RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 VPS33BQ9H267 617 aa22.93■■□□□ 1.26
MCF2L-226ENST00000486210 TAF1P21675 1872 aa22.92■■□□□ 1.26
MCF2L-226ENST00000486210 ERBB4Q15303 1308 aa22.92■■□□□ 1.26
MCF2L-226ENST00000486210 CCDC85CA6NKD9 419 aa22.92■■□□□ 1.26
MCF2L-226ENST00000486210 MAP2K2P36507 400 aa22.92■■□□□ 1.26
MCF2L-226ENST00000486210 PDIA6Q15084 440 aa22.92■■□□□ 1.26
MCF2L-226ENST00000486210 PARP10Q53GL7 1025 aa22.92■■□□□ 1.26
MCF2L-226ENST00000486210 SLC10A5Q5PT55 438 aa22.92■■□□□ 1.26
MCF2L-226ENST00000486210 ZNRF3Q9ULT6 936 aa22.92■■□□□ 1.26
MCF2L-226ENST00000486210 CASP8AP2Q9UKL3 1982 aa22.91■■□□□ 1.26
MCF2L-226ENST00000486210 CELF2O95319 508 aaKnown RBP22.91■■□□□ 1.26
MCF2L-226ENST00000486210 RGS19P49795 217 aa22.91■■□□□ 1.26
MCF2L-226ENST00000486210 GMPSP49915 693 aaPredicted RBP22.91■■□□□ 1.26
MCF2L-226ENST00000486210 GLIS2Q9BZE0 524 aaPredicted RBP22.91■■□□□ 1.26
MCF2L-226ENST00000486210 PGAP2Q9UHJ9 254 aa22.91■■□□□ 1.26
MCF2L-226ENST00000486210 HIRAP54198 1017 aaPredicted RBP22.9■■□□□ 1.26
MCF2L-226ENST00000486210 TRIM35Q9UPQ4 493 aa22.9■■□□□ 1.26
MCF2L-226ENST00000486210 UTP14AQ9BVJ6 771 aaKnown RBP22.89■■□□□ 1.25
MCF2L-226ENST00000486210 SALL2Q9Y467 1007 aaPredicted RBP22.89■■□□□ 1.25
MCF2L-226ENST00000486210 DUOX1Q9NRD9 1551 aa22.89■■□□□ 1.25
MCF2L-226ENST00000486210 PROSER3Q2NL68 480 aa22.88■■□□□ 1.25
MCF2L-226ENST00000486210 SUPT20HQ8NEM7 779 aa22.88■■□□□ 1.25
MCF2L-226ENST00000486210 HHIPL1Q96JK4 782 aa22.88■■□□□ 1.25
MCF2L-226ENST00000486210 ANXA1P04083 346 aa22.87■■□□□ 1.25
MCF2L-226ENST00000486210 MLLT1Q03111 559 aaPredicted RBP22.87■■□□□ 1.25
MCF2L-226ENST00000486210 KIAA2012Q0VF49 1180 aa22.87■■□□□ 1.25
MCF2L-226ENST00000486210 CIAPIN1Q6FI81 312 aa22.87■■□□□ 1.25
MCF2L-226ENST00000486210 SP8Q8IXZ3 490 aa22.87■■□□□ 1.25
MCF2L-226ENST00000486210 TRPM4Q8TD43 1214 aa22.87■■□□□ 1.25
MCF2L-226ENST00000486210 TMX4Q9H1E5 349 aaPredicted RBP22.87■■□□□ 1.25
MCF2L-226ENST00000486210 CDHR2Q9BYE9 1310 aa22.86■■□□□ 1.25
MCF2L-226ENST00000486210 LRRC37AA6NMS7 1700 aa22.86■■□□□ 1.25
MCF2L-226ENST00000486210 SHTN1A0MZ66 631 aa22.86■■□□□ 1.25
MCF2L-226ENST00000486210 DPP8Q6V1X1 898 aaPredicted RBP22.86■■□□□ 1.25
MCF2L-226ENST00000486210 YDJCA8MPS7 323 aa22.85■■□□□ 1.25
MCF2L-226ENST00000486210 BBOX1O75936 387 aa22.85■■□□□ 1.25
MCF2L-226ENST00000486210 RAD17O75943 681 aa22.85■■□□□ 1.25
MCF2L-226ENST00000486210 EIF2S2P20042 333 aaKnown RBP22.85■■□□□ 1.25
MCF2L-226ENST00000486210 BRPF1P55201 1214 aaPredicted RBP22.85■■□□□ 1.25
MCF2L-226ENST00000486210 LMOD3Q0VAK6 560 aa22.85■■□□□ 1.25
MCF2L-226ENST00000486210 MPNDQ8N594 471 aa22.85■■□□□ 1.25
MCF2L-226ENST00000486210 MCOLN1Q9GZU1 580 aa22.85■■□□□ 1.25
MCF2L-226ENST00000486210 ZNF408Q9H9D4 720 aa22.85■■□□□ 1.25
MCF2L-226ENST00000486210 HCLS1P14317 486 aaPredicted RBP22.84■■□□□ 1.25
MCF2L-226ENST00000486210 ZC3H15Q8WU90 426 aaKnown RBP22.84■■□□□ 1.25
MCF2L-226ENST00000486210 TSPYL4Q9UJ04 414 aa22.84■■□□□ 1.25
MCF2L-226ENST00000486210 DDX60Q8IY21 1712 aaKnown RBP22.83■■□□□ 1.25
MCF2L-226ENST00000486210 CA12O43570 354 aa22.83■■□□□ 1.25
MCF2L-226ENST00000486210 NLRP10Q86W26 655 aa22.83■■□□□ 1.25
MCF2L-226ENST00000486210 ZIC5Q96T25 663 aa22.83■■□□□ 1.25
MCF2L-226ENST00000486210 BCL2L13Q9BXK5 485 aa22.83■■□□□ 1.25
MCF2L-226ENST00000486210 POLR2AP24928 1970 aaKnown RBP22.82■■□□□ 1.24
MCF2L-226ENST00000486210 DLK2Q6UY11 383 aa22.82■■□□□ 1.24
MCF2L-226ENST00000486210 CDC37L1Q7L3B6 337 aa22.82■■□□□ 1.24
MCF2L-226ENST00000486210 CNOT7Q9UIV1 285 aaKnown RBP22.82■■□□□ 1.24
MCF2L-226ENST00000486210 GRAPQ13588 217 aa22.81■■□□□ 1.24
MCF2L-226ENST00000486210 TNIP1Q15025 636 aa22.81■■□□□ 1.24
MCF2L-226ENST00000486210 GRAPLQ8TC17 118 aaPredicted RBP22.81■■□□□ 1.24
MCF2L-226ENST00000486210 COL4A1P02462 1669 aa22.81■■□□□ 1.24
MCF2L-226ENST00000486210 CCDC27Q2M243 656 aa22.8■■□□□ 1.24
MCF2L-226ENST00000486210 COPS6Q7L5N1 327 aa22.8■■□□□ 1.24
MCF2L-226ENST00000486210 NCBP3Q53F19 620 aaKnown RBP22.79■■□□□ 1.24
MCF2L-226ENST00000486210 DDX46Q7L014 1031 aaKnown RBP22.79■■□□□ 1.24
MCF2L-226ENST00000486210 WWC1Q8IX03 1113 aa22.79■■□□□ 1.24
MCF2L-226ENST00000486210 MICALL2Q8IY33 904 aa22.79■■□□□ 1.24
MCF2L-226ENST00000486210 BABAM1Q9NWV8 329 aa22.79■■□□□ 1.24
MCF2L-226ENST00000486210 ZBTB12Q9Y330 459 aaPredicted RBP22.79■■□□□ 1.24
MCF2L-226ENST00000486210 AIMP1Q12904 312 aaKnown RBP22.78■■□□□ 1.24
MCF2L-226ENST00000486210 HSP90AB3PQ58FF7 597 aa22.78■■□□□ 1.24
MCF2L-226ENST00000486210 USP48Q86UV5 1035 aa22.78■■□□□ 1.24
MCF2L-226ENST00000486210 XAGE3Q8WTP9 111 aa22.78■■□□□ 1.24
MCF2L-226ENST00000486210 NECTIN2Q92692 538 aa22.78■■□□□ 1.24
MCF2L-226ENST00000486210 TRMT112Q9UI30 125 aaKnown RBP22.78■■□□□ 1.24
MCF2L-226ENST00000486210 HNRNPUQ00839 825 aaKnown RBP eCLIP22.77■■□□□ 1.24
MCF2L-226ENST00000486210 TCIRG1Q13488 830 aa22.77■■□□□ 1.24
MCF2L-226ENST00000486210 DGKZQ13574 1117 aa22.77■■□□□ 1.24
MCF2L-226ENST00000486210 SH3TC1Q8TE82 1336 aa22.77■■□□□ 1.24
MCF2L-226ENST00000486210 EGFRP00533 1210 aa22.76■■□□□ 1.23
MCF2L-226ENST00000486210 HUNKP57058 714 aa22.76■■□□□ 1.23
MCF2L-226ENST00000486210 NOGQ13253 232 aa22.76■■□□□ 1.23
MCF2L-226ENST00000486210 SAMD7Q7Z3H4 446 aa22.76■■□□□ 1.23
MCF2L-226ENST00000486210 ZNF428Q96B54 188 aa22.76■■□□□ 1.23
MCF2L-226ENST00000486210 CFAP44Q96MT7 982 aa22.76■■□□□ 1.23
MCF2L-226ENST00000486210 FAM155AB1AL88 458 aaPredicted RBP22.75■■□□□ 1.23
MCF2L-226ENST00000486210 H7C1D1 291 aa22.75■■□□□ 1.23
MCF2L-226ENST00000486210 PSMD14O00487 310 aa22.75■■□□□ 1.23
MCF2L-226ENST00000486210 DPF2Q92785 391 aa22.74■■□□□ 1.23
MCF2L-226ENST00000486210 DBNDD1Q9H9R9 158 aa22.74■■□□□ 1.23
MCF2L-226ENST00000486210 ZNF521Q96K83 1311 aa22.74■■□□□ 1.23
MCF2L-226ENST00000486210 KRT24Q2M2I5 525 aa22.73■■□□□ 1.23
MCF2L-226ENST00000486210 TBC1D10BQ4KMP7 808 aaPredicted RBP22.73■■□□□ 1.23
MCF2L-226ENST00000486210 TMC4Q7Z404 712 aa22.73■■□□□ 1.23
MCF2L-226ENST00000486210 CELF1Q92879 486 aaKnown RBP22.73■■□□□ 1.23
MCF2L-226ENST00000486210 SCN9AQ15858 1988 aa22.72■■□□□ 1.23
MCF2L-226ENST00000486210 WASHC4Q2M389 1173 aa22.72■■□□□ 1.23
MCF2L-226ENST00000486210 KCNQ5Q9NR82 932 aa22.72■■□□□ 1.23
MCF2L-226ENST00000486210 LAS1LQ9Y4W2 734 aaKnown RBP22.72■■□□□ 1.23
MCF2L-226ENST00000486210 RGMBQ6NW40 437 aa22.71■■□□□ 1.23
MCF2L-226ENST00000486210 KRT26Q7Z3Y9 468 aa22.71■■□□□ 1.23
MCF2L-226ENST00000486210 POLLQ9UGP5 575 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms