RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 HDAC5Q9UQL6 1122 aa14.93□□□□□ -0.02
HMGN1-220ENST00000492280 ZSCAN22P10073 491 aaPredicted RBP14.92□□□□□ -0.02
HMGN1-220ENST00000492280 SYNE4Q8N205 404 aa14.92□□□□□ -0.02
HMGN1-220ENST00000492280 PLBD2Q8NHP8 589 aa14.92□□□□□ -0.02
HMGN1-220ENST00000492280 ZSWIM6Q9HCJ5 1215 aa14.92□□□□□ -0.02
HMGN1-220ENST00000492280 DNM1Q05193 864 aaKnown RBP14.92□□□□□ -0.02
HMGN1-220ENST00000492280 PCDH11XQ9BZA7 1347 aa14.92□□□□□ -0.02
HMGN1-220ENST00000492280 PCDH11YQ9BZA8 1340 aa14.92□□□□□ -0.02
HMGN1-220ENST00000492280 ZNF609O15014 1411 aa14.92□□□□□ -0.02
HMGN1-220ENST00000492280 DCCP43146 1447 aa14.91□□□□□ -0.02
HMGN1-220ENST00000492280 GOLIM4O00461 696 aa14.91□□□□□ -0.02
HMGN1-220ENST00000492280 FOSBP53539 338 aa14.91□□□□□ -0.02
HMGN1-220ENST00000492280 COL5A2P05997 1499 aaPredicted RBP14.91□□□□□ -0.02
HMGN1-220ENST00000492280 MED23Q9ULK4 1368 aa14.91□□□□□ -0.02
HMGN1-220ENST00000492280 FOXO4P98177 505 aa14.91□□□□□ -0.02
HMGN1-220ENST00000492280 HSP90AB3PQ58FF7 597 aa14.91□□□□□ -0.02
HMGN1-220ENST00000492280 VPS53Q5VIR6 699 aa14.91□□□□□ -0.02
HMGN1-220ENST00000492280 LRSAM1Q6UWE0 723 aa14.91□□□□□ -0.02
HMGN1-220ENST00000492280 A0A0G2JS52 829 aa14.9□□□□□ -0.02
HMGN1-220ENST00000492280 F13A1P00488 732 aa14.9□□□□□ -0.02
HMGN1-220ENST00000492280 RABL6Q3YEC7 729 aaPredicted RBP14.9□□□□□ -0.02
HMGN1-220ENST00000492280 TAF5LO75529 589 aa14.9□□□□□ -0.02
HMGN1-220ENST00000492280 EVA1CP58658 441 aa14.9□□□□□ -0.02
HMGN1-220ENST00000492280 CDC37L1Q7L3B6 337 aa14.9□□□□□ -0.02
HMGN1-220ENST00000492280 SNRKQ9NRH2 765 aa14.9□□□□□ -0.02
HMGN1-220ENST00000492280 ASAP1Q9ULH1 1129 aa14.9□□□□□ -0.02
HMGN1-220ENST00000492280 CPDO75976 1380 aa14.89□□□□□ -0.03
HMGN1-220ENST00000492280 IL2RBP14784 551 aa14.89□□□□□ -0.03
HMGN1-220ENST00000492280 ATG9AQ7Z3C6 839 aa14.89□□□□□ -0.03
HMGN1-220ENST00000492280 NAP1L5Q96NT1 182 aaPredicted RBP14.89□□□□□ -0.03
HMGN1-220ENST00000492280 MTMR6Q9Y217 621 aa14.89□□□□□ -0.03
HMGN1-220ENST00000492280 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.89□□□□□ -0.03
HMGN1-220ENST00000492280 BLOC1S2Q6QNY1 142 aa14.89□□□□□ -0.03
HMGN1-220ENST00000492280 CWC25Q9NXE8 425 aaPredicted RBP14.89□□□□□ -0.03
HMGN1-220ENST00000492280 LMTK3Q96Q04 1460 aa14.88□□□□□ -0.03
HMGN1-220ENST00000492280 MBD3O95983 291 aa14.88□□□□□ -0.03
HMGN1-220ENST00000492280 GPTP24298 496 aa14.88□□□□□ -0.03
HMGN1-220ENST00000492280 CCDC173Q0VFZ6 552 aa14.88□□□□□ -0.03
HMGN1-220ENST00000492280 TOB2Q14106 344 aaPredicted RBP14.88□□□□□ -0.03
HMGN1-220ENST00000492280 ANP32BQ92688 251 aaKnown RBP14.88□□□□□ -0.03
HMGN1-220ENST00000492280 EPB41L2O43491 1005 aaKnown RBP14.88□□□□□ -0.03
HMGN1-220ENST00000492280 JAK2O60674 1132 aa14.88□□□□□ -0.03
HMGN1-220ENST00000492280 FAM89AQ96GI7 184 aa14.88□□□□□ -0.03
HMGN1-220ENST00000492280 LAMB4A4D0S4 1761 aa14.88□□□□□ -0.03
HMGN1-220ENST00000492280 ATP5JP18859 108 aa14.87□□□□□ -0.03
HMGN1-220ENST00000492280 CLCN1P35523 988 aa14.87□□□□□ -0.03
HMGN1-220ENST00000492280 DNAJC10Q8IXB1 793 aa14.87□□□□□ -0.03
HMGN1-220ENST00000492280 TJP1Q07157 1748 aa14.87□□□□□ -0.03
HMGN1-220ENST00000492280 CHST3Q7LGC8 479 aa14.87□□□□□ -0.03
HMGN1-220ENST00000492280 SYTL4Q96C24 671 aaPredicted RBP14.87□□□□□ -0.03
HMGN1-220ENST00000492280 KCPQ6ZWJ8 1503 aa14.87□□□□□ -0.03
HMGN1-220ENST00000492280 KDM4FA0A1W2PPD8 638 aa14.86□□□□□ -0.03
HMGN1-220ENST00000492280 PI16Q6UXB8 463 aa14.86□□□□□ -0.03
HMGN1-220ENST00000492280 DDX11Q96FC9 970 aa14.86□□□□□ -0.03
HMGN1-220ENST00000492280 H7C1W4 665 aa14.86□□□□□ -0.03
HMGN1-220ENST00000492280 CYP21A2P08686 494 aa14.86□□□□□ -0.03
HMGN1-220ENST00000492280 RPS6KB1P23443 525 aa14.86□□□□□ -0.03
HMGN1-220ENST00000492280 ADORA1P30542 326 aa14.86□□□□□ -0.03
HMGN1-220ENST00000492280 STOX1Q6ZVD7 989 aa14.86□□□□□ -0.03
HMGN1-220ENST00000492280 HIP1O00291 1037 aa14.86□□□□□ -0.03
HMGN1-220ENST00000492280 KCNB2Q92953 911 aa14.86□□□□□ -0.03
HMGN1-220ENST00000492280 PPP1R9BQ96SB3 815 aa14.86□□□□□ -0.03
HMGN1-220ENST00000492280 LARP1BQ659C4 914 aaKnown RBP14.85□□□□□ -0.03
HMGN1-220ENST00000492280 TM6SF1Q9BZW5 370 aa14.85□□□□□ -0.03
HMGN1-220ENST00000492280 NAP1L2Q9ULW6 460 aaPredicted RBP14.85□□□□□ -0.03
HMGN1-220ENST00000492280 SHANK3Q9BYB0 1731 aa14.85□□□□□ -0.03
HMGN1-220ENST00000492280 PARP4Q9UKK3 1724 aaKnown RBP14.85□□□□□ -0.03
HMGN1-220ENST00000492280 TOGARAM1Q9Y4F4 1720 aa14.85□□□□□ -0.03
HMGN1-220ENST00000492280 SOS2Q07890 1332 aaPredicted RBP14.85□□□□□ -0.03
HMGN1-220ENST00000492280 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.85□□□□□ -0.03
HMGN1-220ENST00000492280 HSP90B1P14625 803 aaKnown RBP14.85□□□□□ -0.03
HMGN1-220ENST00000492280 GIMAP6Q6P9H5 292 aa14.85□□□□□ -0.03
HMGN1-220ENST00000492280 BTG4Q9NY30 223 aa14.85□□□□□ -0.03
HMGN1-220ENST00000492280 TMOD3Q9NYL9 352 aa14.85□□□□□ -0.03
HMGN1-220ENST00000492280 NUP188Q5SRE5 1749 aa14.84□□□□□ -0.03
HMGN1-220ENST00000492280 A0A1B0GUL7 405 aa14.84□□□□□ -0.03
HMGN1-220ENST00000492280 FKBP4Q02790 459 aaKnown RBP eCLIP14.84□□□□□ -0.03
HMGN1-220ENST00000492280 HAUS7Q99871 368 aa14.84□□□□□ -0.03
HMGN1-220ENST00000492280 TFIP11Q9UBB9 837 aaKnown RBP14.84□□□□□ -0.03
HMGN1-220ENST00000492280 TAOK2Q9UL54 1235 aa14.84□□□□□ -0.03
HMGN1-220ENST00000492280 HCLS1P14317 486 aaPredicted RBP14.84□□□□□ -0.03
HMGN1-220ENST00000492280 RNF20Q5VTR2 975 aa14.84□□□□□ -0.03
HMGN1-220ENST00000492280 TTLL5Q6EMB2 1281 aa14.84□□□□□ -0.03
HMGN1-220ENST00000492280 Q6ZUG5 572 aa14.84□□□□□ -0.03
HMGN1-220ENST00000492280 PIGBQ92521 554 aa14.84□□□□□ -0.03
HMGN1-220ENST00000492280 TSPY26PQ9H489 355 aa14.84□□□□□ -0.03
HMGN1-220ENST00000492280 PAG1Q9NWQ8 432 aa14.84□□□□□ -0.03
HMGN1-220ENST00000492280 HLFQ16534 295 aa14.83□□□□□ -0.04
HMGN1-220ENST00000492280 BRF1Q92994 677 aa14.83□□□□□ -0.04
HMGN1-220ENST00000492280 UBR2Q8IWV8 1755 aa14.83□□□□□ -0.04
HMGN1-220ENST00000492280 ERVV-2B6SEH9 535 aa14.83□□□□□ -0.04
HMGN1-220ENST00000492280 SCARF1Q14162 830 aa14.83□□□□□ -0.04
HMGN1-220ENST00000492280 CARD10Q9BWT7 1032 aa14.83□□□□□ -0.04
HMGN1-220ENST00000492280 SH2B1Q9NRF2 756 aaPredicted RBP14.83□□□□□ -0.04
HMGN1-220ENST00000492280 PSMA5P28066 241 aa14.82□□□□□ -0.04
HMGN1-220ENST00000492280 PLCB2Q00722 1185 aa14.82□□□□□ -0.04
HMGN1-220ENST00000492280 RAB11FIP4Q86YS3 637 aa14.82□□□□□ -0.04
HMGN1-220ENST00000492280 FAM177BA6PVY3 158 aa14.82□□□□□ -0.04
HMGN1-220ENST00000492280 EYA2O00167 538 aa14.82□□□□□ -0.04
HMGN1-220ENST00000492280 HAND2P61296 217 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms