RNA–Protein interactions for RNA: ENST00000491299.5

CMSS1-206, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 881 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-206ENST00000491299 AEBP2Q6ZN18 517 aaPredicted RBP27.81■■■□□ 2.04
CMSS1-206ENST00000491299 CHIC1Q5VXU3 224 aa26.83■■□□□ 1.89
CMSS1-206ENST00000491299 SENP3Q9H4L4 574 aaPredicted RBP23.65■■□□□ 1.38
CMSS1-206ENST00000491299 PHF23Q9BUL5 403 aaPredicted RBP23.56■■□□□ 1.36
CMSS1-206ENST00000491299 FOXD1Q16676 465 aa21.99■■□□□ 1.11
CMSS1-206ENST00000491299 PLPPR3Q6T4P5 718 aa21.66■■□□□ 1.06
CMSS1-206ENST00000491299 PPP6R1Q9UPN7 881 aa20.9■□□□□ 0.94
CMSS1-206ENST00000491299 ADRA2BP18089 450 aa20.89■□□□□ 0.93
CMSS1-206ENST00000491299 NISCHQ9Y2I1 1504 aa20.86■□□□□ 0.93
CMSS1-206ENST00000491299 PIAS4Q8N2W9 510 aaPredicted RBP20.71■□□□□ 0.91
CMSS1-206ENST00000491299 MSH5O43196 834 aa20.4■□□□□ 0.86
CMSS1-206ENST00000491299 POTEDQ86YR6 584 aa19.15■□□□□ 0.66
CMSS1-206ENST00000491299 SCAF1Q9H7N4 1312 aaKnown RBP19.09■□□□□ 0.65
CMSS1-206ENST00000491299 PPP4R3CPQ6ZMV5 832 aa19.06■□□□□ 0.64
CMSS1-206ENST00000491299 MAPK8IP2Q13387 824 aaPredicted RBP19.05■□□□□ 0.64
CMSS1-206ENST00000491299 DMRT2Q9Y5R5 561 aa18.81■□□□□ 0.6
CMSS1-206ENST00000491299 CCDC180Q9P1Z9 1646 aa18.67■□□□□ 0.58
CMSS1-206ENST00000491299 CNKSR2Q8WXI2 1034 aa18.58■□□□□ 0.56
CMSS1-206ENST00000491299 NCBP3Q53F19 620 aaKnown RBP18.46■□□□□ 0.55
CMSS1-206ENST00000491299 ABCC9O60706 1549 aa18.36■□□□□ 0.53
CMSS1-206ENST00000491299 RNF216Q9NWF9 866 aaPredicted RBP18.29■□□□□ 0.52
CMSS1-206ENST00000491299 HOXD11P31277 338 aaPredicted RBP18.28■□□□□ 0.52
CMSS1-206ENST00000491299 KCNA4P22459 653 aa18.27■□□□□ 0.52
CMSS1-206ENST00000491299 NPM3O75607 178 aaKnown RBP18.2■□□□□ 0.5
CMSS1-206ENST00000491299 DCAF8L1A6NGE4 600 aa18.13■□□□□ 0.49
CMSS1-206ENST00000491299 RB1CC1Q8TDY2 1594 aa17.65■□□□□ 0.42
CMSS1-206ENST00000491299 DNAJC5BQ9UF47 199 aa17.59■□□□□ 0.41
CMSS1-206ENST00000491299 NACADO15069 1562 aa17.57■□□□□ 0.4
CMSS1-206ENST00000491299 DCAF8L2P0C7V8 631 aa17.54■□□□□ 0.4
CMSS1-206ENST00000491299 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.49■□□□□ 0.392e-10■■■■□ 23
CMSS1-206ENST00000491299 RNF39Q9H2S5 420 aa17.44■□□□□ 0.38
CMSS1-206ENST00000491299 MYO15BQ96JP2 1530 aa17.39■□□□□ 0.37
CMSS1-206ENST00000491299 ZCCHC6Q5VYS8 1495 aaKnown RBP17.36■□□□□ 0.37
CMSS1-206ENST00000491299 SLC4A1APQ9BWU0 796 aaKnown RBP17.35■□□□□ 0.37
CMSS1-206ENST00000491299 CACNB1Q02641 598 aaPredicted RBP17.27■□□□□ 0.36
CMSS1-206ENST00000491299 DCAF1Q9Y4B6 1507 aa17.26■□□□□ 0.35
CMSS1-206ENST00000491299 SLC4A2P04920 1241 aa17.24■□□□□ 0.35
CMSS1-206ENST00000491299 UNC13AQ9UPW8 1703 aa17.24■□□□□ 0.35
CMSS1-206ENST00000491299 C1QBPQ07021 282 aaKnown RBP17.2■□□□□ 0.34
CMSS1-206ENST00000491299 U3KPZ7 1027 aaPredicted RBP17.15■□□□□ 0.34
CMSS1-206ENST00000491299 PABPN1Q86U42 306 aaKnown RBP eCLIP17.1■□□□□ 0.33
CMSS1-206ENST00000491299 BICRAQ9NZM4 1560 aa17.02■□□□□ 0.32
CMSS1-206ENST00000491299 SCRIBQ14160 1630 aa17.01■□□□□ 0.31
CMSS1-206ENST00000491299 SHROOM4Q9ULL8 1493 aa16.92■□□□□ 0.3
CMSS1-206ENST00000491299 FOXD4L1Q9NU39 408 aa16.9■□□□□ 0.3
CMSS1-206ENST00000491299 MYCNP04198 464 aaPredicted RBP16.83■□□□□ 0.28
CMSS1-206ENST00000491299 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.8■□□□□ 0.28
CMSS1-206ENST00000491299 ZBTB22O15209 634 aa16.8■□□□□ 0.28
CMSS1-206ENST00000491299 HNRNPUL2Q1KMD3 747 aaKnown RBP16.8■□□□□ 0.28
CMSS1-206ENST00000491299 SPINK5Q9NQ38 1064 aaPredicted RBP16.78■□□□□ 0.28
CMSS1-206ENST00000491299 CAPN15O75808 1086 aa16.76■□□□□ 0.27
CMSS1-206ENST00000491299 SAMD1Q6SPF0 538 aaPredicted RBP16.73■□□□□ 0.27
CMSS1-206ENST00000491299 APLP2Q06481 763 aa16.71■□□□□ 0.27
CMSS1-206ENST00000491299 EIF4G1Q04637 1599 aaKnown RBP16.64■□□□□ 0.25
CMSS1-206ENST00000491299 CC2D2AQ9P2K1 1620 aa16.61■□□□□ 0.25
CMSS1-206ENST00000491299 TRHP20396 242 aaPredicted RBP16.6■□□□□ 0.25
CMSS1-206ENST00000491299 EHMT2Q96KQ7 1210 aa16.55■□□□□ 0.24
CMSS1-206ENST00000491299 ZNF219Q9P2Y4 722 aaPredicted RBP16.55■□□□□ 0.24
CMSS1-206ENST00000491299 CECR2Q9BXF3 1484 aa16.52■□□□□ 0.23
CMSS1-206ENST00000491299 DSG3P32926 999 aa16.49■□□□□ 0.23
CMSS1-206ENST00000491299 ABCB7O75027 752 aa16.43■□□□□ 0.22
CMSS1-206ENST00000491299 CSRNP3Q8WYN3 585 aa16.42■□□□□ 0.22
CMSS1-206ENST00000491299 ATF5Q9Y2D1 282 aaPredicted RBP16.41■□□□□ 0.22
CMSS1-206ENST00000491299 ATXN8OSP0DMR3 200 aa16.28■□□□□ 0.2
CMSS1-206ENST00000491299 SMARCA4P51532 1647 aa16.25■□□□□ 0.19
CMSS1-206ENST00000491299 BAZ1AQ9NRL2 1556 aaPredicted RBP16.23■□□□□ 0.19
CMSS1-206ENST00000491299 POLA2Q14181 598 aa16.22■□□□□ 0.19
CMSS1-206ENST00000491299 SMARCA2P51531 1590 aa16.19■□□□□ 0.18
CMSS1-206ENST00000491299 NCAPD3P42695 1498 aa16.16■□□□□ 0.18
CMSS1-206ENST00000491299 ATAD2BQ9ULI0 1458 aa16.16■□□□□ 0.18
CMSS1-206ENST00000491299 HMGXB3Q12766 1538 aa16.12■□□□□ 0.17
CMSS1-206ENST00000491299 BAZ1BQ9UIG0 1483 aaKnown RBP16.07■□□□□ 0.16
CMSS1-206ENST00000491299 PEG3Q9GZU2 1588 aa16.07■□□□□ 0.16
CMSS1-206ENST00000491299 MROH2BQ7Z745 1585 aa16.05■□□□□ 0.16
CMSS1-206ENST00000491299 ZBTB12Q9Y330 459 aaPredicted RBP15.92■□□□□ 0.14
CMSS1-206ENST00000491299 WIZO95785 1651 aa15.92■□□□□ 0.14
CMSS1-206ENST00000491299 ERCC6Q03468 1493 aa15.9■□□□□ 0.14
CMSS1-206ENST00000491299 LAMC3Q9Y6N6 1575 aa15.83■□□□□ 0.12
CMSS1-206ENST00000491299 RSF1Q96T23 1441 aaPredicted RBP15.82■□□□□ 0.12
CMSS1-206ENST00000491299 NESP48681 1621 aa15.82■□□□□ 0.12
CMSS1-206ENST00000491299 FBLN2P98095 1184 aa15.76■□□□□ 0.11
CMSS1-206ENST00000491299 DNAJC5Q9H3Z4 198 aa15.75■□□□□ 0.11
CMSS1-206ENST00000491299 TOP2AP11388 1531 aaKnown RBP15.74■□□□□ 0.11
CMSS1-206ENST00000491299 CUX2O14529 1486 aa15.74■□□□□ 0.11
CMSS1-206ENST00000491299 RBM42Q9BTD8 480 aaKnown RBP15.74■□□□□ 0.11
CMSS1-206ENST00000491299 OSCARQ8IYS5 282 aa15.73■□□□□ 0.11
CMSS1-206ENST00000491299 PDS5BQ9NTI5 1447 aa15.72■□□□□ 0.11
CMSS1-206ENST00000491299 CADPSQ9ULU8 1353 aa15.7■□□□□ 0.1
CMSS1-206ENST00000491299 KIF21AQ7Z4S6 1674 aa15.69■□□□□ 0.1
CMSS1-206ENST00000491299 MKRN4PQ13434 485 aaPredicted RBP15.66■□□□□ 0.1
CMSS1-206ENST00000491299 THOC2Q8NI27 1593 aaKnown RBP15.64■□□□□ 0.09
CMSS1-206ENST00000491299 CFTRP13569 1480 aa15.58■□□□□ 0.08
CMSS1-206ENST00000491299 CEP164Q9UPV0 1460 aa15.56■□□□□ 0.08
CMSS1-206ENST00000491299 PRDM2Q13029 1718 aa15.55■□□□□ 0.08
CMSS1-206ENST00000491299 MRC2Q9UBG0 1479 aa15.55■□□□□ 0.08
CMSS1-206ENST00000491299 FANCD2Q9BXW9 1451 aa15.54■□□□□ 0.08
CMSS1-206ENST00000491299 CCDC88BA6NC98 1476 aa15.52■□□□□ 0.08
CMSS1-206ENST00000491299 WDR62O43379 1518 aa15.49■□□□□ 0.07
CMSS1-206ENST00000491299 AKT1S1Q96B36 256 aa15.46■□□□□ 0.07
CMSS1-206ENST00000491299 SPDYE2BA6NHP3 402 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms