RNA–Protein interactions for RNA: ENST00000491299.5

CMSS1-206, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 881 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-206ENST00000491299 MMP10P09238 476 aa11.3□□□□□ -0.6
CMSS1-206ENST00000491299 WDR43Q15061 677 aaKnown RBP eCLIP11.3□□□□□ -0.6
CMSS1-206ENST00000491299 MCM10Q7L590 875 aa11.3□□□□□ -0.6
CMSS1-206ENST00000491299 PARP3Q9Y6F1 533 aa11.3□□□□□ -0.6
CMSS1-206ENST00000491299 COL15A1P39059 1388 aa11.29□□□□□ -0.6
CMSS1-206ENST00000491299 HEG1Q9ULI3 1381 aa11.29□□□□□ -0.6
CMSS1-206ENST00000491299 CYP19A1P11511 503 aaPredicted RBP11.29□□□□□ -0.6
CMSS1-206ENST00000491299 NLGN2Q8NFZ4 835 aa11.29□□□□□ -0.6
CMSS1-206ENST00000491299 PXYLP1Q8TE99 480 aa11.29□□□□□ -0.6
CMSS1-206ENST00000491299 ZNF496Q96IT1 587 aaPredicted RBP11.29□□□□□ -0.6
CMSS1-206ENST00000491299 TMEM134Q9H6X4 195 aa11.29□□□□□ -0.6
CMSS1-206ENST00000491299 USP42Q9H9J4 1324 aaKnown RBP11.29□□□□□ -0.6
CMSS1-206ENST00000491299 OATP04181 439 aa11.28□□□□□ -0.6
CMSS1-206ENST00000491299 GYS1P13807 737 aa11.28□□□□□ -0.6
CMSS1-206ENST00000491299 NFE2L2Q16236 605 aa11.28□□□□□ -0.6
CMSS1-206ENST00000491299 INTS5Q6P9B9 1019 aaKnown RBP11.28□□□□□ -0.6
CMSS1-206ENST00000491299 METTL3Q86U44 580 aaKnown RBP11.28□□□□□ -0.6
CMSS1-206ENST00000491299 PRKRIP1Q9H875 184 aaPredicted RBP11.28□□□□□ -0.6
CMSS1-206ENST00000491299 ZBTB1Q9Y2K1 713 aa11.28□□□□□ -0.6
CMSS1-206ENST00000491299 ZNF330Q9Y3S2 320 aaPredicted RBP11.28□□□□□ -0.6
CMSS1-206ENST00000491299 SOS1Q07889 1333 aaPredicted RBP11.28□□□□□ -0.6
CMSS1-206ENST00000491299 UTRNP46939 3433 aa11.28□□□□□ -0.6
CMSS1-206ENST00000491299 A0A087WZG4 1122 aa11.27□□□□□ -0.61
CMSS1-206ENST00000491299 GRIN3BO60391 1043 aa11.27□□□□□ -0.61
CMSS1-206ENST00000491299 CANXP27824 592 aaKnown RBP11.27□□□□□ -0.61
CMSS1-206ENST00000491299 LMOD3Q0VAK6 560 aa11.27□□□□□ -0.61
CMSS1-206ENST00000491299 DCTN1Q14203 1278 aa11.27□□□□□ -0.61
CMSS1-206ENST00000491299 TAF7Q15545 349 aaPredicted RBP11.27□□□□□ -0.61
CMSS1-206ENST00000491299 PNISRQ8TF01 805 aaKnown RBP11.27□□□□□ -0.61
CMSS1-206ENST00000491299 PLEKHF1Q96S99 279 aa11.27□□□□□ -0.61
CMSS1-206ENST00000491299 KIF13BQ9NQT8 1826 aa11.26□□□□□ -0.61
CMSS1-206ENST00000491299 USPL1Q5W0Q7 1092 aa11.26□□□□□ -0.61
CMSS1-206ENST00000491299 SRP68Q9UHB9 627 aaKnown RBP11.26□□□□□ -0.61
CMSS1-206ENST00000491299 NARFQ9UHQ1 456 aa11.26□□□□□ -0.61
CMSS1-206ENST00000491299 GOLGB1Q14789 3259 aaKnown RBP11.26□□□□□ -0.61
CMSS1-206ENST00000491299 ITGBL1O95965 494 aaPredicted RBP11.25□□□□□ -0.61
CMSS1-206ENST00000491299 SNRPA1P09661 255 aaKnown RBP11.25□□□□□ -0.61
CMSS1-206ENST00000491299 APLP1P51693 650 aa11.25□□□□□ -0.61
CMSS1-206ENST00000491299 NECTIN2Q92692 538 aa11.25□□□□□ -0.61
CMSS1-206ENST00000491299 LAMB4A4D0S4 1761 aa11.25□□□□□ -0.61
CMSS1-206ENST00000491299 KDM3BQ7LBC6 1761 aa11.24□□□□□ -0.61
CMSS1-206ENST00000491299 IL6STP40189 918 aaPredicted RBP11.24□□□□□ -0.61
CMSS1-206ENST00000491299 RIPK4P57078 832 aa11.24□□□□□ -0.61
CMSS1-206ENST00000491299 TGFB2P61812 414 aa11.24□□□□□ -0.61
CMSS1-206ENST00000491299 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.24□□□□□ -0.61
CMSS1-206ENST00000491299 C10orf71Q711Q0 1435 aa11.24□□□□□ -0.61
CMSS1-206ENST00000491299 SCN7AQ01118 1682 aa11.24□□□□□ -0.61
CMSS1-206ENST00000491299 N4BP2Q86UW6 1770 aaPredicted RBP11.23□□□□□ -0.61
CMSS1-206ENST00000491299 KCNQ3O43525 872 aa11.23□□□□□ -0.61
CMSS1-206ENST00000491299 EIF5P55010 431 aaKnown RBP11.23□□□□□ -0.61
CMSS1-206ENST00000491299 NLRP7Q8WX94 980 aa11.23□□□□□ -0.61
CMSS1-206ENST00000491299 NPHP1O15259 732 aa11.22□□□□□ -0.61
CMSS1-206ENST00000491299 YBX3P16989 372 aaKnown RBP eCLIP11.22□□□□□ -0.61
CMSS1-206ENST00000491299 KCNC4Q03721 635 aa11.22□□□□□ -0.61
CMSS1-206ENST00000491299 CCDC184Q52MB2 194 aa11.22□□□□□ -0.61
CMSS1-206ENST00000491299 IFFO2Q5TF58 517 aa11.22□□□□□ -0.61
CMSS1-206ENST00000491299 CCDC146Q8IYE0 955 aa11.22□□□□□ -0.61
CMSS1-206ENST00000491299 RUNDC1Q96C34 613 aa11.22□□□□□ -0.61
CMSS1-206ENST00000491299 WWC3Q9ULE0 1092 aa11.22□□□□□ -0.61
CMSS1-206ENST00000491299 AFDNP55196 1824 aaKnown RBP11.21□□□□□ -0.61
CMSS1-206ENST00000491299 BCORQ6W2J9 1755 aa11.21□□□□□ -0.61
CMSS1-206ENST00000491299 PXDNLA1KZ92 1463 aa11.21□□□□□ -0.61
CMSS1-206ENST00000491299 A1BGP04217 495 aa11.21□□□□□ -0.61
CMSS1-206ENST00000491299 TMPOP42166 694 aaKnown RBP11.21□□□□□ -0.61
CMSS1-206ENST00000491299 NEUROD2Q15784 382 aa11.21□□□□□ -0.61
CMSS1-206ENST00000491299 THUMPD2Q9BTF0 503 aaKnown RBP11.21□□□□□ -0.61
CMSS1-206ENST00000491299 MIS18AQ9NYP9 233 aa11.21□□□□□ -0.61
CMSS1-206ENST00000491299 TSPYL4Q9UJ04 414 aa11.21□□□□□ -0.61
CMSS1-206ENST00000491299 USP16Q9Y5T5 823 aa11.21□□□□□ -0.61
CMSS1-206ENST00000491299 POLRMTO00411 1230 aaKnown RBP11.2□□□□□ -0.62
CMSS1-206ENST00000491299 DDR1Q08345 913 aa11.2□□□□□ -0.62
CMSS1-206ENST00000491299 MAP2K5Q13163 448 aa11.2□□□□□ -0.62
CMSS1-206ENST00000491299 NFIXQ14938 502 aa11.2□□□□□ -0.62
CMSS1-206ENST00000491299 BICDL1Q6ZP65 573 aa11.2□□□□□ -0.62
CMSS1-206ENST00000491299 DZIP3Q86Y13 1208 aaKnown RBP11.2□□□□□ -0.62
CMSS1-206ENST00000491299 MTRQ99707 1265 aa11.2□□□□□ -0.62
CMSS1-206ENST00000491299 TBC1D2BQ9UPU7 963 aa11.2□□□□□ -0.62
CMSS1-206ENST00000491299 ZNF652Q9Y2D9 606 aa11.2□□□□□ -0.62
CMSS1-206ENST00000491299 KIAA1551Q9HCM1 1747 aa11.2□□□□□ -0.62
CMSS1-206ENST00000491299 BRCA1P38398 1863 aaKnown RBP11.19□□□□□ -0.62
CMSS1-206ENST00000491299 CARMIL3Q8ND23 1372 aa11.19□□□□□ -0.62
CMSS1-206ENST00000491299 A0A0G2JLW4 131 aa11.19□□□□□ -0.62
CMSS1-206ENST00000491299 PRAMEF22A3QJZ6 481 aa11.19□□□□□ -0.62
CMSS1-206ENST00000491299 SERPINB2P05120 415 aa11.19□□□□□ -0.62
CMSS1-206ENST00000491299 TM4SF1P30408 202 aa11.19□□□□□ -0.62
CMSS1-206ENST00000491299 BABAM1Q9NWV8 329 aa11.19□□□□□ -0.62
CMSS1-206ENST00000491299 ADAMTS8Q9UP79 889 aa11.19□□□□□ -0.62
CMSS1-206ENST00000491299 BCS1LQ9Y276 419 aa11.19□□□□□ -0.62
CMSS1-206ENST00000491299 RRP7AQ9Y3A4 280 aaKnown RBP11.19□□□□□ -0.62
CMSS1-206ENST00000491299 NRXN2Q9P2S2 1712 aa11.18□□□□□ -0.62
CMSS1-206ENST00000491299 CFHP08603 1231 aa11.18□□□□□ -0.62
CMSS1-206ENST00000491299 DPEP1P16444 411 aa11.18□□□□□ -0.62
CMSS1-206ENST00000491299 EIF4A1P60842 406 aaKnown RBP11.18□□□□□ -0.62
CMSS1-206ENST00000491299 SETDB2Q96T68 719 aa11.18□□□□□ -0.62
CMSS1-206ENST00000491299 PHOX2BQ99453 314 aa11.18□□□□□ -0.62
CMSS1-206ENST00000491299 PIM2Q9P1W9 311 aa11.18□□□□□ -0.62
CMSS1-206ENST00000491299 ARFGEF1Q9Y6D6 1849 aa11.18□□□□□ -0.62
CMSS1-206ENST00000491299 CCER2I3L3R5 266 aa11.17□□□□□ -0.62
CMSS1-206ENST00000491299 GIGYF1O75420 1035 aaPredicted RBP11.17□□□□□ -0.62
CMSS1-206ENST00000491299 PIP4K2AP48426 406 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms