RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 DCAF5Q96JK2 942 aa9.07□□□□□ -0.96
SMARCC1-207ENST00000485833 M0R082 166 aa9.06□□□□□ -0.96
SMARCC1-207ENST00000485833 PHLDB3Q6NSJ2 640 aa9.06□□□□□ -0.96
SMARCC1-207ENST00000485833 DHX32Q7L7V1 743 aaKnown RBP9.06□□□□□ -0.96
SMARCC1-207ENST00000485833 ALYREFQ86V81 257 aaKnown RBP9.06□□□□□ -0.96
SMARCC1-207ENST00000485833 ZNF417Q8TAU3 575 aa9.06□□□□□ -0.96
SMARCC1-207ENST00000485833 PIK3R5Q8WYR1 880 aa9.06□□□□□ -0.96
SMARCC1-207ENST00000485833 ZNF587Q96SQ5 575 aaPredicted RBP9.06□□□□□ -0.96
SMARCC1-207ENST00000485833 SUV39H2Q9H5I1 410 aa9.06□□□□□ -0.96
SMARCC1-207ENST00000485833 NOP53Q9NZM5 478 aaKnown RBP9.06□□□□□ -0.96
SMARCC1-207ENST00000485833 ZBTB39O15060 712 aa9.05□□□□□ -0.96
SMARCC1-207ENST00000485833 COL8A1P27658 744 aa9.05□□□□□ -0.96
SMARCC1-207ENST00000485833 TRIP4Q15650 581 aaPredicted RBP9.05□□□□□ -0.96
SMARCC1-207ENST00000485833 PCSK7Q16549 785 aa9.05□□□□□ -0.96
SMARCC1-207ENST00000485833 MICALL1Q8N3F8 863 aa9.05□□□□□ -0.96
SMARCC1-207ENST00000485833 KCTD17Q8N5Z5 321 aa9.05□□□□□ -0.96
SMARCC1-207ENST00000485833 GTF3C2Q8WUA4 911 aaPredicted RBP9.05□□□□□ -0.96
SMARCC1-207ENST00000485833 PRDM6Q9NQX0 595 aa9.05□□□□□ -0.96
SMARCC1-207ENST00000485833 B4GALNT3Q6L9W6 998 aa9.04□□□□□ -0.96
SMARCC1-207ENST00000485833 C20orf204Q6ZNR8 217 aa9.04□□□□□ -0.96
SMARCC1-207ENST00000485833 TRIM11Q96F44 468 aa9.04□□□□□ -0.96
SMARCC1-207ENST00000485833 NAGPAQ9UK23 515 aa9.04□□□□□ -0.96
SMARCC1-207ENST00000485833 MTMR7Q9Y216 660 aa9.04□□□□□ -0.96
SMARCC1-207ENST00000485833 ARID4AP29374 1257 aaPredicted RBP9.03□□□□□ -0.96
SMARCC1-207ENST00000485833 GPLD1P80108 840 aa9.03□□□□□ -0.96
SMARCC1-207ENST00000485833 RETREG2Q8NC44 543 aa9.03□□□□□ -0.96
SMARCC1-207ENST00000485833 TRPM4Q8TD43 1214 aa9.03□□□□□ -0.96
SMARCC1-207ENST00000485833 GPR152Q8TDT2 470 aa9.03□□□□□ -0.96
SMARCC1-207ENST00000485833 UBAP1LF5GYI3 381 aa9.02□□□□□ -0.97
SMARCC1-207ENST00000485833 COL9A3Q14050 684 aaPredicted RBP9.02□□□□□ -0.97
SMARCC1-207ENST00000485833 C8orf86Q6ZUL3 223 aa9.02□□□□□ -0.97
SMARCC1-207ENST00000485833 TLR7Q9NYK1 1049 aaKnown RBP9.02□□□□□ -0.97
SMARCC1-207ENST00000485833 ZBTB42B2RXF5 422 aa9.01□□□□□ -0.97
SMARCC1-207ENST00000485833 LILRB5O75023 590 aa9.01□□□□□ -0.97
SMARCC1-207ENST00000485833 MPSTP25325 297 aa9.01□□□□□ -0.97
SMARCC1-207ENST00000485833 NRLP54845 237 aa9.01□□□□□ -0.97
SMARCC1-207ENST00000485833 PSAPL1Q6NUJ1 521 aa9.01□□□□□ -0.97
SMARCC1-207ENST00000485833 FAM35AQ86V20 835 aa9.01□□□□□ -0.97
SMARCC1-207ENST00000485833 NLRP13Q86W25 1043 aa9.01□□□□□ -0.97
SMARCC1-207ENST00000485833 ATCAYQ86WG3 371 aa9.01□□□□□ -0.97
SMARCC1-207ENST00000485833 PLVAPQ9BX97 442 aa9.01□□□□□ -0.97
SMARCC1-207ENST00000485833 JPH1Q9HDC5 661 aaPredicted RBP9.01□□□□□ -0.97
SMARCC1-207ENST00000485833 FNDC3AQ9Y2H6 1198 aaKnown RBP9.01□□□□□ -0.97
SMARCC1-207ENST00000485833 SPDYE3A6NKU9 549 aa9□□□□□ -0.97
SMARCC1-207ENST00000485833 MMP20O60882 483 aa9□□□□□ -0.97
SMARCC1-207ENST00000485833 PSAPP07602 524 aa9□□□□□ -0.97
SMARCC1-207ENST00000485833 NID1P14543 1247 aa9□□□□□ -0.97
SMARCC1-207ENST00000485833 CPB1P15086 417 aa9□□□□□ -0.97
SMARCC1-207ENST00000485833 MLLT1Q03111 559 aaPredicted RBP9□□□□□ -0.97
SMARCC1-207ENST00000485833 PLA2G4EQ3MJ16 856 aa9□□□□□ -0.97
SMARCC1-207ENST00000485833 NOM1Q5C9Z4 860 aaKnown RBP9□□□□□ -0.97
SMARCC1-207ENST00000485833 KRBA1A5PL33 1030 aa8.99□□□□□ -0.97
SMARCC1-207ENST00000485833 HOXD8P13378 290 aaPredicted RBP8.99□□□□□ -0.97
SMARCC1-207ENST00000485833 SOX18P35713 384 aa8.99□□□□□ -0.97
SMARCC1-207ENST00000485833 EIF1AXP47813 144 aaKnown RBP8.99□□□□□ -0.97
SMARCC1-207ENST00000485833 PLAURQ03405 335 aa8.99□□□□□ -0.97
SMARCC1-207ENST00000485833 MTMR3Q13615 1198 aa8.99□□□□□ -0.97
SMARCC1-207ENST00000485833 NUDT8Q8WV74 236 aa8.99□□□□□ -0.97
SMARCC1-207ENST00000485833 NUDT16Q96DE0 195 aaKnown RBP8.99□□□□□ -0.97
SMARCC1-207ENST00000485833 FRRS1LQ9P0K9 344 aa8.99□□□□□ -0.97
SMARCC1-207ENST00000485833 RGS9O75916 674 aaPredicted RBP8.98□□□□□ -0.97
SMARCC1-207ENST00000485833 NPR3P17342 541 aa8.98□□□□□ -0.97
SMARCC1-207ENST00000485833 PDE4CQ08493 712 aa8.98□□□□□ -0.97
SMARCC1-207ENST00000485833 SF3B2Q13435 895 aaKnown RBP8.98□□□□□ -0.97
SMARCC1-207ENST00000485833 GPAT2Q6NUI2 795 aa8.98□□□□□ -0.97
SMARCC1-207ENST00000485833 LPIN3Q9BQK8 851 aa8.98□□□□□ -0.97
SMARCC1-207ENST00000485833 ABL1P00519 1130 aa8.97□□□□□ -0.97
SMARCC1-207ENST00000485833 ITGB2P05107 769 aa8.97□□□□□ -0.97
SMARCC1-207ENST00000485833 PERM1Q5SV97 790 aa8.97□□□□□ -0.97
SMARCC1-207ENST00000485833 ALKBH2Q6NS38 261 aa8.97□□□□□ -0.97
SMARCC1-207ENST00000485833 EDEM1Q92611 657 aa8.97□□□□□ -0.97
SMARCC1-207ENST00000485833 FAM13AO94988 1023 aa8.96□□□□□ -0.98
SMARCC1-207ENST00000485833 IGHA1P01876 353 aa8.96□□□□□ -0.98
SMARCC1-207ENST00000485833 RPLP1P05386 114 aaKnown RBP8.96□□□□□ -0.98
SMARCC1-207ENST00000485833 SPATA31C1P0DKV0 1188 aa8.96□□□□□ -0.98
SMARCC1-207ENST00000485833 EIF2AK2P19525 551 aaKnown RBP8.96□□□□□ -0.98
SMARCC1-207ENST00000485833 AFF1P51825 1210 aaKnown RBP8.96□□□□□ -0.98
SMARCC1-207ENST00000485833 DNM1Q05193 864 aaKnown RBP8.96□□□□□ -0.98
SMARCC1-207ENST00000485833 ZNF211Q13398 564 aaPredicted RBP8.96□□□□□ -0.98
SMARCC1-207ENST00000485833 PDE12Q6L8Q7 609 aaKnown RBP8.96□□□□□ -0.98
SMARCC1-207ENST00000485833 ELMSAN1Q6PJG2 1045 aa8.96□□□□□ -0.98
SMARCC1-207ENST00000485833 HFE2Q6ZVN8 426 aa8.96□□□□□ -0.98
SMARCC1-207ENST00000485833 OR13H1Q8NG92 308 aa8.96□□□□□ -0.98
SMARCC1-207ENST00000485833 NSUN5Q96P11 429 aaKnown RBP8.96□□□□□ -0.98
SMARCC1-207ENST00000485833 PDGFAP04085 211 aa8.95□□□□□ -0.98
SMARCC1-207ENST00000485833 PCSK2P16519 638 aa8.95□□□□□ -0.98
SMARCC1-207ENST00000485833 MZF1P28698 734 aaPredicted RBP8.95□□□□□ -0.98
SMARCC1-207ENST00000485833 FKBP4Q02790 459 aaKnown RBP eCLIP8.95□□□□□ -0.98
SMARCC1-207ENST00000485833 PRRT3Q5FWE3 981 aa8.95□□□□□ -0.98
SMARCC1-207ENST00000485833 ABI2Q9NYB9 513 aaPredicted RBP8.95□□□□□ -0.98
SMARCC1-207ENST00000485833 EGFL7Q9UHF1 273 aa8.95□□□□□ -0.98
SMARCC1-207ENST00000485833 LOC102724428A0A0B4J2F2 783 aa8.94□□□□□ -0.98
SMARCC1-207ENST00000485833 SIK1P57059 783 aa8.94□□□□□ -0.98
SMARCC1-207ENST00000485833 TTC39BQ5VTQ0 682 aaPredicted RBP8.94□□□□□ -0.98
SMARCC1-207ENST00000485833 TTC9Q92623 222 aa8.94□□□□□ -0.98
SMARCC1-207ENST00000485833 SMG9Q9H0W8 520 aaKnown RBP8.94□□□□□ -0.98
SMARCC1-207ENST00000485833 ANO2Q9NQ90 1003 aa8.94□□□□□ -0.98
SMARCC1-207ENST00000485833 FAM229AH3BQW9 127 aa8.93□□□□□ -0.98
SMARCC1-207ENST00000485833 J3QW42 95 aa8.93□□□□□ -0.98
SMARCC1-207ENST00000485833 GHRHP01286 108 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms