RNA–Protein interactions for RNA: ENST00000486335.1

CCDC142-208, Transcript of coiled-coil domain containing 142, humanhuman

TSL 5

Gene CCDC142, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-208ENST00000486335 ZBTB3Q9H5J0 574 aa12.25□□□□□ -0.45
CCDC142-208ENST00000486335 ZBTB12Q9Y330 459 aaPredicted RBP12.25□□□□□ -0.45
CCDC142-208ENST00000486335 RRP7AQ9Y3A4 280 aaKnown RBP12.25□□□□□ -0.45
CCDC142-208ENST00000486335 NUP98P52948 1817 aa12.25□□□□□ -0.45
CCDC142-208ENST00000486335 HTATSF1O43719 755 aaKnown RBP12.24□□□□□ -0.45
CCDC142-208ENST00000486335 CNGB1Q14028 1251 aaPredicted RBP12.24□□□□□ -0.45
CCDC142-208ENST00000486335 RGMBQ6NW40 437 aa12.24□□□□□ -0.45
CCDC142-208ENST00000486335 GIGYF2Q6Y7W6 1299 aaKnown RBP12.24□□□□□ -0.45
CCDC142-208ENST00000486335 SP8Q8IXZ3 490 aa12.24□□□□□ -0.45
CCDC142-208ENST00000486335 KCNQ5Q9NR82 932 aa12.24□□□□□ -0.45
CCDC142-208ENST00000486335 MKI67P46013 3256 aaKnown RBP12.23□□□□□ -0.45
CCDC142-208ENST00000486335 CDHR2Q9BYE9 1310 aa12.23□□□□□ -0.45
CCDC142-208ENST00000486335 TRPA1O75762 1119 aa12.23□□□□□ -0.45
CCDC142-208ENST00000486335 PRPF38BQ5VTL8 546 aaKnown RBP12.23□□□□□ -0.45
CCDC142-208ENST00000486335 MICALL2Q8IY33 904 aa12.23□□□□□ -0.45
CCDC142-208ENST00000486335 SAGE1Q9NXZ1 904 aa12.23□□□□□ -0.45
CCDC142-208ENST00000486335 ASTN2O75129 1339 aaPredicted RBP12.22□□□□□ -0.45
CCDC142-208ENST00000486335 ADM5C9JUS6 153 aa12.22□□□□□ -0.45
CCDC142-208ENST00000486335 MYL6BP14649 208 aa12.22□□□□□ -0.45
CCDC142-208ENST00000486335 NLRP3Q96P20 1036 aa12.22□□□□□ -0.45
CCDC142-208ENST00000486335 POLR2AP24928 1970 aaKnown RBP12.21□□□□□ -0.45
CCDC142-208ENST00000486335 PSMD14O00487 310 aa12.21□□□□□ -0.45
CCDC142-208ENST00000486335 BBOX1O75936 387 aa12.21□□□□□ -0.45
CCDC142-208ENST00000486335 PROSER3Q2NL68 480 aa12.21□□□□□ -0.45
CCDC142-208ENST00000486335 MPNDQ8N594 471 aa12.21□□□□□ -0.45
CCDC142-208ENST00000486335 RTF1Q92541 710 aaKnown RBP12.21□□□□□ -0.45
CCDC142-208ENST00000486335 DPF2Q92785 391 aa12.21□□□□□ -0.45
CCDC142-208ENST00000486335 THUMPD2Q9BTF0 503 aaKnown RBP12.21□□□□□ -0.45
CCDC142-208ENST00000486335 BCL2L13Q9BXK5 485 aa12.21□□□□□ -0.45
CCDC142-208ENST00000486335 GBA2Q9HCG7 927 aaPredicted RBP12.21□□□□□ -0.45
CCDC142-208ENST00000486335 DUOX1Q9NRD9 1551 aa12.21□□□□□ -0.46
CCDC142-208ENST00000486335 RTL9Q8NET4 1388 aa12.2□□□□□ -0.46
CCDC142-208ENST00000486335 SLC10A3P09131 477 aa12.2□□□□□ -0.46
CCDC142-208ENST00000486335 U2AF1L5P0DN76 240 aaPredicted RBP12.2□□□□□ -0.46
CCDC142-208ENST00000486335 HCLS1P14317 486 aaPredicted RBP12.2□□□□□ -0.46
CCDC142-208ENST00000486335 U2AF1Q01081 240 aaKnown RBP eCLIP12.2□□□□□ -0.46
CCDC142-208ENST00000486335 TNIP1Q15025 636 aa12.2□□□□□ -0.46
CCDC142-208ENST00000486335 TBC1D10BQ4KMP7 808 aaPredicted RBP12.2□□□□□ -0.46
CCDC142-208ENST00000486335 DPP8Q6V1X1 898 aaPredicted RBP12.2□□□□□ -0.46
CCDC142-208ENST00000486335 KRT26Q7Z3Y9 468 aa12.2□□□□□ -0.46
CCDC142-208ENST00000486335 MIER1Q8N108 512 aa12.2□□□□□ -0.46
CCDC142-208ENST00000486335 HPS5Q9UPZ3 1129 aa12.2□□□□□ -0.46
CCDC142-208ENST00000486335 COL4A1P02462 1669 aa12.19□□□□□ -0.46
CCDC142-208ENST00000486335 H7C1D1 291 aa12.19□□□□□ -0.46
CCDC142-208ENST00000486335 ANXA1P04083 346 aa12.19□□□□□ -0.46
CCDC142-208ENST00000486335 KIF6Q6ZMV9 814 aa12.19□□□□□ -0.46
CCDC142-208ENST00000486335 CTU1Q7Z7A3 348 aaKnown RBP12.19□□□□□ -0.46
CCDC142-208ENST00000486335 SUPT20HQ8NEM7 779 aa12.19□□□□□ -0.46
CCDC142-208ENST00000486335 CCDC102AQ96A19 550 aa12.19□□□□□ -0.46
CCDC142-208ENST00000486335 UTP14AQ9BVJ6 771 aaKnown RBP12.19□□□□□ -0.46
CCDC142-208ENST00000486335 POLLQ9UGP5 575 aa12.19□□□□□ -0.46
CCDC142-208ENST00000486335 ZNF157P51786 506 aaPredicted RBP12.18□□□□□ -0.46
CCDC142-208ENST00000486335 PARP10Q53GL7 1025 aa12.18□□□□□ -0.46
CCDC142-208ENST00000486335 PPP1R42Q7Z4L9 355 aa12.18□□□□□ -0.46
CCDC142-208ENST00000486335 NLRP10Q86W26 655 aa12.18□□□□□ -0.46
CCDC142-208ENST00000486335 PLEKHF1Q96S99 279 aa12.18□□□□□ -0.46
CCDC142-208ENST00000486335 TAF1P21675 1872 aa12.17□□□□□ -0.46
CCDC142-208ENST00000486335 PPP2R1AP30153 589 aa12.17□□□□□ -0.46
CCDC142-208ENST00000486335 GRAPQ13588 217 aa12.17□□□□□ -0.46
CCDC142-208ENST00000486335 RBM26Q5T8P6 1007 aaKnown RBP12.17□□□□□ -0.46
CCDC142-208ENST00000486335 RASAL3Q86YV0 1011 aa12.17□□□□□ -0.46
CCDC142-208ENST00000486335 GRAPLQ8TC17 118 aaPredicted RBP12.17□□□□□ -0.46
CCDC142-208ENST00000486335 DBNDD1Q9H9R9 158 aa12.17□□□□□ -0.46
CCDC142-208ENST00000486335 MOB2Q70IA6 237 aa12.16□□□□□ -0.46
CCDC142-208ENST00000486335 C2orf69Q8N8R5 385 aa12.16□□□□□ -0.46
CCDC142-208ENST00000486335 ZNF428Q96B54 188 aa12.16□□□□□ -0.46
CCDC142-208ENST00000486335 R3HDMLQ9H3Y0 253 aa12.16□□□□□ -0.46
CCDC142-208ENST00000486335 LAMB4A4D0S4 1761 aa12.15□□□□□ -0.46
CCDC142-208ENST00000486335 KDM3BQ7LBC6 1761 aa12.15□□□□□ -0.46
CCDC142-208ENST00000486335 ANP32CO43423 234 aa12.15□□□□□ -0.46
CCDC142-208ENST00000486335 GPSM2P81274 684 aa12.15□□□□□ -0.46
CCDC142-208ENST00000486335 DOK7Q18PE1 504 aa12.15□□□□□ -0.46
CCDC142-208ENST00000486335 PNISRQ8TF01 805 aaKnown RBP12.15□□□□□ -0.46
CCDC142-208ENST00000486335 ZNF296Q8WUU4 475 aaPredicted RBP12.15□□□□□ -0.46
CCDC142-208ENST00000486335 CELF1Q92879 486 aaKnown RBP12.15□□□□□ -0.46
CCDC142-208ENST00000486335 NUDCQ9Y266 331 aa12.15□□□□□ -0.46
CCDC142-208ENST00000486335 ERBB4Q15303 1308 aa12.14□□□□□ -0.47
CCDC142-208ENST00000486335 HTTP42858 3142 aa12.14□□□□□ -0.47
CCDC142-208ENST00000486335 RIMBP2O15034 1052 aa12.14□□□□□ -0.47
CCDC142-208ENST00000486335 TBC1D8O95759 1140 aa12.14□□□□□ -0.47
CCDC142-208ENST00000486335 VIL1P09327 827 aaKnown RBP12.14□□□□□ -0.47
CCDC142-208ENST00000486335 WASHC4Q2M389 1173 aa12.14□□□□□ -0.47
CCDC142-208ENST00000486335 CDCA5Q96FF9 252 aa12.14□□□□□ -0.47
CCDC142-208ENST00000486335 LAMB2P55268 1798 aa12.13□□□□□ -0.47
CCDC142-208ENST00000486335 BRCA2P51587 3418 aa12.13□□□□□ -0.47
CCDC142-208ENST00000486335 TCIRG1Q13488 830 aa12.13□□□□□ -0.47
CCDC142-208ENST00000486335 DDX46Q7L014 1031 aaKnown RBP12.13□□□□□ -0.47
CCDC142-208ENST00000486335 COPS6Q7L5N1 327 aa12.13□□□□□ -0.47
CCDC142-208ENST00000486335 DCPSQ96C86 337 aaKnown RBP12.13□□□□□ -0.47
CCDC142-208ENST00000486335 CFAP53Q96M91 514 aa12.13□□□□□ -0.47
CCDC142-208ENST00000486335 GMLQ99445 158 aa12.13□□□□□ -0.47
CCDC142-208ENST00000486335 GGA3Q9NZ52 723 aa12.13□□□□□ -0.47
CCDC142-208ENST00000486335 SCAF8Q9UPN6 1271 aaKnown RBP12.13□□□□□ -0.47
CCDC142-208ENST00000486335 SCN9AQ15858 1988 aa12.12□□□□□ -0.47
CCDC142-208ENST00000486335 ECE2O60344 883 aa12.12□□□□□ -0.47
CCDC142-208ENST00000486335 EIF2S2P20042 333 aaKnown RBP12.12□□□□□ -0.47
CCDC142-208ENST00000486335 RPS12P25398 132 aaKnown RBP12.12□□□□□ -0.47
CCDC142-208ENST00000486335 ZNF280AP59817 542 aaPredicted RBP12.12□□□□□ -0.47
CCDC142-208ENST00000486335 SF3B3Q15393 1217 aaKnown RBP12.12□□□□□ -0.47
CCDC142-208ENST00000486335 KIF4BQ2VIQ3 1234 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms