RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 RBM8AQ9Y5S9 174 aaKnown RBP17.74■□□□□ 0.43
CHTOP-206ENST00000495554 ATP5JP18859 108 aa17.73■□□□□ 0.43
CHTOP-206ENST00000495554 NASPP49321 788 aaPredicted RBP17.73■□□□□ 0.43
CHTOP-206ENST00000495554 TFCP2Q12800 502 aa17.73■□□□□ 0.43
CHTOP-206ENST00000495554 TNNI3KQ59H18 835 aa17.73■□□□□ 0.43
CHTOP-206ENST00000495554 CCDC191Q8NCU4 936 aa17.73■□□□□ 0.43
CHTOP-206ENST00000495554 PDRG1Q9NUG6 133 aa17.73■□□□□ 0.43
CHTOP-206ENST00000495554 FPGT-TNNI3KV9GXZ4 949 aa17.73■□□□□ 0.43
CHTOP-206ENST00000495554 COL22A1Q8NFW1 1626 aaPredicted RBP17.73■□□□□ 0.43
CHTOP-206ENST00000495554 KCNJ4P48050 445 aa17.73■□□□□ 0.43
CHTOP-206ENST00000495554 ADCK5Q3MIX3 580 aa17.73■□□□□ 0.43
CHTOP-206ENST00000495554 NAP1L2Q9ULW6 460 aaPredicted RBP17.73■□□□□ 0.43
CHTOP-206ENST00000495554 ITGB4P16144 1822 aa17.72■□□□□ 0.43
CHTOP-206ENST00000495554 CREB3L3Q68CJ9 461 aa17.72■□□□□ 0.43
CHTOP-206ENST00000495554 ZSCAN31Q96LW9 406 aaPredicted RBP17.72■□□□□ 0.43
CHTOP-206ENST00000495554 SLC4A9Q96Q91 983 aa17.72■□□□□ 0.43
CHTOP-206ENST00000495554 ISCA1Q9BUE6 129 aa17.72■□□□□ 0.43
CHTOP-206ENST00000495554 DBNLQ9UJU6 430 aaKnown RBP17.72■□□□□ 0.43
CHTOP-206ENST00000495554 TEX13AQ9BXU3 409 aaPredicted RBP17.72■□□□□ 0.43
CHTOP-206ENST00000495554 SH2B1Q9NRF2 756 aaPredicted RBP17.72■□□□□ 0.43
CHTOP-206ENST00000495554 LTBP4Q8N2S1 1624 aa17.71■□□□□ 0.43
CHTOP-206ENST00000495554 A0A0D9SFI3 127 aa17.71■□□□□ 0.43
CHTOP-206ENST00000495554 CPA1P15085 419 aa17.71■□□□□ 0.43
CHTOP-206ENST00000495554 RNF20Q5VTR2 975 aa17.71■□□□□ 0.43
CHTOP-206ENST00000495554 TJP1Q07157 1748 aa17.71■□□□□ 0.43
CHTOP-206ENST00000495554 RPAP1Q9BWH6 1393 aaPredicted RBP17.71■□□□□ 0.43
CHTOP-206ENST00000495554 BCL9O00512 1426 aa17.71■□□□□ 0.43
CHTOP-206ENST00000495554 EXOC5O00471 708 aa17.71■□□□□ 0.43
CHTOP-206ENST00000495554 PSMA5P28066 241 aa17.71■□□□□ 0.43
CHTOP-206ENST00000495554 ANP32BQ92688 251 aaKnown RBP17.71■□□□□ 0.43
CHTOP-206ENST00000495554 RRAGDQ9NQL2 400 aaPredicted RBP17.71■□□□□ 0.43
CHTOP-206ENST00000495554 SMC3Q9UQE7 1217 aa17.71■□□□□ 0.43
CHTOP-206ENST00000495554 MED23Q9ULK4 1368 aa17.7■□□□□ 0.42
CHTOP-206ENST00000495554 TCIRG1Q13488 830 aa17.7■□□□□ 0.42
CHTOP-206ENST00000495554 ATG9AQ7Z3C6 839 aa17.7■□□□□ 0.42
CHTOP-206ENST00000495554 LARP6Q9BRS8 491 aaKnown RBP17.7■□□□□ 0.42
CHTOP-206ENST00000495554 SLC27A2O14975 620 aa17.69■□□□□ 0.42
CHTOP-206ENST00000495554 TMEM63CQ9P1W3 806 aa17.69■□□□□ 0.42
CHTOP-206ENST00000495554 RBM27Q9P2N5 1060 aaKnown RBP17.69■□□□□ 0.42
CHTOP-206ENST00000495554 ZSCAN22P10073 491 aaPredicted RBP17.69■□□□□ 0.42
CHTOP-206ENST00000495554 CCDC173Q0VFZ6 552 aa17.69■□□□□ 0.42
CHTOP-206ENST00000495554 TRIM28Q13263 835 aaKnown RBP17.69■□□□□ 0.42
CHTOP-206ENST00000495554 TRIM44Q96DX7 344 aaPredicted RBP17.69■□□□□ 0.42
CHTOP-206ENST00000495554 STX6O43752 255 aa17.68■□□□□ 0.42
CHTOP-206ENST00000495554 NSFL1CQ9UNZ2 370 aaKnown RBP17.68■□□□□ 0.42
CHTOP-206ENST00000495554 RFX7Q2KHR2 1363 aa17.68■□□□□ 0.42
CHTOP-206ENST00000495554 KAT6BQ8WYB5 2073 aa17.68■□□□□ 0.42
CHTOP-206ENST00000495554 STARD3NLO95772 234 aa17.68■□□□□ 0.42
CHTOP-206ENST00000495554 SYT1P21579 422 aa17.68■□□□□ 0.42
CHTOP-206ENST00000495554 EDC3Q96F86 508 aaKnown RBP17.68■□□□□ 0.42
CHTOP-206ENST00000495554 DBNDD2Q9BQY9 259 aa17.68■□□□□ 0.42
CHTOP-206ENST00000495554 HMG20BQ9P0W2 317 aa17.68■□□□□ 0.42
CHTOP-206ENST00000495554 JCADQ9P266 1359 aa17.68■□□□□ 0.42
CHTOP-206ENST00000495554 ZNF330Q9Y3S2 320 aaPredicted RBP17.68■□□□□ 0.42
CHTOP-206ENST00000495554 LARGE1O95461 756 aa17.67■□□□□ 0.42
CHTOP-206ENST00000495554 CHMP3Q9Y3E7 222 aa17.67■□□□□ 0.42
CHTOP-206ENST00000495554 CYP19A1P11511 503 aaPredicted RBP17.67■□□□□ 0.42
CHTOP-206ENST00000495554 PRIM1P49642 420 aaKnown RBP17.67■□□□□ 0.42
CHTOP-206ENST00000495554 LRSAM1Q6UWE0 723 aa17.67■□□□□ 0.42
CHTOP-206ENST00000495554 PPP1R9BQ96SB3 815 aa17.67■□□□□ 0.42
CHTOP-206ENST00000495554 ATP6V1DQ9Y5K8 247 aa17.67■□□□□ 0.42
CHTOP-206ENST00000495554 ADAMTS2O95450 1211 aa17.66■□□□□ 0.42
CHTOP-206ENST00000495554 TSGA10IPQ3SY00 556 aa17.66■□□□□ 0.42
CHTOP-206ENST00000495554 ZNF589Q86UQ0 364 aaPredicted RBP17.66■□□□□ 0.42
CHTOP-206ENST00000495554 CCDC83Q8IWF9 413 aa17.66■□□□□ 0.42
CHTOP-206ENST00000495554 TMEM87AQ8NBN3 555 aa17.66■□□□□ 0.42
CHTOP-206ENST00000495554 SYAP1Q96A49 352 aaPredicted RBP17.66■□□□□ 0.42
CHTOP-206ENST00000495554 HAUS7Q99871 368 aa17.66■□□□□ 0.42
CHTOP-206ENST00000495554 TAOK2Q9UL54 1235 aa17.66■□□□□ 0.42
CHTOP-206ENST00000495554 PLCH1Q4KWH8 1693 aa17.66■□□□□ 0.42
CHTOP-206ENST00000495554 TAF5LO75529 589 aa17.66■□□□□ 0.42
CHTOP-206ENST00000495554 ANKRD1Q15327 319 aa17.66■□□□□ 0.42
CHTOP-206ENST00000495554 ZNF594Q96JF6 807 aaPredicted RBP17.66■□□□□ 0.42
CHTOP-206ENST00000495554 FOXD4L6Q3SYB3 417 aaPredicted RBP17.65■□□□□ 0.42
CHTOP-206ENST00000495554 BLOC1S2Q6QNY1 142 aa17.65■□□□□ 0.42
CHTOP-206ENST00000495554 FOXD4L3Q6VB84 417 aaPredicted RBP17.65■□□□□ 0.42
CHTOP-206ENST00000495554 USP48Q86UV5 1035 aa17.65■□□□□ 0.42
CHTOP-206ENST00000495554 ALDH8A1Q9H2A2 487 aaPredicted RBP17.65■□□□□ 0.42
CHTOP-206ENST00000495554 LRP6O75581 1613 aa17.65■□□□□ 0.42
CHTOP-206ENST00000495554 SYCE3A1L190 88 aa17.65■□□□□ 0.42
CHTOP-206ENST00000495554 GJB2P29033 226 aa17.65■□□□□ 0.42
CHTOP-206ENST00000495554 HLFQ16534 295 aa17.65■□□□□ 0.42
CHTOP-206ENST00000495554 ME3Q16798 604 aa17.65■□□□□ 0.42
CHTOP-206ENST00000495554 LRRC24Q50LG9 513 aa17.65■□□□□ 0.42
CHTOP-206ENST00000495554 USPL1Q5W0Q7 1092 aa17.65■□□□□ 0.42
CHTOP-206ENST00000495554 GPR108Q9NPR9 543 aa17.65■□□□□ 0.42
CHTOP-206ENST00000495554 NDUFB9Q9Y6M9 179 aa17.65■□□□□ 0.42
CHTOP-206ENST00000495554 SPATA31A1Q5TZJ5 1347 aa17.64■□□□□ 0.41
CHTOP-206ENST00000495554 RBSNQ9H1K0 784 aa17.64■□□□□ 0.41
CHTOP-206ENST00000495554 MAP3K15Q6ZN16 1313 aa17.64■□□□□ 0.41
CHTOP-206ENST00000495554 F13A1P00488 732 aa17.64■□□□□ 0.41
CHTOP-206ENST00000495554 IL15P40933 162 aaPredicted RBP17.64■□□□□ 0.41
CHTOP-206ENST00000495554 GIGYF2Q6Y7W6 1299 aaKnown RBP17.64■□□□□ 0.41
CHTOP-206ENST00000495554 SYTL4Q96C24 671 aaPredicted RBP17.64■□□□□ 0.41
CHTOP-206ENST00000495554 DNAJC2Q99543 621 aaKnown RBP17.64■□□□□ 0.41
CHTOP-206ENST00000495554 TPCN1Q9ULQ1 816 aa17.64■□□□□ 0.41
CHTOP-206ENST00000495554 EYA2O00167 538 aa17.63■□□□□ 0.41
CHTOP-206ENST00000495554 CLCN1P35523 988 aa17.63■□□□□ 0.41
CHTOP-206ENST00000495554 TIMM10P62072 90 aa17.63■□□□□ 0.41
CHTOP-206ENST00000495554 KRT32Q14532 448 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms