RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 RPS6KB1P23443 525 aa17.38■□□□□ 0.37
USP38-202ENST00000510377 TTC39AQ5SRH9 613 aa17.38■□□□□ 0.37
USP38-202ENST00000510377 AATKQ6ZMQ8 1374 aa17.38■□□□□ 0.37
USP38-202ENST00000510377 ABCC3O15438 1527 aa17.38■□□□□ 0.37
USP38-202ENST00000510377 SMTNL1A8MU46 457 aa17.38■□□□□ 0.37
USP38-202ENST00000510377 TULP1O00294 542 aaPredicted RBP17.37■□□□□ 0.37
USP38-202ENST00000510377 DHX16O60231 1041 aaKnown RBP17.37■□□□□ 0.37
USP38-202ENST00000510377 ATP10DQ9P241 1426 aa17.37■□□□□ 0.37
USP38-202ENST00000510377 IFIT1P09914 478 aaKnown RBP17.37■□□□□ 0.37
USP38-202ENST00000510377 OTUD7BQ6GQQ9 843 aa17.37■□□□□ 0.37
USP38-202ENST00000510377 CCDC82Q8N4S0 544 aa17.37■□□□□ 0.37
USP38-202ENST00000510377 EAF2Q96CJ1 260 aaPredicted RBP17.37■□□□□ 0.37
USP38-202ENST00000510377 CCDC34Q96HJ3 373 aa17.37■□□□□ 0.37
USP38-202ENST00000510377 SUCLG2Q96I99 432 aa17.37■□□□□ 0.37
USP38-202ENST00000510377 HMG20BQ9P0W2 317 aa17.37■□□□□ 0.37
USP38-202ENST00000510377 PPRC1Q5VV67 1664 aaKnown RBP17.37■□□□□ 0.37
USP38-202ENST00000510377 CTAGE5O15320 804 aa17.37■□□□□ 0.37
USP38-202ENST00000510377 SLC3A2P08195 630 aaKnown RBP17.37■□□□□ 0.37
USP38-202ENST00000510377 LMOD1P29536 600 aaPredicted RBP17.37■□□□□ 0.37
USP38-202ENST00000510377 KIAA1524Q8TCG1 905 aa17.37■□□□□ 0.37
USP38-202ENST00000510377 SKIDA1Q1XH10 827 aa17.36■□□□□ 0.37
USP38-202ENST00000510377 CCDC144CPQ8IYA2 1237 aa17.36■□□□□ 0.37
USP38-202ENST00000510377 LINS1Q8NG48 757 aa17.36■□□□□ 0.37
USP38-202ENST00000510377 SSH2Q76I76 1423 aa17.36■□□□□ 0.37
USP38-202ENST00000510377 A0A1B0GVL5 298 aa17.36■□□□□ 0.37
USP38-202ENST00000510377 CLSTN2Q9H4D0 955 aa17.36■□□□□ 0.37
USP38-202ENST00000510377 NEO1Q92859 1461 aa17.36■□□□□ 0.37
USP38-202ENST00000510377 GOLGA8BA8MQT2 603 aa17.36■□□□□ 0.37
USP38-202ENST00000510377 TATP17735 454 aaPredicted RBP17.36■□□□□ 0.37
USP38-202ENST00000510377 AKAP17AQ02040 695 aaKnown RBP17.36■□□□□ 0.37
USP38-202ENST00000510377 PI4K2BQ8TCG2 481 aa17.36■□□□□ 0.37
USP38-202ENST00000510377 ZSCAN16Q9H4T2 348 aaPredicted RBP17.36■□□□□ 0.37
USP38-202ENST00000510377 PTPDC1A2A3K4 754 aa17.36■□□□□ 0.37
USP38-202ENST00000510377 ALDH1L1O75891 902 aa17.36■□□□□ 0.37
USP38-202ENST00000510377 TFCP2Q12800 502 aa17.36■□□□□ 0.37
USP38-202ENST00000510377 HSP90AB3PQ58FF7 597 aa17.36■□□□□ 0.37
USP38-202ENST00000510377 ZSCAN25Q6NSZ9 544 aa17.36■□□□□ 0.37
USP38-202ENST00000510377 CEP126Q9P2H0 1117 aa17.36■□□□□ 0.37
USP38-202ENST00000510377 MRVI1Q9Y6F6 885 aa17.36■□□□□ 0.37
USP38-202ENST00000510377 SAFBQ15424 915 aaKnown RBP eCLIP17.35■□□□□ 0.37
USP38-202ENST00000510377 ZSWIM6Q9HCJ5 1215 aa17.35■□□□□ 0.37
USP38-202ENST00000510377 SBNO1A3KN83 1393 aa17.35■□□□□ 0.37
USP38-202ENST00000510377 SETBP1Q9Y6X0 1596 aa17.35■□□□□ 0.37
USP38-202ENST00000510377 MARCKSP29966 332 aaPredicted RBP17.35■□□□□ 0.37
USP38-202ENST00000510377 CCDC158Q5M9N0 1113 aa17.35■□□□□ 0.37
USP38-202ENST00000510377 TLR7Q9NYK1 1049 aaKnown RBP17.35■□□□□ 0.37
USP38-202ENST00000510377 ORC3Q9UBD5 711 aaPredicted RBP17.35■□□□□ 0.37
USP38-202ENST00000510377 CABP4P57796 275 aa17.35■□□□□ 0.37
USP38-202ENST00000510377 EIF4A1P60842 406 aaKnown RBP17.35■□□□□ 0.37
USP38-202ENST00000510377 SEC62Q99442 399 aaKnown RBP17.35■□□□□ 0.37
USP38-202ENST00000510377 ADAMTS2O95450 1211 aa17.34■□□□□ 0.37
USP38-202ENST00000510377 KCNA6P17658 529 aa17.34■□□□□ 0.37
USP38-202ENST00000510377 BEND3Q5T5X7 828 aa17.34■□□□□ 0.37
USP38-202ENST00000510377 ZSWIM4Q9H7M6 989 aa17.34■□□□□ 0.37
USP38-202ENST00000510377 DNAI1Q9UI46 699 aa17.34■□□□□ 0.37
USP38-202ENST00000510377 CDK12Q9NYV4 1490 aaPredicted RBP17.34■□□□□ 0.37
USP38-202ENST00000510377 KRT222Q8N1A0 295 aa17.34■□□□□ 0.37
USP38-202ENST00000510377 IFNKQ9P0W0 207 aa17.34■□□□□ 0.37
USP38-202ENST00000510377 NAA30Q147X3 362 aaPredicted RBP17.33■□□□□ 0.37
USP38-202ENST00000510377 PROSER3Q2NL68 480 aa17.33■□□□□ 0.37
USP38-202ENST00000510377 TMCO3Q6UWJ1 677 aa17.33■□□□□ 0.37
USP38-202ENST00000510377 ADGRB1O14514 1584 aa17.33■□□□□ 0.37
USP38-202ENST00000510377 ATP7BP35670 1465 aa17.33■□□□□ 0.37
USP38-202ENST00000510377 NEMFO60524 1076 aa17.33■□□□□ 0.36
USP38-202ENST00000510377 GPS2Q13227 327 aa17.33■□□□□ 0.36
USP38-202ENST00000510377 MCMDC2Q4G0Z9 681 aa17.33■□□□□ 0.36
USP38-202ENST00000510377 AMOTQ4VCS5 1084 aa17.33■□□□□ 0.36
USP38-202ENST00000510377 NBPF6Q5VWK0 638 aa17.33■□□□□ 0.36
USP38-202ENST00000510377 LMBR1LQ6UX01 489 aa17.33■□□□□ 0.36
USP38-202ENST00000510377 SYT10Q6XYQ8 523 aa17.33■□□□□ 0.36
USP38-202ENST00000510377 GOLGA6L1Q8N7Z2 621 aa17.33■□□□□ 0.36
USP38-202ENST00000510377 NBPF4Q96M43 638 aa17.33■□□□□ 0.36
USP38-202ENST00000510377 DBNDD2Q9BQY9 259 aa17.33■□□□□ 0.36
USP38-202ENST00000510377 FTOQ9C0B1 505 aaKnown RBP eCLIP17.33■□□□□ 0.36
USP38-202ENST00000510377 ZBTB3Q9H5J0 574 aa17.33■□□□□ 0.36
USP38-202ENST00000510377 ANKRD13DQ6ZTN6 518 aa17.33■□□□□ 0.36
USP38-202ENST00000510377 GTPBP4Q9BZE4 634 aaKnown RBP17.33■□□□□ 0.36
USP38-202ENST00000510377 HOOK1Q9UJC3 728 aaKnown RBP17.33■□□□□ 0.36
USP38-202ENST00000510377 ELF2Q15723 593 aa17.32■□□□□ 0.36
USP38-202ENST00000510377 IDH1O75874 414 aaKnown RBP17.32■□□□□ 0.36
USP38-202ENST00000510377 GTF2F1P35269 517 aaKnown RBP eCLIP17.32■□□□□ 0.36
USP38-202ENST00000510377 IMMTQ16891 758 aaKnown RBP17.32■□□□□ 0.36
USP38-202ENST00000510377 MRPS27Q92552 414 aaKnown RBP17.32■□□□□ 0.36
USP38-202ENST00000510377 TPM1P09493 284 aa17.32■□□□□ 0.36
USP38-202ENST00000510377 ATP2B3Q16720 1220 aa17.32■□□□□ 0.36
USP38-202ENST00000510377 CCDC57Q2TAC2 916 aa17.32■□□□□ 0.36
USP38-202ENST00000510377 TOM1L2Q6ZVM7 507 aa17.32■□□□□ 0.36
USP38-202ENST00000510377 JMYQ8N9B5 988 aa17.32■□□□□ 0.36
USP38-202ENST00000510377 ANKRD24Q8TF21 1146 aa17.32■□□□□ 0.36
USP38-202ENST00000510377 TM6SF1Q9BZW5 370 aa17.32■□□□□ 0.36
USP38-202ENST00000510377 CPSF1Q10570 1443 aaKnown RBP17.31■□□□□ 0.36
USP38-202ENST00000510377 PLEKHG3A1L390 1219 aa17.31■□□□□ 0.36
USP38-202ENST00000510377 PRAMEF22A3QJZ6 481 aa17.31■□□□□ 0.36
USP38-202ENST00000510377 GSDMDP57764 484 aa17.31■□□□□ 0.36
USP38-202ENST00000510377 KLF18A0A0U1RQI7 1052 aa17.31■□□□□ 0.36
USP38-202ENST00000510377 SLU7O95391 586 aaKnown RBP17.31■□□□□ 0.36
USP38-202ENST00000510377 HMGB1P09429 215 aaKnown RBP17.31■□□□□ 0.36
USP38-202ENST00000510377 TOP1P11387 765 aaKnown RBP17.31■□□□□ 0.36
USP38-202ENST00000510377 KLHL10Q6JEL2 608 aa17.31■□□□□ 0.36
USP38-202ENST00000510377 KCNH5Q8NCM2 988 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms