENST00000516672 JDP2Q8WYK2 163 aa5.08□□□□□ -1.6
SCARNA13-201ENST00000516672 MAP2P11137 1827 aaKnown RBP5.07□□□□□ -1.6
SCARNA13-201ENST00000516672 AFDNP55196 1824 aaKnown RBP5.07□□□□□ -1.6
SCARNA13-201ENST00000516672 SHTN1A0MZ66 631 aa5.07□□□□□ -1.6
SCARNA13-201ENST00000516672 ATP6V1AP38606 617 aa5.07□□□□□ -1.6
SCARNA13-201ENST00000516672 ARHGEF6Q15052 776 aa5.07□□□□□ -1.6
SCARNA13-201ENST00000516672 CCDC93Q567U6 631 aa5.07□□□□□ -1.6
SCARNA13-201ENST00000516672 PRPF40BQ6NWY9 871 aaKnown RBP5.07□□□□□ -1.6
SCARNA13-201ENST00000516672 NECAB2Q7Z6G3 386 aa5.07□□□□□ -1.6
SCARNA13-201ENST00000516672 DIS3LQ8TF46 1054 aaKnown RBP5.07□□□□□ -1.6
SCARNA13-201ENST00000516672 PRAM1Q96QH2 718 aa5.07□□□□□ -1.6
SCARNA13-201ENST00000516672 SPEGQ15772 3267 aa5.07□□□□□ -1.6
SCARNA13-201ENST00000516672 DMXL1Q9Y485 3027 aa5.07□□□□□ -1.6
SCARNA13-201ENST00000516672 MYO18BQ8IUG5 2567 aa5.07□□□□□ -1.6
SCARNA13-201ENST00000516672 SLX4Q8IY92 1834 aa5.07□□□□□ -1.6
SCARNA13-201ENST00000516672 DOPEY1Q5JWR5 2465 aa5.06□□□□□ -1.6
SCARNA13-201ENST00000516672 KIF24Q5T7B8 1368 aa5.06□□□□□ -1.6
SCARNA13-201ENST00000516672 TFRCP02786 760 aaKnown RBP5.06□□□□□ -1.6
SCARNA13-201ENST00000516672 ADRB1P08588 477 aa5.06□□□□□ -1.6
SCARNA13-201ENST00000516672 LRRC41Q15345 812 aa5.06□□□□□ -1.6
SCARNA13-201ENST00000516672 SHHQ15465 462 aa5.06□□□□□ -1.6
SCARNA13-201ENST00000516672 LRSAM1Q6UWE0 723 aa5.06□□□□□ -1.6
SCARNA13-201ENST00000516672 ZNF576Q9H609 170 aa5.06□□□□□ -1.6
SCARNA13-201ENST00000516672 ZFYVE26Q68DK2 2539 aa5.06□□□□□ -1.6
SCARNA13-201ENST00000516672 COL11A2P13942 1736 aaPredicted RBP5.06□□□□□ -1.6
SCARNA13-201ENST00000516672 NRXN2Q9P2S2 1712 aa5.06□□□□□ -1.6
SCARNA13-201ENST00000516672 USP42Q9H9J4 1324 aaKnown RBP5.05□□□□□ -1.6
SCARNA13-201ENST00000516672 ERC2O15083 957 aa5.05□□□□□ -1.6
SCARNA13-201ENST00000516672 IGFBP4P22692 258 aa5.05□□□□□ -1.6
SCARNA13-201ENST00000516672 EIF5P55010 431 aaKnown RBP5.05□□□□□ -1.6
SCARNA13-201ENST00000516672 NLRP6P59044 892 aa5.05□□□□□ -1.6
SCARNA13-201ENST00000516672 CRHR2Q13324 411 aa5.05□□□□□ -1.6
SCARNA13-201ENST00000516672 ADGRE1Q14246 886 aa5.05□□□□□ -1.6
SCARNA13-201ENST00000516672 IFNL1Q8IU54 200 aa5.05□□□□□ -1.6
SCARNA13-201ENST00000516672 ZBTB38Q8NAP3 1195 aaPredicted RBP5.05□□□□□ -1.6
SCARNA13-201ENST00000516672 PRDM12Q9H4Q4 367 aa5.05□□□□□ -1.6
SCARNA13-201ENST00000516672 KCNK4Q9NYG8 393 aa5.05□□□□□ -1.6
SCARNA13-201ENST00000516672 WASLO00401 505 aaPredicted RBP5.04□□□□□ -1.6
SCARNA13-201ENST00000516672 RPS6KA4O75676 772 aa5.04□□□□□ -1.6
SCARNA13-201ENST00000516672 SERPINB2P05120 415 aa5.04□□□□□ -1.6
SCARNA13-201ENST00000516672 RIPPLY3P57055 190 aa5.04□□□□□ -1.6
SCARNA13-201ENST00000516672 C9orf50Q5SZB4 431 aa5.04□□□□□ -1.6
SCARNA13-201ENST00000516672 MOB2Q70IA6 237 aa5.04□□□□□ -1.6
SCARNA13-201ENST00000516672 TMC4Q7Z404 712 aa5.04□□□□□ -1.6
SCARNA13-201ENST00000516672 NUTM1Q86Y26 1132 aa5.04□□□□□ -1.6
SCARNA13-201ENST00000516672 SP8Q8IXZ3 490 aa5.04□□□□□ -1.6
SCARNA13-201ENST00000516672 GJD3Q8N144 294 aa5.04□□□□□ -1.6
SCARNA13-201ENST00000516672 ZCRB1Q8TBF4 217 aaKnown RBP5.04□□□□□ -1.6
SCARNA13-201ENST00000516672 CNKSR1Q969H4 720 aa5.04□□□□□ -1.6
SCARNA13-201ENST00000516672 RUNDC1Q96C34 613 aa5.04□□□□□ -1.6
SCARNA13-201ENST00000516672 IRF2BPLQ9H1B7 796 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms