RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 TCIRG1Q13488 830 aa8.76□□□□□ -1.01
PDGFC-203ENST00000502773 ZNF526Q8TF50 670 aaPredicted RBP8.76□□□□□ -1.01
PDGFC-203ENST00000502773 MAP4K1Q92918 833 aa8.76□□□□□ -1.01
PDGFC-203ENST00000502773 ZNF396Q96N95 335 aaPredicted RBP8.76□□□□□ -1.01
PDGFC-203ENST00000502773 SNRKQ9NRH2 765 aa8.76□□□□□ -1.01
PDGFC-203ENST00000502773 SNX14Q9Y5W7 946 aa8.76□□□□□ -1.01
PDGFC-203ENST00000502773 ANKRD18BA2A2Z9 1011 aa8.76□□□□□ -1.01
PDGFC-203ENST00000502773 STX6O43752 255 aa8.76□□□□□ -1.01
PDGFC-203ENST00000502773 TPM2P07951 284 aa8.76□□□□□ -1.01
PDGFC-203ENST00000502773 ZSCAN22P10073 491 aaPredicted RBP8.76□□□□□ -1.01
PDGFC-203ENST00000502773 PRPF40BQ6NWY9 871 aaKnown RBP8.76□□□□□ -1.01
PDGFC-203ENST00000502773 KCNB2Q92953 911 aa8.76□□□□□ -1.01
PDGFC-203ENST00000502773 MAP7D2Q96T17 732 aa8.76□□□□□ -1.01
PDGFC-203ENST00000502773 DSCC1Q9BVC3 393 aa8.76□□□□□ -1.01
PDGFC-203ENST00000502773 RBM8AQ9Y5S9 174 aaKnown RBP8.76□□□□□ -1.01
PDGFC-203ENST00000502773 PCCAP05165 728 aaPredicted RBP8.76□□□□□ -1.01
PDGFC-203ENST00000502773 IFIT1P09914 478 aaKnown RBP8.76□□□□□ -1.01
PDGFC-203ENST00000502773 UBE2HP62256 183 aa8.76□□□□□ -1.01
PDGFC-203ENST00000502773 HAUS7Q99871 368 aa8.76□□□□□ -1.01
PDGFC-203ENST00000502773 BOLA2Q9H3K6 86 aa8.76□□□□□ -1.01
PDGFC-203ENST00000502773 ERVV-1B6SEH8 477 aa8.76□□□□□ -1.01
PDGFC-203ENST00000502773 CYP27B1O15528 508 aa8.76□□□□□ -1.01
PDGFC-203ENST00000502773 ANXA1P04083 346 aa8.76□□□□□ -1.01
PDGFC-203ENST00000502773 PARP10Q53GL7 1025 aa8.76□□□□□ -1.01
PDGFC-203ENST00000502773 LMBR1LQ6UX01 489 aa8.76□□□□□ -1.01
PDGFC-203ENST00000502773 KBTBD3Q8NAB2 608 aa8.76□□□□□ -1.01
PDGFC-203ENST00000502773 CCDC8Q9H0W5 538 aaPredicted RBP8.76□□□□□ -1.01
PDGFC-203ENST00000502773 TSPY26PQ9H489 355 aa8.76□□□□□ -1.01
PDGFC-203ENST00000502773 LARP1BQ659C4 914 aaKnown RBP8.75□□□□□ -1.01
PDGFC-203ENST00000502773 CREB3L3Q68CJ9 461 aa8.75□□□□□ -1.01
PDGFC-203ENST00000502773 NEK1Q96PY6 1258 aa8.75□□□□□ -1.01
PDGFC-203ENST00000502773 RBM42Q9BTD8 480 aaKnown RBP8.75□□□□□ -1.01
PDGFC-203ENST00000502773 PLA2G12BQ9BX93 195 aa8.75□□□□□ -1.01
PDGFC-203ENST00000502773 SIL1Q9H173 461 aa8.75□□□□□ -1.01
PDGFC-203ENST00000502773 GNL3LQ9NVN8 582 aaKnown RBP8.75□□□□□ -1.01
PDGFC-203ENST00000502773 CCDC39Q9UFE4 941 aa8.75□□□□□ -1.01
PDGFC-203ENST00000502773 ALS2Q96Q42 1657 aa8.75□□□□□ -1.01
PDGFC-203ENST00000502773 RGL2O15211 777 aa8.75□□□□□ -1.01
PDGFC-203ENST00000502773 CDKL5O76039 1030 aa8.75□□□□□ -1.01
PDGFC-203ENST00000502773 IMMTQ16891 758 aaKnown RBP8.75□□□□□ -1.01
PDGFC-203ENST00000502773 CCDC183Q5T5S1 534 aa8.75□□□□□ -1.01
PDGFC-203ENST00000502773 CYP2E1P05181 493 aaPredicted RBP8.75□□□□□ -1.01
PDGFC-203ENST00000502773 IRX3P78415 501 aaPredicted RBP8.75□□□□□ -1.01
PDGFC-203ENST00000502773 RALYLQ86SE5 291 aaKnown RBP8.75□□□□□ -1.01
PDGFC-203ENST00000502773 CDHR2Q9BYE9 1310 aa8.75□□□□□ -1.01
PDGFC-203ENST00000502773 PDIA6Q15084 440 aa8.74□□□□□ -1.01
PDGFC-203ENST00000502773 CAVIN1Q6NZI2 390 aaKnown RBP8.74□□□□□ -1.01
PDGFC-203ENST00000502773 SYNE3Q6ZMZ3 975 aa8.74□□□□□ -1.01
PDGFC-203ENST00000502773 USP16Q9Y5T5 823 aa8.74□□□□□ -1.01
PDGFC-203ENST00000502773 PXDNQ92626 1479 aa8.74□□□□□ -1.01
PDGFC-203ENST00000502773 NRDCO43847 1150 aa8.74□□□□□ -1.01
PDGFC-203ENST00000502773 IGKV5-2P06315 115 aa8.74□□□□□ -1.01
PDGFC-203ENST00000502773 NT5C2P49902 561 aa8.74□□□□□ -1.01
PDGFC-203ENST00000502773 KIAA2012Q0VF49 1180 aa8.74□□□□□ -1.01
PDGFC-203ENST00000502773 NMIQ13287 307 aaPredicted RBP8.74□□□□□ -1.01
PDGFC-203ENST00000502773 DNAJC2Q99543 621 aaKnown RBP8.74□□□□□ -1.01
PDGFC-203ENST00000502773 PARP4Q9UKK3 1724 aaKnown RBP8.74□□□□□ -1.01
PDGFC-203ENST00000502773 LRSAM1Q6UWE0 723 aa8.74□□□□□ -1.01
PDGFC-203ENST00000502773 EAF2Q96CJ1 260 aaPredicted RBP8.74□□□□□ -1.01
PDGFC-203ENST00000502773 SH3TC1Q8TE82 1336 aa8.74□□□□□ -1.01
PDGFC-203ENST00000502773 CTAGE5O15320 804 aa8.73□□□□□ -1.01
PDGFC-203ENST00000502773 RNF113AO15541 343 aaKnown RBP8.73□□□□□ -1.01
PDGFC-203ENST00000502773 ZBTB38Q8NAP3 1195 aaPredicted RBP8.73□□□□□ -1.01
PDGFC-203ENST00000502773 TMEM87AQ8NBN3 555 aa8.73□□□□□ -1.01
PDGFC-203ENST00000502773 CABLES1Q8TDN4 633 aa8.73□□□□□ -1.01
PDGFC-203ENST00000502773 CNNM1Q9NRU3 951 aa8.73□□□□□ -1.01
PDGFC-203ENST00000502773 PAG1Q9NWQ8 432 aa8.73□□□□□ -1.01
PDGFC-203ENST00000502773 KDM6AO15550 1401 aaPredicted RBP8.73□□□□□ -1.01
PDGFC-203ENST00000502773 AK2P54819 239 aa8.73□□□□□ -1.01
PDGFC-203ENST00000502773 PROSER3Q2NL68 480 aa8.73□□□□□ -1.01
PDGFC-203ENST00000502773 CDC5LQ99459 802 aaKnown RBP8.73□□□□□ -1.01
PDGFC-203ENST00000502773 UPF3BQ9BZI7 483 aaKnown RBP8.73□□□□□ -1.01
PDGFC-203ENST00000502773 NACAP1Q9BZK3 213 aa8.73□□□□□ -1.01
PDGFC-203ENST00000502773 R3HCC1Q9Y3T6 440 aaKnown RBP8.73□□□□□ -1.01
PDGFC-203ENST00000502773 MARF1Q9Y4F3 1742 aaKnown RBP8.73□□□□□ -1.01
PDGFC-203ENST00000502773 RPS6KB1P23443 525 aa8.73□□□□□ -1.01
PDGFC-203ENST00000502773 TPM4P67936 248 aa8.73□□□□□ -1.01
PDGFC-203ENST00000502773 CGNQ9P2M7 1197 aaKnown RBP8.73□□□□□ -1.01
PDGFC-203ENST00000502773 PA2G4Q9UQ80 394 aaKnown RBP8.73□□□□□ -1.01
PDGFC-203ENST00000502773 MAP4K4O95819 1239 aaPredicted RBP8.72□□□□□ -1.01
PDGFC-203ENST00000502773 IL6STP40189 918 aaPredicted RBP8.72□□□□□ -1.01
PDGFC-203ENST00000502773 TFCP2Q12800 502 aa8.72□□□□□ -1.01
PDGFC-203ENST00000502773 SART3Q15020 963 aaKnown RBP8.72□□□□□ -1.01
PDGFC-203ENST00000502773 NECTIN1Q15223 517 aa8.72□□□□□ -1.01
PDGFC-203ENST00000502773 LMBRD1Q9NUN5 540 aa8.72□□□□□ -1.01
PDGFC-203ENST00000502773 SASH1O94885 1247 aa8.72□□□□□ -1.01
PDGFC-203ENST00000502773 F13A1P00488 732 aa8.72□□□□□ -1.01
PDGFC-203ENST00000502773 SLC5A1P13866 664 aa8.72□□□□□ -1.01
PDGFC-203ENST00000502773 PTPN12Q05209 780 aaKnown RBP8.72□□□□□ -1.01
PDGFC-203ENST00000502773 NOL10Q9BSC4 688 aaKnown RBP8.72□□□□□ -1.01
PDGFC-203ENST00000502773 DDX19AQ9NUU7 478 aaKnown RBP8.72□□□□□ -1.01
PDGFC-203ENST00000502773 ADAMTS7Q9UKP4 1686 aa8.72□□□□□ -1.01
PDGFC-203ENST00000502773 ZNF330Q9Y3S2 320 aaPredicted RBP8.72□□□□□ -1.01
PDGFC-203ENST00000502773 MAP3K15Q6ZN16 1313 aa8.72□□□□□ -1.01
PDGFC-203ENST00000502773 SLC27A2O14975 620 aa8.72□□□□□ -1.01
PDGFC-203ENST00000502773 PTCD1O75127 700 aaKnown RBP8.72□□□□□ -1.01
PDGFC-203ENST00000502773 CCDC192P0DO97 292 aa8.72□□□□□ -1.01
PDGFC-203ENST00000502773 GNAT2P19087 354 aa8.72□□□□□ -1.01
PDGFC-203ENST00000502773 METTL24Q5JXM2 366 aa8.72□□□□□ -1.01
PDGFC-203ENST00000502773 GIGYF2Q6Y7W6 1299 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms