RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 KCNQ2O43526 872 aa7.89□□□□□ -1.15
SF3A3-208ENST00000489537 BCAMP50895 628 aa7.89□□□□□ -1.15
SF3A3-208ENST00000489537 NEXNQ0ZGT2 675 aa7.89□□□□□ -1.15
SF3A3-208ENST00000489537 TSR1Q2NL82 804 aaKnown RBP7.89□□□□□ -1.15
SF3A3-208ENST00000489537 BMP2KLQ5H9B9 411 aa7.89□□□□□ -1.15
SF3A3-208ENST00000489537 ZCRB1Q8TBF4 217 aaKnown RBP7.89□□□□□ -1.15
SF3A3-208ENST00000489537 FMNL2Q96PY5 1086 aa7.89□□□□□ -1.15
SF3A3-208ENST00000489537 SRCIN1Q9C0H9 1055 aa7.89□□□□□ -1.15
SF3A3-208ENST00000489537 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.89□□□□□ -1.15
SF3A3-208ENST00000489537 ATP10DQ9P241 1426 aa7.88□□□□□ -1.15
SF3A3-208ENST00000489537 UTRNP46939 3433 aa7.88□□□□□ -1.15
SF3A3-208ENST00000489537 RAB11FIP3O75154 756 aa7.88□□□□□ -1.15
SF3A3-208ENST00000489537 GIGYF1O75420 1035 aaPredicted RBP7.88□□□□□ -1.15
SF3A3-208ENST00000489537 SNRPA1P09661 255 aaKnown RBP7.88□□□□□ -1.15
SF3A3-208ENST00000489537 CABP4P57796 275 aa7.88□□□□□ -1.15
SF3A3-208ENST00000489537 BECN1Q14457 450 aa7.88□□□□□ -1.15
SF3A3-208ENST00000489537 ZNF790Q6PG37 636 aa7.88□□□□□ -1.15
SF3A3-208ENST00000489537 MPRIPQ6WCQ1 1025 aa7.88□□□□□ -1.15
SF3A3-208ENST00000489537 DDX21Q9NR30 783 aaKnown RBP eCLIP7.88□□□□□ -1.15
SF3A3-208ENST00000489537 THRAP3Q9Y2W1 955 aaKnown RBP7.88□□□□□ -1.15
SF3A3-208ENST00000489537 NBPF26B4DH59 902 aa7.87□□□□□ -1.15
SF3A3-208ENST00000489537 RGS20O76081 388 aa7.87□□□□□ -1.15
SF3A3-208ENST00000489537 UBTFL1P0CB47 393 aaPredicted RBP7.87□□□□□ -1.15
SF3A3-208ENST00000489537 HMGB2P26583 209 aaKnown RBP7.87□□□□□ -1.15
SF3A3-208ENST00000489537 ANKRD45Q5TZF3 282 aa7.87□□□□□ -1.15
SF3A3-208ENST00000489537 SLC4A10Q6U841 1118 aa7.87□□□□□ -1.15
SF3A3-208ENST00000489537 DNAAF4Q8WXU2 420 aa7.87□□□□□ -1.15
SF3A3-208ENST00000489537 LGR6Q9HBX8 967 aa7.87□□□□□ -1.15
SF3A3-208ENST00000489537 MIS18AQ9NYP9 233 aa7.87□□□□□ -1.15
SF3A3-208ENST00000489537 MRC1P22897 1456 aa7.87□□□□□ -1.15
SF3A3-208ENST00000489537 ADAMTS7Q9UKP4 1686 aa7.86□□□□□ -1.15
SF3A3-208ENST00000489537 PRSS12P56730 875 aa7.86□□□□□ -1.15
SF3A3-208ENST00000489537 DDB1Q16531 1140 aa7.86□□□□□ -1.15
SF3A3-208ENST00000489537 C8orf34Q49A92 452 aa7.86□□□□□ -1.15
SF3A3-208ENST00000489537 CEP85Q6P2H3 762 aa7.86□□□□□ -1.15
SF3A3-208ENST00000489537 KSR2Q6VAB6 950 aa7.86□□□□□ -1.15
SF3A3-208ENST00000489537 TSR3Q9UJK0 312 aaKnown RBP7.86□□□□□ -1.15
SF3A3-208ENST00000489537 TSKSQ9UJT2 592 aa7.86□□□□□ -1.15
SF3A3-208ENST00000489537 RGPD2P0DJD1 1756 aa7.85□□□□□ -1.15
SF3A3-208ENST00000489537 EIF2S2P20042 333 aaKnown RBP7.85□□□□□ -1.15
SF3A3-208ENST00000489537 ATP8B2P98198 1209 aa7.85□□□□□ -1.15
SF3A3-208ENST00000489537 ERC1Q8IUD2 1116 aa7.85□□□□□ -1.15
SF3A3-208ENST00000489537 VSIG10Q8N0Z9 540 aa7.85□□□□□ -1.15
SF3A3-208ENST00000489537 LINS1Q8NG48 757 aa7.85□□□□□ -1.15
SF3A3-208ENST00000489537 ACSBG1Q96GR2 724 aa7.85□□□□□ -1.15
SF3A3-208ENST00000489537 HPS5Q9UPZ3 1129 aa7.85□□□□□ -1.15
SF3A3-208ENST00000489537 TNNQ9UQP3 1299 aa7.85□□□□□ -1.15
SF3A3-208ENST00000489537 KDM3BQ7LBC6 1761 aa7.84□□□□□ -1.15
SF3A3-208ENST00000489537 AOX1Q06278 1338 aa7.84□□□□□ -1.15
SF3A3-208ENST00000489537 EPB41L2O43491 1005 aaKnown RBP7.84□□□□□ -1.15
SF3A3-208ENST00000489537 NFATC2IPQ8NCF5 419 aa7.84□□□□□ -1.15
SF3A3-208ENST00000489537 WBP1LQ9NX94 342 aa7.84□□□□□ -1.15
SF3A3-208ENST00000489537 C9orf78Q9NZ63 289 aaPredicted RBP7.84□□□□□ -1.15
SF3A3-208ENST00000489537 NOP58Q9Y2X3 529 aaKnown RBP7.84□□□□□ -1.15
SF3A3-208ENST00000489537 BCL9O00512 1426 aa7.84□□□□□ -1.15
SF3A3-208ENST00000489537 CASZ1Q86V15 1759 aa7.84□□□□□ -1.15
SF3A3-208ENST00000489537 PKD1L3Q7Z443 1732 aa7.83□□□□□ -1.16
SF3A3-208ENST00000489537 CYP27B1O15528 508 aa7.83□□□□□ -1.16
SF3A3-208ENST00000489537 ITGBL1O95965 494 aaPredicted RBP7.83□□□□□ -1.16
SF3A3-208ENST00000489537 KCNQ4P56696 695 aa7.83□□□□□ -1.16
SF3A3-208ENST00000489537 PPP4CP60510 307 aa7.83□□□□□ -1.16
SF3A3-208ENST00000489537 MTX1Q13505 466 aa7.83□□□□□ -1.16
SF3A3-208ENST00000489537 KRT24Q2M2I5 525 aa7.83□□□□□ -1.16
SF3A3-208ENST00000489537 BEND3Q5T5X7 828 aa7.83□□□□□ -1.16
SF3A3-208ENST00000489537 NPM2Q86SE8 214 aaKnown RBP7.83□□□□□ -1.16
SF3A3-208ENST00000489537 GPATCH3Q96I76 525 aa7.83□□□□□ -1.16
SF3A3-208ENST00000489537 MEIS3Q99687 375 aa7.83□□□□□ -1.16
SF3A3-208ENST00000489537 LRRCC1Q9C099 1032 aa7.83□□□□□ -1.16
SF3A3-208ENST00000489537 OSBPL3Q9H4L5 887 aa7.83□□□□□ -1.16
SF3A3-208ENST00000489537 CHPF2Q9P2E5 772 aa7.83□□□□□ -1.16
SF3A3-208ENST00000489537 RBM27Q9P2N5 1060 aaKnown RBP7.83□□□□□ -1.16
SF3A3-208ENST00000489537 PNMA3Q9UL41 463 aa7.83□□□□□ -1.16
SF3A3-208ENST00000489537 TNS2Q63HR2 1409 aa7.83□□□□□ -1.16
SF3A3-208ENST00000489537 MEGF6O75095 1541 aa7.83□□□□□ -1.16
SF3A3-208ENST00000489537 PI4KAP2A4QPH2 592 aa7.82□□□□□ -1.16
SF3A3-208ENST00000489537 EXOC5O00471 708 aa7.82□□□□□ -1.16
SF3A3-208ENST00000489537 PLSCR1O15162 318 aa7.82□□□□□ -1.16
SF3A3-208ENST00000489537 KDM6AO15550 1401 aaPredicted RBP7.82□□□□□ -1.16
SF3A3-208ENST00000489537 CDC45O75419 566 aa7.82□□□□□ -1.16
SF3A3-208ENST00000489537 OSBPP22059 807 aa7.82□□□□□ -1.16
SF3A3-208ENST00000489537 KCNC4Q03721 635 aa7.82□□□□□ -1.16
SF3A3-208ENST00000489537 TXNRD1Q16881 649 aa7.82□□□□□ -1.16
SF3A3-208ENST00000489537 RIC3Q7Z5B4 369 aa7.82□□□□□ -1.16
SF3A3-208ENST00000489537 TICAM2Q86XR7 235 aa7.82□□□□□ -1.16
SF3A3-208ENST00000489537 PI4KAP1Q8N8J0 262 aa7.82□□□□□ -1.16
SF3A3-208ENST00000489537 SSH3Q8TE77 659 aa7.82□□□□□ -1.16
SF3A3-208ENST00000489537 ARHGEF1Q92888 912 aaKnown RBP7.82□□□□□ -1.16
SF3A3-208ENST00000489537 KIF1BPQ96EK5 621 aa7.82□□□□□ -1.16
SF3A3-208ENST00000489537 SHANK3Q9BYB0 1731 aa7.82□□□□□ -1.16
SF3A3-208ENST00000489537 LNPKQ9C0E8 428 aa7.82□□□□□ -1.16
SF3A3-208ENST00000489537 USP44Q9H0E7 712 aa7.82□□□□□ -1.16
SF3A3-208ENST00000489537 LRRC4BQ9NT99 713 aa7.82□□□□□ -1.16
SF3A3-208ENST00000489537 TMOD3Q9NYL9 352 aa7.82□□□□□ -1.16
SF3A3-208ENST00000489537 GOLGB1Q14789 3259 aaKnown RBP7.82□□□□□ -1.16
SF3A3-208ENST00000489537 COL15A1P39059 1388 aa7.82□□□□□ -1.16
SF3A3-208ENST00000489537 UTYO14607 1347 aa7.81□□□□□ -1.16
SF3A3-208ENST00000489537 F6X3S4 739 aa7.81□□□□□ -1.16
SF3A3-208ENST00000489537 REC8O95072 547 aa7.81□□□□□ -1.16
SF3A3-208ENST00000489537 ZBTB7AO95365 584 aa7.81□□□□□ -1.16
SF3A3-208ENST00000489537 STARD3NLO95772 234 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms