RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 FOXO3O43524 673 aa2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 ATP1A2P50993 1020 aa2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 DHX9Q08211 1270 aaKnown RBP2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 NR5A1Q13285 461 aa2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 IFFO2Q5TF58 517 aa2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 KRT28Q7Z3Y7 464 aa2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 CCDC125Q86Z20 511 aa2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 TRMT44Q8IYL2 757 aaKnown RBP2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 SEPT12Q8IYM1 358 aa2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 OGFOD1Q8N543 542 aa2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 RETREG2Q8NC44 543 aa2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 NGDNQ8NEJ9 315 aaKnown RBP2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 SNIP1Q8TAD8 396 aaKnown RBP2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 PMFBP1Q8TBY8 1022 aa2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 LRRC59Q96AG4 307 aaKnown RBP2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 ZNF594Q96JF6 807 aaPredicted RBP2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 CCDC85AQ96PX6 553 aaPredicted RBP2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 HINFPQ9BQA5 517 aa2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 SLC12A5Q9H2X9 1139 aa2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 TMPRSS4Q9NRS4 437 aa2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 DNAAF2Q9NVR5 837 aaKnown RBP2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 PGPEP1Q9NXJ5 209 aa2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 NOVA2Q9UNW9 492 aaKnown RBP2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 TLL2Q9Y6L7 1015 aa2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 PHRF1Q9P1Y6 1649 aaKnown RBP2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 RGPD8O14715 1765 aaPredicted RBP2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 ANKRD26Q9UPS8 1709 aa2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 RTL1A6NKG5 1358 aa2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 PARD3Q8TEW0 1356 aa2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 PLEKHG2Q9H7P9 1386 aa2.99□□□□□ -1.93
SCARNA16.3-201ENST00000516595 NFAT5O94916 1531 aa2.98□□□□□ -1.93
SCARNA16.3-201ENST00000516595 ZBTB7CA1YPR0 619 aa2.98□□□□□ -1.93
SCARNA16.3-201ENST00000516595 TNFRSF10AO00220 468 aa2.98□□□□□ -1.93
SCARNA16.3-201ENST00000516595 ADH1CP00326 375 aa2.98□□□□□ -1.93
SCARNA16.3-201ENST00000516595 FSHRP23945 695 aa2.98□□□□□ -1.93
SCARNA16.3-201ENST00000516595 GRM5P41594 1212 aa2.98□□□□□ -1.93
SCARNA16.3-201ENST00000516595 MYT1Q01538 1121 aa2.98□□□□□ -1.93
SCARNA16.3-201ENST00000516595 NLRP13Q86W25 1043 aa2.98□□□□□ -1.93
SCARNA16.3-201ENST00000516595 PLEKHM2Q8IWE5 1019 aa2.98□□□□□ -1.93
SCARNA16.3-201ENST00000516595 KCNH5Q8NCM2 988 aa2.98□□□□□ -1.93
SCARNA16.3-201ENST00000516595 TMC1Q8TDI8 760 aa2.98□□□□□ -1.93
SCARNA16.3-201ENST00000516595 CDK15Q96Q40 435 aa2.98□□□□□ -1.93
SCARNA16.3-201ENST00000516595 C1QTNF2Q9BXJ5 285 aa2.98□□□□□ -1.93
SCARNA16.3-201ENST00000516595 PANK3Q9H999 370 aa2.98□□□□□ -1.93
SCARNA16.3-201ENST00000516595 CYLDQ9NQC7 956 aa2.98□□□□□ -1.93
SCARNA16.3-201ENST00000516595 KNSTRNQ9Y448 316 aa2.98□□□□□ -1.93
SCARNA16.3-201ENST00000516595 V9GY48 417 aaPredicted RBP2.98□□□□□ -1.93
SCARNA16.3-201ENST00000516595 ABCA3Q99758 1704 aa2.98□□□□□ -1.93
SCARNA16.3-201ENST00000516595 MARF1Q9Y4F3 1742 aaKnown RBP2.98□□□□□ -1.93
SCARNA16.3-201ENST00000516595 INSRP06213 1382 aa2.98□□□□□ -1.93
SCARNA16.3-201ENST00000516595 KIF20BQ96Q89 1820 aa2.98□□□□□ -1.93
SCARNA16.3-201ENST00000516595 CDK12Q9NYV4 1490 aaPredicted RBP2.97□□□□□ -1.93
SCARNA16.3-201ENST00000516595 BLMP54132 1417 aaPredicted RBP2.97□□□□□ -1.93
SCARNA16.3-201ENST00000516595 CARNS1A5YM72 827 aa2.97□□□□□ -1.93
SCARNA16.3-201ENST00000516595 USP17L15C9J2P7 530 aa2.97□□□□□ -1.93
SCARNA16.3-201ENST00000516595 USP17L10C9JJH3 530 aa2.97□□□□□ -1.93
SCARNA16.3-201ENST00000516595 USP17L13C9JLJ4 530 aa2.97□□□□□ -1.93
SCARNA16.3-201ENST00000516595 USP17L12C9JPN9 530 aa2.97□□□□□ -1.93
SCARNA16.3-201ENST00000516595 USP17L11C9JVI0 530 aa2.97□□□□□ -1.93
SCARNA16.3-201ENST00000516595 USP17L21D6R901 530 aa2.97□□□□□ -1.93
SCARNA16.3-201ENST00000516595 USP17L18D6R9N7 530 aa2.97□□□□□ -1.93
SCARNA16.3-201ENST00000516595 USP17L22D6RA61 530 aa2.97□□□□□ -1.93
SCARNA16.3-201ENST00000516595 USP17L17D6RBQ6 530 aa2.97□□□□□ -1.93
SCARNA16.3-201ENST00000516595 USP17L19D6RCP7 530 aa2.97□□□□□ -1.93
SCARNA16.3-201ENST00000516595 USP17L20D6RJB6 530 aa2.97□□□□□ -1.93
SCARNA16.3-201ENST00000516595 J3QL48 77 aa2.97□□□□□ -1.93
SCARNA16.3-201ENST00000516595 FYB1O15117 783 aa2.97□□□□□ -1.93
SCARNA16.3-201ENST00000516595 SIAH2O43255 324 aa2.97□□□□□ -1.93
SCARNA16.3-201ENST00000516595 ATG7O95352 703 aa2.97□□□□□ -1.93
SCARNA16.3-201ENST00000516595 HSPA1LP34931 641 aa2.97□□□□□ -1.93
SCARNA16.3-201ENST00000516595 GTF2IP78347 998 aa2.97□□□□□ -1.93
SCARNA16.3-201ENST00000516595 PIP4K2BP78356 416 aa2.97□□□□□ -1.93
SCARNA16.3-201ENST00000516595 USP17L24Q0WX57 530 aa2.97□□□□□ -1.93
SCARNA16.3-201ENST00000516595 DPYDQ12882 1025 aa2.97□□□□□ -1.93
SCARNA16.3-201ENST00000516595 NNTQ13423 1086 aa2.97□□□□□ -1.93
SCARNA16.3-201ENST00000516595 INTS6LQ5JSJ4 861 aaKnown RBP2.97□□□□□ -1.93
SCARNA16.3-201ENST00000516595 PPP1R26Q5T8A7 1209 aaPredicted RBP2.97□□□□□ -1.93
SCARNA16.3-201ENST00000516595 CCDC102BQ68D86 513 aa2.97□□□□□ -1.93
SCARNA16.3-201ENST00000516595 CC2D2BQ6DHV5 1058 aa2.97□□□□□ -1.93
SCARNA16.3-201ENST00000516595 TRAF7Q6Q0C0 670 aa2.97□□□□□ -1.93
SCARNA16.3-201ENST00000516595 CCDC116Q8IYX3 515 aa2.97□□□□□ -1.93
SCARNA16.3-201ENST00000516595 ABTB2Q8N961 1025 aa2.97□□□□□ -1.93
SCARNA16.3-201ENST00000516595 EMID1Q96A84 441 aaPredicted RBP2.97□□□□□ -1.93
SCARNA16.3-201ENST00000516595 COG3Q96JB2 828 aa2.97□□□□□ -1.93
SCARNA16.3-201ENST00000516595 MAP4K5Q9Y4K4 846 aa2.97□□□□□ -1.93
SCARNA16.3-201ENST00000516595 EMILIN1Q9Y6C2 1016 aa2.97□□□□□ -1.93
SCARNA16.3-201ENST00000516595 LMO7Q8WWI1 1683 aa2.97□□□□□ -1.93
SCARNA16.3-201ENST00000516595 SLIT2O94813 1529 aa2.97□□□□□ -1.93
SCARNA16.3-201ENST00000516595 LRP6O75581 1613 aa2.97□□□□□ -1.93
SCARNA16.3-201ENST00000516595 NCAPD2Q15021 1401 aa2.96□□□□□ -1.94
SCARNA16.3-201ENST00000516595 ESPNB1AK53 854 aa2.96□□□□□ -1.94
SCARNA16.3-201ENST00000516595 LGR5O75473 907 aa2.96□□□□□ -1.94
SCARNA16.3-201ENST00000516595 ZIC2O95409 532 aaPredicted RBP2.96□□□□□ -1.94
SCARNA16.3-201ENST00000516595 GCP02774 474 aa2.96□□□□□ -1.94
SCARNA16.3-201ENST00000516595 SCTRP47872 440 aa2.96□□□□□ -1.94
SCARNA16.3-201ENST00000516595 SEC13P55735 322 aa2.96□□□□□ -1.94
SCARNA16.3-201ENST00000516595 WDR4P57081 412 aaKnown RBP2.96□□□□□ -1.94
SCARNA16.3-201ENST00000516595 RALBP1Q15311 655 aa2.96□□□□□ -1.94
SCARNA16.3-201ENST00000516595 CRTC2Q53ET0 693 aaPredicted RBP2.96□□□□□ -1.94
SCARNA16.3-201ENST00000516595 ARHGEF25Q86VW2 580 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms